RNA–Protein interactions for RNA: ENST00000286628.13

KCNMA1-202, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-202ENST00000286628 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
KCNMA1-202ENST00000286628 ANP32BQ92688 251 aaKnown RBP19.71■□□□□ 0.75
KCNMA1-202ENST00000286628 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
KCNMA1-202ENST00000286628 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
KCNMA1-202ENST00000286628 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
KCNMA1-202ENST00000286628 PPP1R15AO75807 674 aaPredicted RBP19.67■□□□□ 0.74
KCNMA1-202ENST00000286628 CFDP1Q9UEE9 299 aaPredicted RBP19.67■□□□□ 0.74
KCNMA1-202ENST00000286628 NACADO15069 1562 aa19.66■□□□□ 0.74
KCNMA1-202ENST00000286628 MIER1Q8N108 512 aa19.65■□□□□ 0.74
KCNMA1-202ENST00000286628 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
KCNMA1-202ENST00000286628 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
KCNMA1-202ENST00000286628 TNIKQ9UKE5 1360 aa19.59■□□□□ 0.73
KCNMA1-202ENST00000286628 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.73
KCNMA1-202ENST00000286628 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
KCNMA1-202ENST00000286628 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
KCNMA1-202ENST00000286628 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
KCNMA1-202ENST00000286628 C14orf37Q86TY3 774 aa19.55■□□□□ 0.72
KCNMA1-202ENST00000286628 IRX6P78412 446 aaPredicted RBP19.52■□□□□ 0.72
KCNMA1-202ENST00000286628 CFAP53Q96M91 514 aa19.51■□□□□ 0.71
KCNMA1-202ENST00000286628 A0A0G2JS52 829 aa19.5■□□□□ 0.71
KCNMA1-202ENST00000286628 ZBTB7CA1YPR0 619 aa19.5■□□□□ 0.71
KCNMA1-202ENST00000286628 ARID4BQ4LE39 1312 aaPredicted RBP19.5■□□□□ 0.71
KCNMA1-202ENST00000286628 KNSTRNQ9Y448 316 aa19.5■□□□□ 0.71
KCNMA1-202ENST00000286628 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
KCNMA1-202ENST00000286628 CARD11Q9BXL7 1154 aa19.49■□□□□ 0.71
KCNMA1-202ENST00000286628 PLEKHG5O94827 1062 aa19.48■□□□□ 0.71
KCNMA1-202ENST00000286628 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
KCNMA1-202ENST00000286628 ERCC6Q03468 1493 aa19.44■□□□□ 0.7
KCNMA1-202ENST00000286628 PPM1GO15355 546 aaPredicted RBP19.39■□□□□ 0.69
KCNMA1-202ENST00000286628 NBR1Q14596 966 aa19.39■□□□□ 0.69
KCNMA1-202ENST00000286628 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
KCNMA1-202ENST00000286628 CCNB3Q8WWL7 1395 aa19.37■□□□□ 0.69
KCNMA1-202ENST00000286628 SIN3AQ96ST3 1273 aa19.37■□□□□ 0.69
KCNMA1-202ENST00000286628 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
KCNMA1-202ENST00000286628 CARMIL1Q5VZK9 1371 aa19.36■□□□□ 0.69
KCNMA1-202ENST00000286628 POGKQ9P215 609 aa19.36■□□□□ 0.69
KCNMA1-202ENST00000286628 EIF5BO60841 1220 aaKnown RBP19.35■□□□□ 0.69
KCNMA1-202ENST00000286628 NUDCQ9Y266 331 aa19.33■□□□□ 0.69
KCNMA1-202ENST00000286628 CECR2Q9BXF3 1484 aa19.33■□□□□ 0.68
KCNMA1-202ENST00000286628 BECN1Q14457 450 aa19.32■□□□□ 0.68
KCNMA1-202ENST00000286628 SENP3-EIF4A1A0A087X0R7 540 aa19.31■□□□□ 0.68
KCNMA1-202ENST00000286628 MAPK8IP3Q9UPT6 1336 aa19.31■□□□□ 0.68
KCNMA1-202ENST00000286628 ARXQ96QS3 562 aa19.31■□□□□ 0.68
KCNMA1-202ENST00000286628 CUX2O14529 1486 aa19.31■□□□□ 0.68
KCNMA1-202ENST00000286628 NEUROD2Q15784 382 aa19.3■□□□□ 0.68
KCNMA1-202ENST00000286628 DDRGK1Q96HY6 314 aa19.29■□□□□ 0.68
KCNMA1-202ENST00000286628 FTSJ3Q8IY81 847 aaKnown RBP19.28■□□□□ 0.68
KCNMA1-202ENST00000286628 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.68
KCNMA1-202ENST00000286628 LMOD2Q6P5Q4 547 aa19.24■□□□□ 0.67
KCNMA1-202ENST00000286628 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
KCNMA1-202ENST00000286628 TIMELESSQ9UNS1 1208 aa19.24■□□□□ 0.67
KCNMA1-202ENST00000286628 LAS1LQ9Y4W2 734 aaKnown RBP19.23■□□□□ 0.67
KCNMA1-202ENST00000286628 SOGA1O94964 1423 aa19.22■□□□□ 0.67
KCNMA1-202ENST00000286628 KANK1Q14678 1352 aa19.22■□□□□ 0.67
KCNMA1-202ENST00000286628 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
KCNMA1-202ENST00000286628 TMF1P82094 1093 aa19.22■□□□□ 0.67
KCNMA1-202ENST00000286628 NCLP19338 710 aaKnown RBP19.22■□□□□ 0.67
KCNMA1-202ENST00000286628 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
KCNMA1-202ENST00000286628 GOLGA6L22H0YM25 854 aa19.2■□□□□ 0.66
KCNMA1-202ENST00000286628 CC2D1BQ5T0F9 858 aaKnown RBP19.2■□□□□ 0.66
KCNMA1-202ENST00000286628 ANP32EQ9BTT0 268 aa19.19■□□□□ 0.66
KCNMA1-202ENST00000286628 HDGFP51858 240 aaKnown RBP19.18■□□□□ 0.66
KCNMA1-202ENST00000286628 CASC1Q6TDU7 716 aa19.18■□□□□ 0.66
KCNMA1-202ENST00000286628 U2SURPO15042 1029 aaKnown RBP19.17■□□□□ 0.66
KCNMA1-202ENST00000286628 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
KCNMA1-202ENST00000286628 CHMP4BQ9H444 224 aaKnown RBP19.16■□□□□ 0.66
KCNMA1-202ENST00000286628 FRAT1Q92837 279 aaPredicted RBP19.15■□□□□ 0.66
KCNMA1-202ENST00000286628 MS4A1P11836 297 aa19.14■□□□□ 0.65
KCNMA1-202ENST00000286628 PPP4R2Q9NY27 417 aa19.13■□□□□ 0.65
KCNMA1-202ENST00000286628 MLECQ14165 292 aa19.13■□□□□ 0.65
KCNMA1-202ENST00000286628 CDK11BP21127 795 aaKnown RBP19.12■□□□□ 0.65
KCNMA1-202ENST00000286628 VPS8Q8N3P4 1428 aa19.11■□□□□ 0.65
KCNMA1-202ENST00000286628 CARMIL2Q6F5E8 1435 aa19.11■□□□□ 0.65
KCNMA1-202ENST00000286628 SETD5Q9C0A6 1442 aa19.1■□□□□ 0.65
KCNMA1-202ENST00000286628 SRPK2P78362 688 aaKnown RBP19.1■□□□□ 0.65
KCNMA1-202ENST00000286628 GGT6Q6P531 493 aa19.09■□□□□ 0.65
KCNMA1-202ENST00000286628 RGS3P49796 1198 aa19.09■□□□□ 0.65
KCNMA1-202ENST00000286628 PKD2Q13563 968 aa19.09■□□□□ 0.65
KCNMA1-202ENST00000286628 ARHGAP35Q9NRY4 1499 aa19.08■□□□□ 0.65
KCNMA1-202ENST00000286628 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.65
KCNMA1-202ENST00000286628 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.65
KCNMA1-202ENST00000286628 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.65
KCNMA1-202ENST00000286628 TRIM44Q96DX7 344 aaPredicted RBP19.06■□□□□ 0.64
KCNMA1-202ENST00000286628 MORC1Q86VD1 984 aa19.05■□□□□ 0.64
KCNMA1-202ENST00000286628 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
KCNMA1-202ENST00000286628 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
KCNMA1-202ENST00000286628 ZRSR1Q15695 479 aaKnown RBP19.04■□□□□ 0.64
KCNMA1-202ENST00000286628 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
KCNMA1-202ENST00000286628 GLIPR1L2Q4G1C9 344 aa19.04■□□□□ 0.64
KCNMA1-202ENST00000286628 EFCAB2Q5VUJ9 269 aa19.03■□□□□ 0.64
KCNMA1-202ENST00000286628 SAFB2Q14151 953 aaKnown RBP eCLIP19.03■□□□□ 0.64
KCNMA1-202ENST00000286628 SMARCA2P51531 1590 aa19.02■□□□□ 0.64
KCNMA1-202ENST00000286628 HSPA5P11021 654 aaKnown RBP19.02■□□□□ 0.64
KCNMA1-202ENST00000286628 OS9Q13438 667 aaPredicted RBP19.02■□□□□ 0.63
KCNMA1-202ENST00000286628 FMN1Q68DA7 1419 aa19.01■□□□□ 0.63
KCNMA1-202ENST00000286628 CCER2I3L3R5 266 aa19.01■□□□□ 0.63
KCNMA1-202ENST00000286628 SOX12O15370 315 aa19■□□□□ 0.63
KCNMA1-202ENST00000286628 NPHP1O15259 732 aa18.99■□□□□ 0.63
KCNMA1-202ENST00000286628 FOXD1Q16676 465 aa18.98■□□□□ 0.63
KCNMA1-202ENST00000286628 STK26Q9P289 416 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms