RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 CHAF1AQ13111 956 aaPredicted RBP14.76□□□□□ -0.05
GCN1-201ENST00000300648 CFAP44Q96MT7 982 aa14.74□□□□□ -0.05
GCN1-201ENST00000300648 DDX10Q13206 875 aaKnown RBP14.73□□□□□ -0.05
GCN1-201ENST00000300648 CDCA8Q53HL2 280 aa14.73□□□□□ -0.05
GCN1-201ENST00000300648 DNTTIP2Q5QJE6 756 aaKnown RBP14.73□□□□□ -0.05
GCN1-201ENST00000300648 L1TD1Q5T7N2 865 aaKnown RBP14.72□□□□□ -0.05
GCN1-201ENST00000300648 PTMSP20962 102 aa14.72□□□□□ -0.05
GCN1-201ENST00000300648 TSPY4P0CV99 314 aa14.71□□□□□ -0.05
GCN1-201ENST00000300648 TSPY10P0CW01 314 aa14.71□□□□□ -0.05
GCN1-201ENST00000300648 MS4A1P11836 297 aa14.7□□□□□ -0.06
GCN1-201ENST00000300648 EIF4G2P78344 907 aaKnown RBP eCLIP14.69□□□□□ -0.06
GCN1-201ENST00000300648 MTUS2Q5JR59 1369 aa14.69□□□□□ -0.06
GCN1-201ENST00000300648 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
GCN1-201ENST00000300648 GOLGA3Q08378 1498 aa14.68□□□□□ -0.06
GCN1-201ENST00000300648 ARXQ96QS3 562 aa14.66□□□□□ -0.06
GCN1-201ENST00000300648 ZNF777Q9ULD5 760 aaPredicted RBP14.65□□□□□ -0.06
GCN1-201ENST00000300648 NAP1L5Q96NT1 182 aaPredicted RBP14.65□□□□□ -0.06
GCN1-201ENST00000300648 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
GCN1-201ENST00000300648 CFAP53Q96M91 514 aa14.64□□□□□ -0.07
GCN1-201ENST00000300648 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
GCN1-201ENST00000300648 CLIP1P30622 1438 aa14.64□□□□□ -0.07
GCN1-201ENST00000300648 NOP58Q9Y2X3 529 aaKnown RBP14.63□□□□□ -0.07
GCN1-201ENST00000300648 PPP4R2Q9NY27 417 aa14.6□□□□□ -0.07
GCN1-201ENST00000300648 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
GCN1-201ENST00000300648 FTSJ3Q8IY81 847 aaKnown RBP14.59□□□□□ -0.07
GCN1-201ENST00000300648 ARID4BQ4LE39 1312 aaPredicted RBP14.59□□□□□ -0.07
GCN1-201ENST00000300648 KIF27Q86VH2 1401 aa14.59□□□□□ -0.07
GCN1-201ENST00000300648 MSNP26038 577 aaKnown RBP14.58□□□□□ -0.07
GCN1-201ENST00000300648 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.07
GCN1-201ENST00000300648 USP35Q9P2H5 1018 aa14.57□□□□□ -0.08
GCN1-201ENST00000300648 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
GCN1-201ENST00000300648 PNNQ9H307 717 aaKnown RBP14.55□□□□□ -0.08
GCN1-201ENST00000300648 MIER1Q8N108 512 aa14.52□□□□□ -0.08
GCN1-201ENST00000300648 KNSTRNQ9Y448 316 aa14.52□□□□□ -0.09
GCN1-201ENST00000300648 HAP1P54257 671 aaPredicted RBP14.51□□□□□ -0.09
GCN1-201ENST00000300648 CHMP7Q8WUX9 453 aaPredicted RBP14.51□□□□□ -0.09
GCN1-201ENST00000300648 CHGAP10645 457 aaKnown RBP14.5□□□□□ -0.09
GCN1-201ENST00000300648 HSCBQ8IWL3 235 aa14.5□□□□□ -0.09
GCN1-201ENST00000300648 TIMELESSQ9UNS1 1208 aa14.5□□□□□ -0.09
GCN1-201ENST00000300648 P3H3Q8IVL6 736 aa14.5□□□□□ -0.09
GCN1-201ENST00000300648 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
GCN1-201ENST00000300648 MCCP23508 829 aa14.49□□□□□ -0.09
GCN1-201ENST00000300648 SALL2Q9Y467 1007 aaPredicted RBP14.49□□□□□ -0.09
GCN1-201ENST00000300648 WRNQ14191 1432 aaPredicted RBP eCLIP14.47□□□□□ -0.09
GCN1-201ENST00000300648 PLEKHD1A6NEE1 506 aa14.46□□□□□ -0.09
GCN1-201ENST00000300648 GOLGA6L4A6NEF3 574 aa14.46□□□□□ -0.1
GCN1-201ENST00000300648 SYAP1Q96A49 352 aaPredicted RBP14.45□□□□□ -0.1
GCN1-201ENST00000300648 NUDCQ9Y266 331 aa14.45□□□□□ -0.1
GCN1-201ENST00000300648 KIAA2012Q0VF49 1180 aa14.44□□□□□ -0.1
GCN1-201ENST00000300648 MAPK8IP3Q9UPT6 1336 aa14.44□□□□□ -0.1
GCN1-201ENST00000300648 GBP4Q96PP9 640 aa14.44□□□□□ -0.1
GCN1-201ENST00000300648 TNIKQ9UKE5 1360 aa14.43□□□□□ -0.1
GCN1-201ENST00000300648 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
GCN1-201ENST00000300648 HTATSF1O43719 755 aaKnown RBP14.42□□□□□ -0.1
GCN1-201ENST00000300648 MYO15BQ96JP2 1530 aa14.42□□□□□ -0.1
GCN1-201ENST00000300648 CEP162Q5TB80 1403 aa14.4□□□□□ -0.1
GCN1-201ENST00000300648 CHMP4AQ9BY43 222 aa14.4□□□□□ -0.1
GCN1-201ENST00000300648 CCER2I3L3R5 266 aa14.39□□□□□ -0.11
GCN1-201ENST00000300648 FGD1P98174 961 aa14.38□□□□□ -0.11
GCN1-201ENST00000300648 CCDC34Q96HJ3 373 aa14.38□□□□□ -0.11
GCN1-201ENST00000300648 IRX6P78412 446 aaPredicted RBP14.37□□□□□ -0.11
GCN1-201ENST00000300648 HDGFP51858 240 aaKnown RBP14.37□□□□□ -0.11
GCN1-201ENST00000300648 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
GCN1-201ENST00000300648 KANK1Q14678 1352 aa14.36□□□□□ -0.11
GCN1-201ENST00000300648 ARID3CA6NKF2 412 aa14.35□□□□□ -0.11
GCN1-201ENST00000300648 GOLGA6L1Q8N7Z2 621 aa14.35□□□□□ -0.11
GCN1-201ENST00000300648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.35□□□□□ -0.115e-7■■□□□ 12.3
GCN1-201ENST00000300648 KDM2AQ9Y2K7 1162 aa14.35□□□□□ -0.11
GCN1-201ENST00000300648 PPP1R15AO75807 674 aaPredicted RBP14.34□□□□□ -0.11
GCN1-201ENST00000300648 PHF14O94880 888 aa14.34□□□□□ -0.11
GCN1-201ENST00000300648 DRC7Q8IY82 874 aa14.34□□□□□ -0.11
GCN1-201ENST00000300648 CSPP1Q1MSJ5 1256 aa14.34□□□□□ -0.11
GCN1-201ENST00000300648 KCNJ4P48050 445 aa14.33□□□□□ -0.11
GCN1-201ENST00000300648 TNNT3P45378 269 aaPredicted RBP14.33□□□□□ -0.12
GCN1-201ENST00000300648 DEKP35659 375 aaKnown RBP14.33□□□□□ -0.12
GCN1-201ENST00000300648 LAS1LQ9Y4W2 734 aaKnown RBP14.33□□□□□ -0.12
GCN1-201ENST00000300648 PLCB2Q00722 1185 aa14.33□□□□□ -0.12
GCN1-201ENST00000300648 TPM4P67936 248 aa14.33□□□□□ -0.12
GCN1-201ENST00000300648 CHIC2Q9UKJ5 165 aa14.32□□□□□ -0.12
GCN1-201ENST00000300648 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
GCN1-201ENST00000300648 RSPH6AQ9H0K4 717 aa14.29□□□□□ -0.12
GCN1-201ENST00000300648 TCERG1O14776 1098 aaKnown RBP14.29□□□□□ -0.12
GCN1-201ENST00000300648 CFDP1Q9UEE9 299 aaPredicted RBP14.29□□□□□ -0.12
GCN1-201ENST00000300648 IPO8O15397 1037 aaKnown RBP14.29□□□□□ -0.12
GCN1-201ENST00000300648 CARD11Q9BXL7 1154 aa14.28□□□□□ -0.12
GCN1-201ENST00000300648 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
GCN1-201ENST00000300648 OS9Q13438 667 aaPredicted RBP14.28□□□□□ -0.12
GCN1-201ENST00000300648 RGS3P49796 1198 aa14.27□□□□□ -0.12
GCN1-201ENST00000300648 SETQ01105 290 aaPredicted RBP14.26□□□□□ -0.13
GCN1-201ENST00000300648 PHLDB1Q86UU1 1377 aa14.25□□□□□ -0.13
GCN1-201ENST00000300648 CALRP27797 417 aaKnown RBP14.25□□□□□ -0.13
GCN1-201ENST00000300648 HDAC5Q9UQL6 1122 aa14.25□□□□□ -0.13
GCN1-201ENST00000300648 NOC3LQ8WTT2 800 aaKnown RBP14.25□□□□□ -0.13
GCN1-201ENST00000300648 KIAA1211Q6ZU35 1233 aa14.24□□□□□ -0.13
GCN1-201ENST00000300648 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
GCN1-201ENST00000300648 CARMIL2Q6F5E8 1435 aa14.23□□□□□ -0.13
GCN1-201ENST00000300648 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
GCN1-201ENST00000300648 CHMP4CQ96CF2 233 aa14.23□□□□□ -0.13
GCN1-201ENST00000300648 CCNB3Q8WWL7 1395 aa14.23□□□□□ -0.13
GCN1-201ENST00000300648 GNL2Q13823 731 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms