RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 TRIM44Q96DX7 344 aaPredicted RBP14.59□□□□□ -0.07
PBRM1-201ENST00000296302 GOLGA3Q08378 1498 aa14.59□□□□□ -0.07
PBRM1-201ENST00000296302 NOP58Q9Y2X3 529 aaKnown RBP14.57□□□□□ -0.08
PBRM1-201ENST00000296302 MTUS2Q5JR59 1369 aa14.57□□□□□ -0.08
PBRM1-201ENST00000296302 TNIKQ9UKE5 1360 aa14.53□□□□□ -0.08
PBRM1-201ENST00000296302 GOLGA6L22H0YM25 854 aa14.52□□□□□ -0.08
PBRM1-201ENST00000296302 KDM2AQ9Y2K7 1162 aa14.49□□□□□ -0.09
PBRM1-201ENST00000296302 MYH16Q9H6N6 1097 aa14.49□□□□□ -0.09
PBRM1-201ENST00000296302 TSPY4P0CV99 314 aa14.47□□□□□ -0.09
PBRM1-201ENST00000296302 TSPY10P0CW01 314 aa14.47□□□□□ -0.09
PBRM1-201ENST00000296302 CHGAP10645 457 aaKnown RBP14.47□□□□□ -0.09
PBRM1-201ENST00000296302 TNNT2P45379 298 aaPredicted RBP14.46□□□□□ -0.09
PBRM1-201ENST00000296302 RBM19Q9Y4C8 960 aaKnown RBP14.46□□□□□ -0.1
PBRM1-201ENST00000296302 RSF1Q96T23 1441 aaPredicted RBP14.46□□□□□ -0.1
PBRM1-201ENST00000296302 LAS1LQ9Y4W2 734 aaKnown RBP14.45□□□□□ -0.1
PBRM1-201ENST00000296302 NCLP19338 710 aaKnown RBP14.45□□□□□ -0.1
PBRM1-201ENST00000296302 CCER2I3L3R5 266 aa14.44□□□□□ -0.1
PBRM1-201ENST00000296302 DEKP35659 375 aaKnown RBP14.44□□□□□ -0.1
PBRM1-201ENST00000296302 RRP7BPQ9NSQ0 103 aa14.43□□□□□ -0.1
PBRM1-201ENST00000296302 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
PBRM1-201ENST00000296302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■■■□□ 19.2
PBRM1-201ENST00000296302 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
PBRM1-201ENST00000296302 CEP164Q9UPV0 1460 aa14.41□□□□□ -0.1
PBRM1-201ENST00000296302 NAP1L5Q96NT1 182 aaPredicted RBP14.41□□□□□ -0.1
PBRM1-201ENST00000296302 B4GALNT3Q6L9W6 998 aa14.39□□□□□ -0.11
PBRM1-201ENST00000296302 PTMAP06454 111 aaKnown RBP14.36□□□□□ -0.11
PBRM1-201ENST00000296302 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
PBRM1-201ENST00000296302 CDCA8Q53HL2 280 aa14.36□□□□□ -0.11
PBRM1-201ENST00000296302 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
PBRM1-201ENST00000296302 SIN3AQ96ST3 1273 aa14.35□□□□□ -0.11
PBRM1-201ENST00000296302 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
PBRM1-201ENST00000296302 KNSTRNQ9Y448 316 aa14.33□□□□□ -0.12
PBRM1-201ENST00000296302 L1TD1Q5T7N2 865 aaKnown RBP14.32□□□□□ -0.12
PBRM1-201ENST00000296302 CFAP53Q96M91 514 aa14.32□□□□□ -0.12
PBRM1-201ENST00000296302 RGS3P49796 1198 aa14.31□□□□□ -0.12
PBRM1-201ENST00000296302 DNTTIP2Q5QJE6 756 aaKnown RBP14.31□□□□□ -0.12
PBRM1-201ENST00000296302 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
PBRM1-201ENST00000296302 CCNB3Q8WWL7 1395 aa14.3□□□□□ -0.12
PBRM1-201ENST00000296302 ESF1Q9H501 851 aaKnown RBP14.3□□□□□ -0.12
PBRM1-201ENST00000296302 CASC1Q6TDU7 716 aa14.3□□□□□ -0.12
PBRM1-201ENST00000296302 FTSJ3Q8IY81 847 aaKnown RBP14.29□□□□□ -0.12
PBRM1-201ENST00000296302 SENP3-EIF4A1A0A087X0R7 540 aa14.28□□□□□ -0.12
PBRM1-201ENST00000296302 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
PBRM1-201ENST00000296302 MS4A1P11836 297 aa14.25□□□□□ -0.13
PBRM1-201ENST00000296302 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
PBRM1-201ENST00000296302 CHMP4BQ9H444 224 aaKnown RBP14.24□□□□□ -0.13
PBRM1-201ENST00000296302 HSP90AB1P08238 724 aaKnown RBP14.23□□□□□ -0.13
PBRM1-201ENST00000296302 RGL3Q3MIN7 710 aa14.23□□□□□ -0.13
PBRM1-201ENST00000296302 ZRSR1Q15695 479 aaKnown RBP14.21□□□□□ -0.13
PBRM1-201ENST00000296302 TCERG1O14776 1098 aaKnown RBP14.21□□□□□ -0.13
PBRM1-201ENST00000296302 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
PBRM1-201ENST00000296302 SETD5Q9C0A6 1442 aa14.19□□□□□ -0.14
PBRM1-201ENST00000296302 FRAT1Q92837 279 aaPredicted RBP14.19□□□□□ -0.14
PBRM1-201ENST00000296302 NPM1P06748 294 aaKnown RBP eCLIP14.19□□□□□ -0.14
PBRM1-201ENST00000296302 PLEKHD1A6NEE1 506 aa14.18□□□□□ -0.14
PBRM1-201ENST00000296302 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
PBRM1-201ENST00000296302 MSNP26038 577 aaKnown RBP14.18□□□□□ -0.14
PBRM1-201ENST00000296302 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
PBRM1-201ENST00000296302 VPS8Q8N3P4 1428 aa14.18□□□□□ -0.14
PBRM1-201ENST00000296302 IPO9Q96P70 1041 aaKnown RBP14.17□□□□□ -0.14
PBRM1-201ENST00000296302 NUDCQ9Y266 331 aa14.17□□□□□ -0.14
PBRM1-201ENST00000296302 MAPK8IP3Q9UPT6 1336 aa14.17□□□□□ -0.14
PBRM1-201ENST00000296302 NEUROD2Q15784 382 aa14.16□□□□□ -0.14
PBRM1-201ENST00000296302 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
PBRM1-201ENST00000296302 CDK11BP21127 795 aaKnown RBP14.15□□□□□ -0.14
PBRM1-201ENST00000296302 CC2D1BQ5T0F9 858 aaKnown RBP14.14□□□□□ -0.15
PBRM1-201ENST00000296302 PTMSP20962 102 aa14.13□□□□□ -0.15
PBRM1-201ENST00000296302 CHAF1AQ13111 956 aaPredicted RBP14.13□□□□□ -0.15
PBRM1-201ENST00000296302 CHMP7Q8WUX9 453 aaPredicted RBP14.13□□□□□ -0.15
PBRM1-201ENST00000296302 PNNQ9H307 717 aaKnown RBP14.12□□□□□ -0.15
PBRM1-201ENST00000296302 GOLGA6L6A8MZA4 724 aa14.12□□□□□ -0.15
PBRM1-201ENST00000296302 PLCB2Q00722 1185 aa14.12□□□□□ -0.15
PBRM1-201ENST00000296302 TMF1P82094 1093 aa14.12□□□□□ -0.15
PBRM1-201ENST00000296302 CFAP44Q96MT7 982 aa14.12□□□□□ -0.15
PBRM1-201ENST00000296302 RCAN3Q9UKA8 241 aa14.11□□□□□ -0.15
PBRM1-201ENST00000296302 SOGA1O94964 1423 aa14.1□□□□□ -0.15
PBRM1-201ENST00000296302 NRDCO43847 1150 aa14.1□□□□□ -0.15
PBRM1-201ENST00000296302 USP35Q9P2H5 1018 aa14.09□□□□□ -0.15
PBRM1-201ENST00000296302 GBP4Q96PP9 640 aa14.08□□□□□ -0.15
PBRM1-201ENST00000296302 TPRNQ4KMQ1 711 aa14.07□□□□□ -0.16
PBRM1-201ENST00000296302 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
PBRM1-201ENST00000296302 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
PBRM1-201ENST00000296302 RALBP1Q15311 655 aa14.06□□□□□ -0.16
PBRM1-201ENST00000296302 RAB3GAP2Q9H2M9 1393 aa14.06□□□□□ -0.16
PBRM1-201ENST00000296302 PPP1R15AO75807 674 aaPredicted RBP14.06□□□□□ -0.16
PBRM1-201ENST00000296302 BAZ1AQ9NRL2 1556 aaPredicted RBP14.04□□□□□ -0.16
PBRM1-201ENST00000296302 DCAF11Q8TEB1 546 aa14.04□□□□□ -0.16
PBRM1-201ENST00000296302 ARHGAP35Q9NRY4 1499 aa14.03□□□□□ -0.16
PBRM1-201ENST00000296302 GOLGA6L3A6NEY3 463 aa14.03□□□□□ -0.16
PBRM1-201ENST00000296302 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.03□□□□□ -0.16
PBRM1-201ENST00000296302 SPRYD3Q8NCJ5 442 aa14.03□□□□□ -0.16
PBRM1-201ENST00000296302 FANCIQ9NVI1 1328 aa14.02□□□□□ -0.16
PBRM1-201ENST00000296302 MCCP23508 829 aa14.02□□□□□ -0.16
PBRM1-201ENST00000296302 GOLGA6L4A6NEF3 574 aa14.02□□□□□ -0.17
PBRM1-201ENST00000296302 KANK4Q5T7N3 995 aaPredicted RBP14.01□□□□□ -0.17
PBRM1-201ENST00000296302 SLKQ9H2G2 1235 aaPredicted RBP14.01□□□□□ -0.17
PBRM1-201ENST00000296302 PDE3BQ13370 1112 aa14.01□□□□□ -0.17
PBRM1-201ENST00000296302 RWDD1Q9H446 243 aaPredicted RBP14.01□□□□□ -0.17
PBRM1-201ENST00000296302 NACADO15069 1562 aa14□□□□□ -0.17
PBRM1-201ENST00000296302 ARID4BQ4LE39 1312 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms