RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PHF12Q96QT6 1004 aa20.19■□□□□ 0.82
LRTM1-201ENST00000273286 TSPYL2Q9H2G4 693 aaPredicted RBP20.17■□□□□ 0.82
LRTM1-201ENST00000273286 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
LRTM1-201ENST00000273286 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
LRTM1-201ENST00000273286 RASEFQ8IZ41 740 aa20.09■□□□□ 0.81
LRTM1-201ENST00000273286 VASPP50552 380 aaPredicted RBP20.07■□□□□ 0.8
LRTM1-201ENST00000273286 GALR2O43603 387 aaPredicted RBP20.06■□□□□ 0.8
LRTM1-201ENST00000273286 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.79
LRTM1-201ENST00000273286 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
LRTM1-201ENST00000273286 POTEIP0CG38 1075 aa19.99■□□□□ 0.79
LRTM1-201ENST00000273286 NUBP1P53384 320 aa19.99■□□□□ 0.79
LRTM1-201ENST00000273286 DCBLD2Q96PD2 775 aa19.99■□□□□ 0.79
LRTM1-201ENST00000273286 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
LRTM1-201ENST00000273286 BICRAQ9NZM4 1560 aa19.98■□□□□ 0.79
LRTM1-201ENST00000273286 MS4A3Q96HJ5 214 aa19.93■□□□□ 0.78
LRTM1-201ENST00000273286 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
LRTM1-201ENST00000273286 KLHL34Q8N239 644 aa19.9■□□□□ 0.78
LRTM1-201ENST00000273286 FAM212AQ96EL1 285 aa19.88■□□□□ 0.77
LRTM1-201ENST00000273286 KIF12Q96FN5 646 aa19.86■□□□□ 0.77
LRTM1-201ENST00000273286 MAP3K13O43283 966 aa19.78■□□□□ 0.76
LRTM1-201ENST00000273286 DCAF8Q5TAQ9 597 aa19.75■□□□□ 0.75
LRTM1-201ENST00000273286 IFNLR1Q8IU57 520 aaPredicted RBP19.72■□□□□ 0.75
LRTM1-201ENST00000273286 PCDHB13Q9Y5F0 798 aa19.67■□□□□ 0.74
LRTM1-201ENST00000273286 SCRIBQ14160 1630 aa19.66■□□□□ 0.74
LRTM1-201ENST00000273286 LHX8Q68G74 356 aa19.65■□□□□ 0.74
LRTM1-201ENST00000273286 ASTLQ6HA08 431 aaPredicted RBP19.65■□□□□ 0.74
LRTM1-201ENST00000273286 TRPC6Q9Y210 931 aa19.65■□□□□ 0.74
LRTM1-201ENST00000273286 ATMINO43313 823 aaPredicted RBP19.63■□□□□ 0.73
LRTM1-201ENST00000273286 SGIP1Q9BQI5 828 aa19.62■□□□□ 0.73
LRTM1-201ENST00000273286 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
LRTM1-201ENST00000273286 SPOCK2Q92563 424 aa19.61■□□□□ 0.73
LRTM1-201ENST00000273286 PYGBP11216 843 aa19.6■□□□□ 0.73
LRTM1-201ENST00000273286 GSE1Q14687 1217 aa19.59■□□□□ 0.73
LRTM1-201ENST00000273286 BMP2KQ9NSY1 1161 aaPredicted RBP19.57■□□□□ 0.72
LRTM1-201ENST00000273286 IFNL1Q8IU54 200 aa19.56■□□□□ 0.72
LRTM1-201ENST00000273286 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
LRTM1-201ENST00000273286 TIE1P35590 1138 aa19.55■□□□□ 0.72
LRTM1-201ENST00000273286 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
LRTM1-201ENST00000273286 ATN1P54259 1190 aaPredicted RBP19.53■□□□□ 0.72
LRTM1-201ENST00000273286 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
LRTM1-201ENST00000273286 SLC39A7Q92504 469 aa19.47■□□□□ 0.71
LRTM1-201ENST00000273286 METRNQ9UJH8 293 aa19.47■□□□□ 0.71
LRTM1-201ENST00000273286 TTLL13PA6NNM8 815 aa19.46■□□□□ 0.71
LRTM1-201ENST00000273286 CIZ1Q9ULV3 898 aaPredicted RBP19.45■□□□□ 0.7
LRTM1-201ENST00000273286 C7P10643 843 aa19.42■□□□□ 0.7
LRTM1-201ENST00000273286 PCDHB8Q9UN66 801 aa19.41■□□□□ 0.7
LRTM1-201ENST00000273286 TMEM106CQ9BVX2 250 aa19.37■□□□□ 0.69
LRTM1-201ENST00000273286 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
LRTM1-201ENST00000273286 CHRM1P11229 460 aaPredicted RBP19.34■□□□□ 0.69
LRTM1-201ENST00000273286 POTEB2H3BUK9 544 aa19.34■□□□□ 0.69
LRTM1-201ENST00000273286 ZNF467Q7Z7K2 595 aaPredicted RBP19.32■□□□□ 0.68
LRTM1-201ENST00000273286 POTEFA5A3E0 1075 aa19.21■□□□□ 0.67
LRTM1-201ENST00000273286 IER5LQ5T953 404 aa19.21■□□□□ 0.67
LRTM1-201ENST00000273286 SEC24BO95487 1268 aa19.2■□□□□ 0.66
LRTM1-201ENST00000273286 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
LRTM1-201ENST00000273286 COLQQ9Y215 455 aaPredicted RBP19.17■□□□□ 0.66
LRTM1-201ENST00000273286 OTUD5Q96G74 571 aa19.17■□□□□ 0.66
LRTM1-201ENST00000273286 POTEJP0CG39 1038 aa19.13■□□□□ 0.65
LRTM1-201ENST00000273286 PSEN1P49768 467 aa19.13■□□□□ 0.65
LRTM1-201ENST00000273286 PDAP1Q13442 181 aaKnown RBP19.09■□□□□ 0.65
LRTM1-201ENST00000273286 PLCG2P16885 1265 aa19.06■□□□□ 0.64
LRTM1-201ENST00000273286 MAMSTRQ6ZN01 415 aa19.05■□□□□ 0.64
LRTM1-201ENST00000273286 IRX5P78411 483 aaPredicted RBP19.04■□□□□ 0.64
LRTM1-201ENST00000273286 GOLGA2Q08379 1002 aa19.04■□□□□ 0.64
LRTM1-201ENST00000273286 SCUBE2Q9NQ36 999 aa19.01■□□□□ 0.63
LRTM1-201ENST00000273286 MKRN3Q13064 507 aaKnown RBP18.98■□□□□ 0.63
LRTM1-201ENST00000273286 OCEL1Q9H607 264 aa18.97■□□□□ 0.63
LRTM1-201ENST00000273286 RNF25Q96BH1 459 aaPredicted RBP18.94■□□□□ 0.62
LRTM1-201ENST00000273286 NCAPD3P42695 1498 aa18.94■□□□□ 0.62
LRTM1-201ENST00000273286 RIOK3O14730 519 aaKnown RBP18.92■□□□□ 0.62
LRTM1-201ENST00000273286 CABP2Q9NPB3 220 aa18.92■□□□□ 0.62
LRTM1-201ENST00000273286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.61
LRTM1-201ENST00000273286 PDCD7Q8N8D1 485 aaKnown RBP18.84■□□□□ 0.61
LRTM1-201ENST00000273286 SMARCA2P51531 1590 aa18.84■□□□□ 0.61
LRTM1-201ENST00000273286 ECM2O94769 699 aaPredicted RBP18.83■□□□□ 0.61
LRTM1-201ENST00000273286 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.61
LRTM1-201ENST00000273286 VGFO15240 615 aaPredicted RBP18.82■□□□□ 0.6
LRTM1-201ENST00000273286 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
LRTM1-201ENST00000273286 SMARCA4P51532 1647 aa18.81■□□□□ 0.6
LRTM1-201ENST00000273286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.79■□□□□ 0.6
LRTM1-201ENST00000273286 PKD2Q13563 968 aa18.79■□□□□ 0.6
LRTM1-201ENST00000273286 ZFP91Q96JP5 570 aaPredicted RBP18.79■□□□□ 0.6
LRTM1-201ENST00000273286 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.59
LRTM1-201ENST00000273286 CUX2O14529 1486 aa18.76■□□□□ 0.59
LRTM1-201ENST00000273286 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
LRTM1-201ENST00000273286 EFCAB3Q8N7B9 438 aa18.73■□□□□ 0.59
LRTM1-201ENST00000273286 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
LRTM1-201ENST00000273286 ILDR1Q86SU0 546 aaPredicted RBP18.72■□□□□ 0.59
LRTM1-201ENST00000273286 SLAIN1Q8ND83 568 aa18.7■□□□□ 0.58
LRTM1-201ENST00000273286 TAOK2Q9UL54 1235 aa18.7■□□□□ 0.58
LRTM1-201ENST00000273286 L3MBTL3Q96JM7 780 aaPredicted RBP18.68■□□□□ 0.58
LRTM1-201ENST00000273286 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
LRTM1-201ENST00000273286 BAZ1BQ9UIG0 1483 aaKnown RBP18.67■□□□□ 0.58
LRTM1-201ENST00000273286 RGL2O15211 777 aa18.66■□□□□ 0.58
LRTM1-201ENST00000273286 DPY19L2Q6NUT2 758 aa18.65■□□□□ 0.58
LRTM1-201ENST00000273286 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.65■□□□□ 0.58
LRTM1-201ENST00000273286 C3orf67Q6ZVT6 689 aa18.63■□□□□ 0.57
LRTM1-201ENST00000273286 BCL11BQ9C0K0 894 aaPredicted RBP18.62■□□□□ 0.57
LRTM1-201ENST00000273286 STK24Q9Y6E0 443 aa18.59■□□□□ 0.57
LRTM1-201ENST00000273286 FAM163AQ96GL9 167 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms