RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 LAS1LQ9Y4W2 734 aaKnown RBP20.41■□□□□ 0.86
SHROOM4-201ENST00000289292 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
SHROOM4-201ENST00000289292 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
SHROOM4-201ENST00000289292 GOLGA3Q08378 1498 aa20.38■□□□□ 0.85
SHROOM4-201ENST00000289292 SIN3AQ96ST3 1273 aa20.37■□□□□ 0.85
SHROOM4-201ENST00000289292 DDRGK1Q96HY6 314 aa20.32■□□□□ 0.84
SHROOM4-201ENST00000289292 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
SHROOM4-201ENST00000289292 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
SHROOM4-201ENST00000289292 B4GALNT3Q6L9W6 998 aa20.3■□□□□ 0.84
SHROOM4-201ENST00000289292 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
SHROOM4-201ENST00000289292 NOP58Q9Y2X3 529 aaKnown RBP20.27■□□□□ 0.84
SHROOM4-201ENST00000289292 PPP4R2Q9NY27 417 aa20.24■□□□□ 0.83
SHROOM4-201ENST00000289292 BECN1Q14457 450 aa20.22■□□□□ 0.83
SHROOM4-201ENST00000289292 RGL3Q3MIN7 710 aa20.21■□□□□ 0.83
SHROOM4-201ENST00000289292 TRIM44Q96DX7 344 aaPredicted RBP20.2■□□□□ 0.82
SHROOM4-201ENST00000289292 DEKP35659 375 aaKnown RBP20.19■□□□□ 0.82
SHROOM4-201ENST00000289292 TPRNQ4KMQ1 711 aa20.19■□□□□ 0.82
SHROOM4-201ENST00000289292 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
SHROOM4-201ENST00000289292 RBM19Q9Y4C8 960 aaKnown RBP20.19■□□□□ 0.82
SHROOM4-201ENST00000289292 TSPY4P0CV99 314 aa20.18■□□□□ 0.82
SHROOM4-201ENST00000289292 TSPY10P0CW01 314 aa20.18■□□□□ 0.82
SHROOM4-201ENST00000289292 NAP1L5Q96NT1 182 aaPredicted RBP20.17■□□□□ 0.82
SHROOM4-201ENST00000289292 NCLP19338 710 aaKnown RBP20.17■□□□□ 0.82
SHROOM4-201ENST00000289292 RGS3P49796 1198 aa20.16■□□□□ 0.82
SHROOM4-201ENST00000289292 MYH16Q9H6N6 1097 aa20.13■□□□□ 0.81
SHROOM4-201ENST00000289292 WRNQ14191 1432 aaPredicted RBP eCLIP20.11■□□□□ 0.81
SHROOM4-201ENST00000289292 EEA1Q15075 1411 aa20.11■□□□□ 0.81
SHROOM4-201ENST00000289292 PPM1GO15355 546 aaPredicted RBP20.1■□□□□ 0.81
SHROOM4-201ENST00000289292 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
SHROOM4-201ENST00000289292 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
SHROOM4-201ENST00000289292 CC2D1BQ5T0F9 858 aaKnown RBP20.08■□□□□ 0.81
SHROOM4-201ENST00000289292 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.8
SHROOM4-201ENST00000289292 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.8
SHROOM4-201ENST00000289292 PLEKHG5O94827 1062 aa20.05■□□□□ 0.8
SHROOM4-201ENST00000289292 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
SHROOM4-201ENST00000289292 ERICH6BQ5W0A0 696 aa20.03■□□□□ 0.8
SHROOM4-201ENST00000289292 SOGA1O94964 1423 aa20.02■□□□□ 0.8
SHROOM4-201ENST00000289292 FRAT1Q92837 279 aaPredicted RBP20.02■□□□□ 0.8
SHROOM4-201ENST00000289292 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.02■□□□□ 0.79
SHROOM4-201ENST00000289292 KNSTRNQ9Y448 316 aa20.01■□□□□ 0.79
SHROOM4-201ENST00000289292 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
SHROOM4-201ENST00000289292 FTSJ3Q8IY81 847 aaKnown RBP20■□□□□ 0.79
SHROOM4-201ENST00000289292 SPRYD3Q8NCJ5 442 aa20■□□□□ 0.79
SHROOM4-201ENST00000289292 ZBTB7CA1YPR0 619 aa19.99■□□□□ 0.79
SHROOM4-201ENST00000289292 GOLGA6L22H0YM25 854 aa19.99■□□□□ 0.79
SHROOM4-201ENST00000289292 PTMAP06454 111 aaKnown RBP19.99■□□□□ 0.79
SHROOM4-201ENST00000289292 TNNT2P45379 298 aaPredicted RBP19.98■□□□□ 0.79
SHROOM4-201ENST00000289292 KCNH8Q96L42 1107 aa19.98■□□□□ 0.79
SHROOM4-201ENST00000289292 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
SHROOM4-201ENST00000289292 DNTTIP2Q5QJE6 756 aaKnown RBP19.95■□□□□ 0.78
SHROOM4-201ENST00000289292 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
SHROOM4-201ENST00000289292 ARID4BQ4LE39 1312 aaPredicted RBP19.92■□□□□ 0.78
SHROOM4-201ENST00000289292 HSPA5P11021 654 aaKnown RBP19.92■□□□□ 0.78
SHROOM4-201ENST00000289292 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
SHROOM4-201ENST00000289292 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
SHROOM4-201ENST00000289292 CFDP1Q9UEE9 299 aaPredicted RBP19.89■□□□□ 0.78
SHROOM4-201ENST00000289292 CCER2I3L3R5 266 aa19.89■□□□□ 0.77
SHROOM4-201ENST00000289292 KANK4Q5T7N3 995 aaPredicted RBP19.89■□□□□ 0.77
SHROOM4-201ENST00000289292 FOXD1Q16676 465 aa19.88■□□□□ 0.77
SHROOM4-201ENST00000289292 NPM1P06748 294 aaKnown RBP eCLIP19.87■□□□□ 0.77
SHROOM4-201ENST00000289292 HSP90AB1P08238 724 aaKnown RBP19.87■□□□□ 0.77
SHROOM4-201ENST00000289292 CFAP53Q96M91 514 aa19.87■□□□□ 0.77
SHROOM4-201ENST00000289292 PLCB2Q00722 1185 aa19.86■□□□□ 0.77
SHROOM4-201ENST00000289292 C14orf37Q86TY3 774 aa19.85■□□□□ 0.77
SHROOM4-201ENST00000289292 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
SHROOM4-201ENST00000289292 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
SHROOM4-201ENST00000289292 PLEKHD1A6NEE1 506 aa19.83■□□□□ 0.76
SHROOM4-201ENST00000289292 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.76
SHROOM4-201ENST00000289292 CASC1Q6TDU7 716 aa19.82■□□□□ 0.76
SHROOM4-201ENST00000289292 DCAF11Q8TEB1 546 aa19.81■□□□□ 0.76
SHROOM4-201ENST00000289292 TAOK2Q9UL54 1235 aa19.8■□□□□ 0.76
SHROOM4-201ENST00000289292 AMER1Q5JTC6 1135 aaPredicted RBP19.79■□□□□ 0.76
SHROOM4-201ENST00000289292 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
SHROOM4-201ENST00000289292 CDCA8Q53HL2 280 aa19.77■□□□□ 0.76
SHROOM4-201ENST00000289292 A0A0G2JS52 829 aa19.77■□□□□ 0.75
SHROOM4-201ENST00000289292 RAB3GAP2Q9H2M9 1393 aa19.76■□□□□ 0.75
SHROOM4-201ENST00000289292 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
SHROOM4-201ENST00000289292 PPP1R15AO75807 674 aaPredicted RBP19.75■□□□□ 0.75
SHROOM4-201ENST00000289292 GZF1Q9H116 711 aaPredicted RBP19.74■□□□□ 0.75
SHROOM4-201ENST00000289292 VPS8Q8N3P4 1428 aa19.74■□□□□ 0.75
SHROOM4-201ENST00000289292 CCDC88BA6NC98 1476 aa19.74■□□□□ 0.75
SHROOM4-201ENST00000289292 HSCBQ8IWL3 235 aa19.73■□□□□ 0.75
SHROOM4-201ENST00000289292 ARID3AQ99856 593 aa19.73■□□□□ 0.75
SHROOM4-201ENST00000289292 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
SHROOM4-201ENST00000289292 SLKQ9H2G2 1235 aaPredicted RBP19.71■□□□□ 0.75
SHROOM4-201ENST00000289292 RCAN3Q9UKA8 241 aa19.69■□□□□ 0.74
SHROOM4-201ENST00000289292 TMF1P82094 1093 aa19.68■□□□□ 0.74
SHROOM4-201ENST00000289292 L1TD1Q5T7N2 865 aaKnown RBP19.68■□□□□ 0.74
SHROOM4-201ENST00000289292 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
SHROOM4-201ENST00000289292 ZRSR1Q15695 479 aaKnown RBP19.67■□□□□ 0.74
SHROOM4-201ENST00000289292 IPO9Q96P70 1041 aaKnown RBP19.65■□□□□ 0.74
SHROOM4-201ENST00000289292 NUDCQ9Y266 331 aa19.65■□□□□ 0.74
SHROOM4-201ENST00000289292 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
SHROOM4-201ENST00000289292 MSNP26038 577 aaKnown RBP19.64■□□□□ 0.73
SHROOM4-201ENST00000289292 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
SHROOM4-201ENST00000289292 CDK11BP21127 795 aaKnown RBP19.63■□□□□ 0.73
SHROOM4-201ENST00000289292 CUX2O14529 1486 aa19.63■□□□□ 0.73
SHROOM4-201ENST00000289292 TIMELESSQ9UNS1 1208 aa19.62■□□□□ 0.73
SHROOM4-201ENST00000289292 CARMIL1Q5VZK9 1371 aa19.61■□□□□ 0.73
SHROOM4-201ENST00000289292 KTN1Q86UP2 1357 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms