RNA–Protein interactions for RNA: ENST00000295887.5

CDS1-201, Transcript of CDP-diacylglycerol synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDS1, Length 4,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-201ENST00000295887 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
CDS1-201ENST00000295887 SENP3-EIF4A1A0A087X0R7 540 aa22.64■■□□□ 1.21
CDS1-201ENST00000295887 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
CDS1-201ENST00000295887 TMC1Q8TDI8 760 aa22.6■■□□□ 1.21
CDS1-201ENST00000295887 KDM2AQ9Y2K7 1162 aa22.6■■□□□ 1.21
CDS1-201ENST00000295887 CCDC136Q96JN2 1154 aa22.58■■□□□ 1.2
CDS1-201ENST00000295887 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
CDS1-201ENST00000295887 CUX2O14529 1486 aa22.52■■□□□ 1.2
CDS1-201ENST00000295887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.49■■□□□ 1.19
CDS1-201ENST00000295887 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
CDS1-201ENST00000295887 CARMIL1Q5VZK9 1371 aa22.48■■□□□ 1.19
CDS1-201ENST00000295887 NBR1Q14596 966 aa22.48■■□□□ 1.19
CDS1-201ENST00000295887 CANXP27824 592 aaKnown RBP22.48■■□□□ 1.19
CDS1-201ENST00000295887 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
CDS1-201ENST00000295887 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
CDS1-201ENST00000295887 RAPGEF2Q9Y4G8 1499 aa22.46■■□□□ 1.19
CDS1-201ENST00000295887 TSPY4P0CV99 314 aa22.43■■□□□ 1.18
CDS1-201ENST00000295887 TSPY10P0CW01 314 aa22.43■■□□□ 1.18
CDS1-201ENST00000295887 ANP32EQ9BTT0 268 aa22.43■■□□□ 1.18
CDS1-201ENST00000295887 RAB3GAP2Q9H2M9 1393 aa22.42■■□□□ 1.18
CDS1-201ENST00000295887 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
CDS1-201ENST00000295887 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
CDS1-201ENST00000295887 TDRD9Q8NDG6 1382 aaKnown RBP22.36■■□□□ 1.17
CDS1-201ENST00000295887 FHAD1B1AJZ9 1412 aa22.36■■□□□ 1.17
CDS1-201ENST00000295887 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
CDS1-201ENST00000295887 ZBTB47Q9UFB7 747 aaPredicted RBP22.34■■□□□ 1.17
CDS1-201ENST00000295887 DHX57Q6P158 1386 aaKnown RBP22.32■■□□□ 1.16
CDS1-201ENST00000295887 RGL3Q3MIN7 710 aa22.31■■□□□ 1.16
CDS1-201ENST00000295887 TIMELESSQ9UNS1 1208 aa22.3■■□□□ 1.16
CDS1-201ENST00000295887 CHGAP10645 457 aaKnown RBP22.29■■□□□ 1.16
CDS1-201ENST00000295887 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
CDS1-201ENST00000295887 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
CDS1-201ENST00000295887 B4GALNT3Q6L9W6 998 aa22.27■■□□□ 1.16
CDS1-201ENST00000295887 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
CDS1-201ENST00000295887 FOXD1Q16676 465 aa22.25■■□□□ 1.15
CDS1-201ENST00000295887 CCER2I3L3R5 266 aa22.25■■□□□ 1.15
CDS1-201ENST00000295887 PPP1R15AO75807 674 aaPredicted RBP22.24■■□□□ 1.15
CDS1-201ENST00000295887 TSHZ2Q9NRE2 1034 aa22.23■■□□□ 1.15
CDS1-201ENST00000295887 HSPA5P11021 654 aaKnown RBP22.22■■□□□ 1.15
CDS1-201ENST00000295887 RBM19Q9Y4C8 960 aaKnown RBP22.21■■□□□ 1.15
CDS1-201ENST00000295887 PLEKHD1A6NEE1 506 aa22.21■■□□□ 1.15
CDS1-201ENST00000295887 PPP4R2Q9NY27 417 aa22.21■■□□□ 1.15
CDS1-201ENST00000295887 CARD11Q9BXL7 1154 aa22.21■■□□□ 1.15
CDS1-201ENST00000295887 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
CDS1-201ENST00000295887 NPM1P06748 294 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDS1-201ENST00000295887 ARHGAP35Q9NRY4 1499 aa22.19■■□□□ 1.14
CDS1-201ENST00000295887 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
CDS1-201ENST00000295887 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
CDS1-201ENST00000295887 FHOD3Q2V2M9 1422 aa22.1■■□□□ 1.13
CDS1-201ENST00000295887 PDS5BQ9NTI5 1447 aa22.09■■□□□ 1.13
CDS1-201ENST00000295887 NEFMP07197 916 aa22.08■■□□□ 1.13
CDS1-201ENST00000295887 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.08■■□□□ 1.12
CDS1-201ENST00000295887 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
CDS1-201ENST00000295887 MPHOSPH9Q99550 1183 aa22.04■■□□□ 1.12
CDS1-201ENST00000295887 DCAF11Q8TEB1 546 aa22.02■■□□□ 1.11
CDS1-201ENST00000295887 L3MBTL2Q969R5 705 aa22.02■■□□□ 1.11
CDS1-201ENST00000295887 EIF5BO60841 1220 aaKnown RBP22■■□□□ 1.11
CDS1-201ENST00000295887 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
CDS1-201ENST00000295887 UPF2Q9HAU5 1272 aaKnown RBP21.99■■□□□ 1.11
CDS1-201ENST00000295887 CC2D1BQ5T0F9 858 aaKnown RBP21.98■■□□□ 1.11
CDS1-201ENST00000295887 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
CDS1-201ENST00000295887 FMN1Q68DA7 1419 aa21.97■■□□□ 1.11
CDS1-201ENST00000295887 ARXQ96QS3 562 aa21.97■■□□□ 1.11
CDS1-201ENST00000295887 PKD2Q13563 968 aa21.96■■□□□ 1.11
CDS1-201ENST00000295887 KIF21BO75037 1637 aa21.95■■□□□ 1.1
CDS1-201ENST00000295887 KNSTRNQ9Y448 316 aa21.94■■□□□ 1.1
CDS1-201ENST00000295887 NOP58Q9Y2X3 529 aaKnown RBP21.94■■□□□ 1.1
CDS1-201ENST00000295887 LAS1LQ9Y4W2 734 aaKnown RBP21.92■■□□□ 1.1
CDS1-201ENST00000295887 STAG3Q9UJ98 1225 aa21.9■■□□□ 1.1
CDS1-201ENST00000295887 NCAPD3P42695 1498 aa21.89■■□□□ 1.1
CDS1-201ENST00000295887 HSP90AA1P07900 732 aaKnown RBP21.89■■□□□ 1.1
CDS1-201ENST00000295887 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
CDS1-201ENST00000295887 IGF1RP08069 1367 aa21.88■■□□□ 1.09
CDS1-201ENST00000295887 NEUROD2Q15784 382 aa21.87■■□□□ 1.09
CDS1-201ENST00000295887 ESF1Q9H501 851 aaKnown RBP21.87■■□□□ 1.09
CDS1-201ENST00000295887 RGS3P49796 1198 aa21.85■■□□□ 1.09
CDS1-201ENST00000295887 FGD5Q6ZNL6 1462 aa21.84■■□□□ 1.09
CDS1-201ENST00000295887 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.08
CDS1-201ENST00000295887 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
CDS1-201ENST00000295887 ARAP1Q96P48 1450 aa21.81■■□□□ 1.08
CDS1-201ENST00000295887 DDRGK1Q96HY6 314 aa21.8■■□□□ 1.08
CDS1-201ENST00000295887 TNNT2P45379 298 aaPredicted RBP21.78■■□□□ 1.08
CDS1-201ENST00000295887 ERICH6BQ5W0A0 696 aa21.77■■□□□ 1.08
CDS1-201ENST00000295887 CDCA8Q53HL2 280 aa21.77■■□□□ 1.08
CDS1-201ENST00000295887 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
CDS1-201ENST00000295887 NUP155O75694 1391 aa21.76■■□□□ 1.07
CDS1-201ENST00000295887 PRKRIP1Q9H875 184 aaPredicted RBP21.75■■□□□ 1.07
CDS1-201ENST00000295887 NESP48681 1621 aa21.74■■□□□ 1.07
CDS1-201ENST00000295887 CCDC18Q5T9S5 1454 aa21.74■■□□□ 1.07
CDS1-201ENST00000295887 DEKP35659 375 aaKnown RBP21.74■■□□□ 1.07
CDS1-201ENST00000295887 TMF1P82094 1093 aa21.74■■□□□ 1.07
CDS1-201ENST00000295887 RTN4Q9NQC3 1192 aaKnown RBP21.74■■□□□ 1.07
CDS1-201ENST00000295887 FRAT1Q92837 279 aaPredicted RBP21.72■■□□□ 1.07
CDS1-201ENST00000295887 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
CDS1-201ENST00000295887 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
CDS1-201ENST00000295887 NUDCQ9Y266 331 aa21.71■■□□□ 1.07
CDS1-201ENST00000295887 RCAN3Q9UKA8 241 aa21.7■■□□□ 1.07
CDS1-201ENST00000295887 PPM1GO15355 546 aaPredicted RBP21.7■■□□□ 1.06
CDS1-201ENST00000295887 RRBP1Q9P2E9 1410 aaKnown RBP21.66■■□□□ 1.06
CDS1-201ENST00000295887 LRRC9Q6ZRR7 1453 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms