RNA–Protein interactions for RNA: ENST00000300305.7

RUNX1-201, Transcript of runt related transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX1, Length 6,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-201ENST00000300305 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.74■■□□□ 1.07
RUNX1-201ENST00000300305 NCLP19338 710 aaKnown RBP21.7■■□□□ 1.06
RUNX1-201ENST00000300305 CDK11BP21127 795 aaKnown RBP21.6■■□□□ 1.05
RUNX1-201ENST00000300305 MYH16Q9H6N6 1097 aa21.58■■□□□ 1.05
RUNX1-201ENST00000300305 LAS1LQ9Y4W2 734 aaKnown RBP21.56■■□□□ 1.04
RUNX1-201ENST00000300305 RRP7BPQ9NSQ0 103 aa21.56■■□□□ 1.04
RUNX1-201ENST00000300305 PPM1GO15355 546 aaPredicted RBP21.56■■□□□ 1.04
RUNX1-201ENST00000300305 NPM1P06748 294 aaKnown RBP eCLIP21.56■■□□□ 1.04
RUNX1-201ENST00000300305 TRIM44Q96DX7 344 aaPredicted RBP21.53■■□□□ 1.04
RUNX1-201ENST00000300305 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
RUNX1-201ENST00000300305 NEUROD2Q15784 382 aa21.52■■□□□ 1.03
RUNX1-201ENST00000300305 PTMAP06454 111 aaKnown RBP21.47■■□□□ 1.03
RUNX1-201ENST00000300305 AMER1Q5JTC6 1135 aaPredicted RBP21.46■■□□□ 1.03
RUNX1-201ENST00000300305 PLCB2Q00722 1185 aa21.46■■□□□ 1.03
RUNX1-201ENST00000300305 SUPT16HQ9Y5B9 1047 aaKnown RBP21.46■■□□□ 1.03
RUNX1-201ENST00000300305 DNTTIP2Q5QJE6 756 aaKnown RBP21.45■■□□□ 1.03
RUNX1-201ENST00000300305 KCNH8Q96L42 1107 aa21.44■■□□□ 1.02
RUNX1-201ENST00000300305 TNNT2P45379 298 aaPredicted RBP21.43■■□□□ 1.02
RUNX1-201ENST00000300305 MTUS2Q5JR59 1369 aa21.41■■□□□ 1.02
RUNX1-201ENST00000300305 TSPY4P0CV99 314 aa21.4■■□□□ 1.02
RUNX1-201ENST00000300305 TSPY10P0CW01 314 aa21.4■■□□□ 1.02
RUNX1-201ENST00000300305 RGS3P49796 1198 aa21.39■■□□□ 1.02
RUNX1-201ENST00000300305 NAP1L5Q96NT1 182 aaPredicted RBP21.39■■□□□ 1.01
RUNX1-201ENST00000300305 BECN1Q14457 450 aa21.38■■□□□ 1.01
RUNX1-201ENST00000300305 CHMP7Q8WUX9 453 aaPredicted RBP21.37■■□□□ 1.01
RUNX1-201ENST00000300305 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
RUNX1-201ENST00000300305 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
RUNX1-201ENST00000300305 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
RUNX1-201ENST00000300305 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
RUNX1-201ENST00000300305 SPRYD3Q8NCJ5 442 aa21.36■■□□□ 1.01
RUNX1-201ENST00000300305 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
RUNX1-201ENST00000300305 DDRGK1Q96HY6 314 aa21.33■■□□□ 1.01
RUNX1-201ENST00000300305 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 14e-7■■■■■ 35.9
RUNX1-201ENST00000300305 FRAT1Q92837 279 aaPredicted RBP21.33■■□□□ 1
RUNX1-201ENST00000300305 LMOD2Q6P5Q4 547 aa21.31■■□□□ 1
RUNX1-201ENST00000300305 FTSJ3Q8IY81 847 aaKnown RBP21.3■■□□□ 1
RUNX1-201ENST00000300305 NAP1L2Q9ULW6 460 aaPredicted RBP21.29■■□□□ 1
RUNX1-201ENST00000300305 ZRSR1Q15695 479 aaKnown RBP21.29■■□□□ 1
RUNX1-201ENST00000300305 GOLGA6L22H0YM25 854 aa21.28■■□□□ 1
RUNX1-201ENST00000300305 CC2D1BQ5T0F9 858 aaKnown RBP21.27■□□□□ 0.99
RUNX1-201ENST00000300305 CLIP1P30622 1438 aa21.26■□□□□ 0.99
RUNX1-201ENST00000300305 ZCCHC6Q5VYS8 1495 aaKnown RBP21.25■□□□□ 0.99
RUNX1-201ENST00000300305 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
RUNX1-201ENST00000300305 ANP32EQ9BTT0 268 aa21.23■□□□□ 0.99
RUNX1-201ENST00000300305 ARID3AQ99856 593 aa21.23■□□□□ 0.99
RUNX1-201ENST00000300305 B4GALNT3Q6L9W6 998 aa21.22■□□□□ 0.99
RUNX1-201ENST00000300305 SOX12O15370 315 aa21.22■□□□□ 0.99
RUNX1-201ENST00000300305 CASC1Q6TDU7 716 aa21.17■□□□□ 0.98
RUNX1-201ENST00000300305 NPHP1O15259 732 aa21.17■□□□□ 0.98
RUNX1-201ENST00000300305 SIN3AQ96ST3 1273 aa21.16■□□□□ 0.98
RUNX1-201ENST00000300305 KNSTRNQ9Y448 316 aa21.16■□□□□ 0.98
RUNX1-201ENST00000300305 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
RUNX1-201ENST00000300305 OS9Q13438 667 aaPredicted RBP21.14■□□□□ 0.97
RUNX1-201ENST00000300305 CARD11Q9BXL7 1154 aa21.13■□□□□ 0.97
RUNX1-201ENST00000300305 U2SURPO15042 1029 aaKnown RBP21.12■□□□□ 0.97
RUNX1-201ENST00000300305 CFAP53Q96M91 514 aa21.1■□□□□ 0.97
RUNX1-201ENST00000300305 NOP58Q9Y2X3 529 aaKnown RBP21.1■□□□□ 0.97
RUNX1-201ENST00000300305 FGD1P98174 961 aa21.1■□□□□ 0.97
RUNX1-201ENST00000300305 CLSTN1O94985 981 aa21.09■□□□□ 0.97
RUNX1-201ENST00000300305 APBB1O00213 710 aa21.08■□□□□ 0.97
RUNX1-201ENST00000300305 CEP162Q5TB80 1403 aa21.08■□□□□ 0.96
RUNX1-201ENST00000300305 MAPK8IP3Q9UPT6 1336 aa21.07■□□□□ 0.96
RUNX1-201ENST00000300305 PLEKHD1A6NEE1 506 aa21.07■□□□□ 0.96
RUNX1-201ENST00000300305 KCNJ4P48050 445 aa21.06■□□□□ 0.96
RUNX1-201ENST00000300305 ERICH6BQ5W0A0 696 aa21.06■□□□□ 0.96
RUNX1-201ENST00000300305 SAFB2Q14151 953 aaKnown RBP eCLIP21.05■□□□□ 0.963e-6■■■□□ 15.5
RUNX1-201ENST00000300305 POGKQ9P215 609 aa21■□□□□ 0.95
RUNX1-201ENST00000300305 CFDP1Q9UEE9 299 aaPredicted RBP21■□□□□ 0.95
RUNX1-201ENST00000300305 ZBTB4Q9P1Z0 1013 aaPredicted RBP21■□□□□ 0.95
RUNX1-201ENST00000300305 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
RUNX1-201ENST00000300305 ISY1Q9ULR0 285 aaKnown RBP20.99■□□□□ 0.95
RUNX1-201ENST00000300305 GZF1Q9H116 711 aaPredicted RBP20.97■□□□□ 0.95
RUNX1-201ENST00000300305 PPP4R2Q9NY27 417 aa20.96■□□□□ 0.95
RUNX1-201ENST00000300305 DRC7Q8IY82 874 aa20.96■□□□□ 0.95
RUNX1-201ENST00000300305 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
RUNX1-201ENST00000300305 DEKP35659 375 aaKnown RBP20.95■□□□□ 0.94
RUNX1-201ENST00000300305 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
RUNX1-201ENST00000300305 MLECQ14165 292 aa20.92■□□□□ 0.94
RUNX1-201ENST00000300305 ANO8Q9HCE9 1232 aaPredicted RBP20.91■□□□□ 0.94
RUNX1-201ENST00000300305 PDE4CQ08493 712 aa20.9■□□□□ 0.94
RUNX1-201ENST00000300305 GOLGA6L4A6NEF3 574 aa20.89■□□□□ 0.94
RUNX1-201ENST00000300305 HSCBQ8IWL3 235 aa20.88■□□□□ 0.93
RUNX1-201ENST00000300305 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
RUNX1-201ENST00000300305 NUDCQ9Y266 331 aa20.87■□□□□ 0.93
RUNX1-201ENST00000300305 GOLGA6L6A8MZA4 724 aa20.86■□□□□ 0.93
RUNX1-201ENST00000300305 ZNF330Q9Y3S2 320 aaPredicted RBP20.86■□□□□ 0.93
RUNX1-201ENST00000300305 MSNP26038 577 aaKnown RBP20.84■□□□□ 0.93
RUNX1-201ENST00000300305 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
RUNX1-201ENST00000300305 FOXD1Q16676 465 aa20.83■□□□□ 0.93
RUNX1-201ENST00000300305 SLKQ9H2G2 1235 aaPredicted RBP20.83■□□□□ 0.92
RUNX1-201ENST00000300305 FOXD4L1Q9NU39 408 aa20.82■□□□□ 0.92
RUNX1-201ENST00000300305 STK26Q9P289 416 aa20.82■□□□□ 0.92
RUNX1-201ENST00000300305 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
RUNX1-201ENST00000300305 SRPK2P78362 688 aaKnown RBP20.8■□□□□ 0.92
RUNX1-201ENST00000300305 CDCA8Q53HL2 280 aa20.79■□□□□ 0.92
RUNX1-201ENST00000300305 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
RUNX1-201ENST00000300305 NOL8Q76FK4 1167 aaKnown RBP20.78■□□□□ 0.92
RUNX1-201ENST00000300305 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
RUNX1-201ENST00000300305 KIF27Q86VH2 1401 aa20.77■□□□□ 0.92
RUNX1-201ENST00000300305 GNL2Q13823 731 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms