RNA–Protein interactions for RNA: ENST00000293379.8

ITGA5-201, Transcript of integrin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA5, Length 4,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-201ENST00000293379 TSHZ2Q9NRE2 1034 aa17.49■□□□□ 0.39
ITGA5-201ENST00000293379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.39
ITGA5-201ENST00000293379 RTN4Q9NQC3 1192 aaKnown RBP17.46■□□□□ 0.39
ITGA5-201ENST00000293379 RB1CC1Q8TDY2 1594 aa17.46■□□□□ 0.39
ITGA5-201ENST00000293379 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
ITGA5-201ENST00000293379 PPP4R2Q9NY27 417 aa17.45■□□□□ 0.38
ITGA5-201ENST00000293379 HSP90AA1P07900 732 aaKnown RBP17.44■□□□□ 0.38
ITGA5-201ENST00000293379 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
ITGA5-201ENST00000293379 KANK4Q5T7N3 995 aaPredicted RBP17.42■□□□□ 0.38
ITGA5-201ENST00000293379 LAS1LQ9Y4W2 734 aaKnown RBP17.42■□□□□ 0.38
ITGA5-201ENST00000293379 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
ITGA5-201ENST00000293379 CHGAP10645 457 aaKnown RBP17.39■□□□□ 0.38
ITGA5-201ENST00000293379 CCNB3Q8WWL7 1395 aa17.39■□□□□ 0.37
ITGA5-201ENST00000293379 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
ITGA5-201ENST00000293379 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
ITGA5-201ENST00000293379 NEFMP07197 916 aa17.39■□□□□ 0.37
ITGA5-201ENST00000293379 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.39■□□□□ 0.37
ITGA5-201ENST00000293379 NOP58Q9Y2X3 529 aaKnown RBP17.37■□□□□ 0.37
ITGA5-201ENST00000293379 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
ITGA5-201ENST00000293379 RGL3Q3MIN7 710 aa17.35■□□□□ 0.37
ITGA5-201ENST00000293379 TSPY4P0CV99 314 aa17.34■□□□□ 0.37
ITGA5-201ENST00000293379 TSPY10P0CW01 314 aa17.34■□□□□ 0.37
ITGA5-201ENST00000293379 ABCC8Q09428 1581 aa17.33■□□□□ 0.36
ITGA5-201ENST00000293379 DEKP35659 375 aaKnown RBP17.32■□□□□ 0.36
ITGA5-201ENST00000293379 ANP32BQ92688 251 aaKnown RBP17.31■□□□□ 0.36
ITGA5-201ENST00000293379 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
ITGA5-201ENST00000293379 CCER2I3L3R5 266 aa17.29■□□□□ 0.36
ITGA5-201ENST00000293379 KIF27Q86VH2 1401 aa17.27■□□□□ 0.36
ITGA5-201ENST00000293379 MROH2BQ7Z745 1585 aa17.26■□□□□ 0.35
ITGA5-201ENST00000293379 RGS3P49796 1198 aa17.25■□□□□ 0.35
ITGA5-201ENST00000293379 CARD11Q9BXL7 1154 aa17.25■□□□□ 0.35
ITGA5-201ENST00000293379 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
ITGA5-201ENST00000293379 NACADO15069 1562 aa17.23■□□□□ 0.35
ITGA5-201ENST00000293379 HSPA5P11021 654 aaKnown RBP17.22■□□□□ 0.35
ITGA5-201ENST00000293379 RAB3GAP2Q9H2M9 1393 aa17.21■□□□□ 0.35
ITGA5-201ENST00000293379 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
ITGA5-201ENST00000293379 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
ITGA5-201ENST00000293379 GLIPR1L2Q4G1C9 344 aa17.2■□□□□ 0.34
ITGA5-201ENST00000293379 FOXD1Q16676 465 aa17.19■□□□□ 0.34
ITGA5-201ENST00000293379 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
ITGA5-201ENST00000293379 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
ITGA5-201ENST00000293379 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
ITGA5-201ENST00000293379 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
ITGA5-201ENST00000293379 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
ITGA5-201ENST00000293379 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
ITGA5-201ENST00000293379 BECN1Q14457 450 aa17.15■□□□□ 0.34
ITGA5-201ENST00000293379 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
ITGA5-201ENST00000293379 CC2D1BQ5T0F9 858 aaKnown RBP17.14■□□□□ 0.33
ITGA5-201ENST00000293379 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
ITGA5-201ENST00000293379 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
ITGA5-201ENST00000293379 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
ITGA5-201ENST00000293379 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
ITGA5-201ENST00000293379 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
ITGA5-201ENST00000293379 CARMIL1Q5VZK9 1371 aa17.07■□□□□ 0.32
ITGA5-201ENST00000293379 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
ITGA5-201ENST00000293379 PLEKHD1A6NEE1 506 aa17.06■□□□□ 0.32
ITGA5-201ENST00000293379 ERICH6BQ5W0A0 696 aa17.06■□□□□ 0.32
ITGA5-201ENST00000293379 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
ITGA5-201ENST00000293379 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
ITGA5-201ENST00000293379 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
ITGA5-201ENST00000293379 CUX2O14529 1486 aa17.02■□□□□ 0.32
ITGA5-201ENST00000293379 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
ITGA5-201ENST00000293379 WIZO95785 1651 aa17■□□□□ 0.31
ITGA5-201ENST00000293379 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
ITGA5-201ENST00000293379 NAP1L5Q96NT1 182 aaPredicted RBP16.99■□□□□ 0.31
ITGA5-201ENST00000293379 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.99■□□□□ 0.31
ITGA5-201ENST00000293379 L3MBTL2Q969R5 705 aa16.99■□□□□ 0.31
ITGA5-201ENST00000293379 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
ITGA5-201ENST00000293379 RCAN3Q9UKA8 241 aa16.97■□□□□ 0.31
ITGA5-201ENST00000293379 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
ITGA5-201ENST00000293379 FTSJ3Q8IY81 847 aaKnown RBP16.96■□□□□ 0.31
ITGA5-201ENST00000293379 MPHOSPH9Q99550 1183 aa16.96■□□□□ 0.31
ITGA5-201ENST00000293379 IPO9Q96P70 1041 aaKnown RBP16.95■□□□□ 0.3
ITGA5-201ENST00000293379 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
ITGA5-201ENST00000293379 ARHGAP35Q9NRY4 1499 aa16.94■□□□□ 0.3
ITGA5-201ENST00000293379 PKD2Q13563 968 aa16.93■□□□□ 0.3
ITGA5-201ENST00000293379 NUDCQ9Y266 331 aa16.93■□□□□ 0.3
ITGA5-201ENST00000293379 TPRNQ4KMQ1 711 aa16.93■□□□□ 0.3
ITGA5-201ENST00000293379 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
ITGA5-201ENST00000293379 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
ITGA5-201ENST00000293379 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
ITGA5-201ENST00000293379 SLKQ9H2G2 1235 aaPredicted RBP16.9■□□□□ 0.3
ITGA5-201ENST00000293379 TCERG1O14776 1098 aaKnown RBP16.89■□□□□ 0.29
ITGA5-201ENST00000293379 CFAP53Q96M91 514 aa16.89■□□□□ 0.29
ITGA5-201ENST00000293379 TMF1P82094 1093 aa16.86■□□□□ 0.29
ITGA5-201ENST00000293379 ARID4BQ4LE39 1312 aaPredicted RBP16.86■□□□□ 0.29
ITGA5-201ENST00000293379 PRKRIP1Q9H875 184 aaPredicted RBP16.86■□□□□ 0.29
ITGA5-201ENST00000293379 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
ITGA5-201ENST00000293379 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
ITGA5-201ENST00000293379 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
ITGA5-201ENST00000293379 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.29
ITGA5-201ENST00000293379 U2SURPO15042 1029 aaKnown RBP16.83■□□□□ 0.28
ITGA5-201ENST00000293379 PTMAP06454 111 aaKnown RBP16.82■□□□□ 0.28
ITGA5-201ENST00000293379 FANCIQ9NVI1 1328 aa16.81■□□□□ 0.28
ITGA5-201ENST00000293379 HSP90AB1P08238 724 aaKnown RBP16.8■□□□□ 0.28
ITGA5-201ENST00000293379 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
ITGA5-201ENST00000293379 FHOD3Q2V2M9 1422 aa16.8■□□□□ 0.28
ITGA5-201ENST00000293379 PLIN1O60240 522 aa16.8■□□□□ 0.28
ITGA5-201ENST00000293379 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
ITGA5-201ENST00000293379 DNTTIP2Q5QJE6 756 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms