RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 SALL2Q9Y467 1007 aaPredicted RBP15.29■□□□□ 0.04
USP6NL-201ENST00000277575 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
USP6NL-201ENST00000277575 EIF4G2P78344 907 aaKnown RBP eCLIP15.26■□□□□ 0.03
USP6NL-201ENST00000277575 FKBP8Q14318 412 aa15.25■□□□□ 0.03
USP6NL-201ENST00000277575 MRS2Q9HD23 443 aa15.24■□□□□ 0.03
USP6NL-201ENST00000277575 RGL3Q3MIN7 710 aa15.23■□□□□ 0.03
USP6NL-201ENST00000277575 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.03
USP6NL-201ENST00000277575 MROH2BQ7Z745 1585 aa15.21■□□□□ 0.02
USP6NL-201ENST00000277575 CUX2O14529 1486 aa15.2■□□□□ 0.02
USP6NL-201ENST00000277575 SOGA1O94964 1423 aa15.2■□□□□ 0.02
USP6NL-201ENST00000277575 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
USP6NL-201ENST00000277575 MIER1Q8N108 512 aa15.18■□□□□ 0.02
USP6NL-201ENST00000277575 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
USP6NL-201ENST00000277575 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
USP6NL-201ENST00000277575 PPP1R15AO75807 674 aaPredicted RBP15.15■□□□□ 0.02
USP6NL-201ENST00000277575 CCDC88BA6NC98 1476 aa15.15■□□□□ 0.02
USP6NL-201ENST00000277575 FHAD1B1AJZ9 1412 aa15.13■□□□□ 0.01
USP6NL-201ENST00000277575 NPM2Q86SE8 214 aaKnown RBP15.13■□□□□ 0.01
USP6NL-201ENST00000277575 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.09■□□□□ 0.01
USP6NL-201ENST00000277575 ARID4BQ4LE39 1312 aaPredicted RBP15.09■□□□□ 0.01
USP6NL-201ENST00000277575 CCNB3Q8WWL7 1395 aa15.08■□□□□ 0.01
USP6NL-201ENST00000277575 CCDC136Q96JN2 1154 aa15.08■□□□□ 0.01
USP6NL-201ENST00000277575 SIN3AQ96ST3 1273 aa15.08■□□□□ 0.01
USP6NL-201ENST00000277575 SMARCA2P51531 1590 aa15.08■□□□□ 0
USP6NL-201ENST00000277575 CARD11Q9BXL7 1154 aa15.06■□□□□ 0
USP6NL-201ENST00000277575 PDS5BQ9NTI5 1447 aa15.06■□□□□ 0
USP6NL-201ENST00000277575 EIF4G1Q04637 1599 aaKnown RBP15.05■□□□□ -0
USP6NL-201ENST00000277575 TDRD9Q8NDG6 1382 aaKnown RBP15.04■□□□□ -0
USP6NL-201ENST00000277575 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
USP6NL-201ENST00000277575 ABCC8Q09428 1581 aa15.04■□□□□ -0
USP6NL-201ENST00000277575 CDCA8Q53HL2 280 aa15.04■□□□□ -0
USP6NL-201ENST00000277575 UPF2Q9HAU5 1272 aaKnown RBP15.02■□□□□ -0
USP6NL-201ENST00000277575 C14orf37Q86TY3 774 aa15.01□□□□□ -0.01
USP6NL-201ENST00000277575 PLEKHG5O94827 1062 aa15□□□□□ -0.01
USP6NL-201ENST00000277575 KNSTRNQ9Y448 316 aa15□□□□□ -0.01
USP6NL-201ENST00000277575 VPS8Q8N3P4 1428 aa15□□□□□ -0.01
USP6NL-201ENST00000277575 HSP90AA1P07900 732 aaKnown RBP14.99□□□□□ -0.01
USP6NL-201ENST00000277575 IRX6P78412 446 aaPredicted RBP14.98□□□□□ -0.01
USP6NL-201ENST00000277575 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
USP6NL-201ENST00000277575 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
USP6NL-201ENST00000277575 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.01
USP6NL-201ENST00000277575 ZBTB7CA1YPR0 619 aa14.96□□□□□ -0.02
USP6NL-201ENST00000277575 CFAP53Q96M91 514 aa14.95□□□□□ -0.02
USP6NL-201ENST00000277575 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
USP6NL-201ENST00000277575 CARMIL2Q6F5E8 1435 aa14.93□□□□□ -0.02
USP6NL-201ENST00000277575 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
USP6NL-201ENST00000277575 POGKQ9P215 609 aa14.92□□□□□ -0.02
USP6NL-201ENST00000277575 WIZO95785 1651 aa14.92□□□□□ -0.02
USP6NL-201ENST00000277575 DCAF11Q8TEB1 546 aa14.92□□□□□ -0.02
USP6NL-201ENST00000277575 PPM1GO15355 546 aaPredicted RBP14.92□□□□□ -0.02
USP6NL-201ENST00000277575 A0A0G2JS52 829 aa14.91□□□□□ -0.02
USP6NL-201ENST00000277575 TIMELESSQ9UNS1 1208 aa14.9□□□□□ -0.02
USP6NL-201ENST00000277575 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
USP6NL-201ENST00000277575 ARHGAP35Q9NRY4 1499 aa14.88□□□□□ -0.03
USP6NL-201ENST00000277575 FMN1Q68DA7 1419 aa14.88□□□□□ -0.03
USP6NL-201ENST00000277575 SETD5Q9C0A6 1442 aa14.87□□□□□ -0.03
USP6NL-201ENST00000277575 MYH16Q9H6N6 1097 aa14.87□□□□□ -0.03
USP6NL-201ENST00000277575 KANK1Q14678 1352 aa14.87□□□□□ -0.03
USP6NL-201ENST00000277575 MLECQ14165 292 aa14.87□□□□□ -0.03
USP6NL-201ENST00000277575 GGT6Q6P531 493 aa14.86□□□□□ -0.03
USP6NL-201ENST00000277575 PKD2Q13563 968 aa14.85□□□□□ -0.03
USP6NL-201ENST00000277575 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
USP6NL-201ENST00000277575 NEUROD2Q15784 382 aa14.85□□□□□ -0.03
USP6NL-201ENST00000277575 EFCAB2Q5VUJ9 269 aa14.84□□□□□ -0.03
USP6NL-201ENST00000277575 HAP1P54257 671 aaPredicted RBP14.83□□□□□ -0.04
USP6NL-201ENST00000277575 TNNT2P45379 298 aaPredicted RBP14.82□□□□□ -0.04
USP6NL-201ENST00000277575 TMF1P82094 1093 aa14.82□□□□□ -0.04
USP6NL-201ENST00000277575 NUDCQ9Y266 331 aa14.82□□□□□ -0.04
USP6NL-201ENST00000277575 FOXD1Q16676 465 aa14.82□□□□□ -0.04
USP6NL-201ENST00000277575 CC2D1BQ5T0F9 858 aaKnown RBP14.81□□□□□ -0.04
USP6NL-201ENST00000277575 LMOD2Q6P5Q4 547 aa14.81□□□□□ -0.04
USP6NL-201ENST00000277575 RAPGEF2Q9Y4G8 1499 aa14.81□□□□□ -0.04
USP6NL-201ENST00000277575 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
USP6NL-201ENST00000277575 MAPK8IP3Q9UPT6 1336 aa14.8□□□□□ -0.04
USP6NL-201ENST00000277575 JPH4Q96JJ6 628 aa14.79□□□□□ -0.04
USP6NL-201ENST00000277575 FHOD3Q2V2M9 1422 aa14.78□□□□□ -0.04
USP6NL-201ENST00000277575 HDGFP51858 240 aaKnown RBP14.78□□□□□ -0.04
USP6NL-201ENST00000277575 ANP32BQ92688 251 aaKnown RBP14.77□□□□□ -0.04
USP6NL-201ENST00000277575 MPHOSPH9Q99550 1183 aa14.77□□□□□ -0.04
USP6NL-201ENST00000277575 RAB3GAP2Q9H2M9 1393 aa14.77□□□□□ -0.05
USP6NL-201ENST00000277575 NUP155O75694 1391 aa14.77□□□□□ -0.05
USP6NL-201ENST00000277575 SMARCA4P51532 1647 aa14.77□□□□□ -0.05
USP6NL-201ENST00000277575 HSPA5P11021 654 aaKnown RBP14.75□□□□□ -0.05
USP6NL-201ENST00000277575 U2SURPO15042 1029 aaKnown RBP14.75□□□□□ -0.05
USP6NL-201ENST00000277575 SAFB2Q14151 953 aaKnown RBP eCLIP14.75□□□□□ -0.05
USP6NL-201ENST00000277575 ANKRD30AQ9BXX3 1397 aa14.75□□□□□ -0.05
USP6NL-201ENST00000277575 SRPK2P78362 688 aaKnown RBP14.74□□□□□ -0.05
USP6NL-201ENST00000277575 LAS1LQ9Y4W2 734 aaKnown RBP14.74□□□□□ -0.05
USP6NL-201ENST00000277575 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
USP6NL-201ENST00000277575 HNRNPMP52272 730 aaKnown RBP eCLIP14.72□□□□□ -0.05
USP6NL-201ENST00000277575 FANCD2Q9BXW9 1451 aa14.72□□□□□ -0.05
USP6NL-201ENST00000277575 KIF3BO15066 747 aa14.71□□□□□ -0.05
USP6NL-201ENST00000277575 STK26Q9P289 416 aa14.7□□□□□ -0.06
USP6NL-201ENST00000277575 ARXQ96QS3 562 aa14.69□□□□□ -0.06
USP6NL-201ENST00000277575 NBR1Q14596 966 aa14.69□□□□□ -0.06
USP6NL-201ENST00000277575 RUSC2Q8N2Y8 1516 aa14.69□□□□□ -0.06
USP6NL-201ENST00000277575 BICRAQ9NZM4 1560 aa14.69□□□□□ -0.06
USP6NL-201ENST00000277575 RSPH4AQ5TD94 716 aa14.69□□□□□ -0.06
USP6NL-201ENST00000277575 FRAT1Q92837 279 aaPredicted RBP14.69□□□□□ -0.06
USP6NL-201ENST00000277575 MORC1Q86VD1 984 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms