RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 NACADO15069 1562 aa22.51■■□□□ 1.19
SCAP-201ENST00000265565 CCNB3Q8WWL7 1395 aa22.48■■□□□ 1.19
SCAP-201ENST00000265565 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
SCAP-201ENST00000265565 CANXP27824 592 aaKnown RBP22.45■■□□□ 1.18
SCAP-201ENST00000265565 KDM2AQ9Y2K7 1162 aa22.45■■□□□ 1.18
SCAP-201ENST00000265565 TSHZ2Q9NRE2 1034 aa22.44■■□□□ 1.18
SCAP-201ENST00000265565 RBM19Q9Y4C8 960 aaKnown RBP22.41■■□□□ 1.18
SCAP-201ENST00000265565 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
SCAP-201ENST00000265565 BCL11AQ9H165 835 aa22.39■■□□□ 1.17
SCAP-201ENST00000265565 KCNH8Q96L42 1107 aa22.39■■□□□ 1.17
SCAP-201ENST00000265565 EIF5BO60841 1220 aaKnown RBP22.36■■□□□ 1.17
SCAP-201ENST00000265565 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
SCAP-201ENST00000265565 WIZO95785 1651 aa22.35■■□□□ 1.17
SCAP-201ENST00000265565 B4GALNT3Q6L9W6 998 aa22.35■■□□□ 1.17
SCAP-201ENST00000265565 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.16
SCAP-201ENST00000265565 PPP4R2Q9NY27 417 aa22.3■■□□□ 1.16
SCAP-201ENST00000265565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.26■■□□□ 1.15
SCAP-201ENST00000265565 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
SCAP-201ENST00000265565 CCER2I3L3R5 266 aa22.25■■□□□ 1.15
SCAP-201ENST00000265565 SETD5Q9C0A6 1442 aa22.22■■□□□ 1.15
SCAP-201ENST00000265565 DHX57Q6P158 1386 aaKnown RBP22.2■■□□□ 1.14
SCAP-201ENST00000265565 TIMELESSQ9UNS1 1208 aa22.2■■□□□ 1.14
SCAP-201ENST00000265565 TSPY4P0CV99 314 aa22.18■■□□□ 1.14
SCAP-201ENST00000265565 TSPY10P0CW01 314 aa22.18■■□□□ 1.14
SCAP-201ENST00000265565 PPP1R15AO75807 674 aaPredicted RBP22.15■■□□□ 1.14
SCAP-201ENST00000265565 RAPGEF2Q9Y4G8 1499 aa22.14■■□□□ 1.13
SCAP-201ENST00000265565 ARXQ96QS3 562 aa22.14■■□□□ 1.13
SCAP-201ENST00000265565 CARMIL1Q5VZK9 1371 aa22.13■■□□□ 1.13
SCAP-201ENST00000265565 HSPA5P11021 654 aaKnown RBP22.13■■□□□ 1.13
SCAP-201ENST00000265565 RGL3Q3MIN7 710 aa22.13■■□□□ 1.13
SCAP-201ENST00000265565 WDR43Q15061 677 aaKnown RBP eCLIP22.11■■□□□ 1.13
SCAP-201ENST00000265565 NOP58Q9Y2X3 529 aaKnown RBP22.11■■□□□ 1.13
SCAP-201ENST00000265565 LAS1LQ9Y4W2 734 aaKnown RBP22.09■■□□□ 1.13
SCAP-201ENST00000265565 CUX2O14529 1486 aa22.09■■□□□ 1.13
SCAP-201ENST00000265565 FOXD1Q16676 465 aa22.08■■□□□ 1.13
SCAP-201ENST00000265565 CHGAP10645 457 aaKnown RBP22.06■■□□□ 1.12
SCAP-201ENST00000265565 CARD11Q9BXL7 1154 aa22.06■■□□□ 1.12
SCAP-201ENST00000265565 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.06■■□□□ 1.12
SCAP-201ENST00000265565 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
SCAP-201ENST00000265565 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
SCAP-201ENST00000265565 RTN4Q9NQC3 1192 aaKnown RBP22.04■■□□□ 1.12
SCAP-201ENST00000265565 UPF2Q9HAU5 1272 aaKnown RBP22.04■■□□□ 1.12
SCAP-201ENST00000265565 DEKP35659 375 aaKnown RBP22.02■■□□□ 1.12
SCAP-201ENST00000265565 CFDP1Q9UEE9 299 aaPredicted RBP22.01■■□□□ 1.11
SCAP-201ENST00000265565 NEFMP07197 916 aa21.97■■□□□ 1.11
SCAP-201ENST00000265565 HSP90AA1P07900 732 aaKnown RBP21.96■■□□□ 1.11
SCAP-201ENST00000265565 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
SCAP-201ENST00000265565 ARHGAP35Q9NRY4 1499 aa21.92■■□□□ 1.1
SCAP-201ENST00000265565 DDRGK1Q96HY6 314 aa21.91■■□□□ 1.1
SCAP-201ENST00000265565 RGS3P49796 1198 aa21.9■■□□□ 1.1
SCAP-201ENST00000265565 PLEKHD1A6NEE1 506 aa21.89■■□□□ 1.09
SCAP-201ENST00000265565 CC2D1BQ5T0F9 858 aaKnown RBP21.88■■□□□ 1.09
SCAP-201ENST00000265565 PPM1GO15355 546 aaPredicted RBP21.87■■□□□ 1.09
SCAP-201ENST00000265565 L3MBTL2Q969R5 705 aa21.87■■□□□ 1.09
SCAP-201ENST00000265565 SLC24A1O60721 1099 aa21.86■■□□□ 1.09
SCAP-201ENST00000265565 MPHOSPH9Q99550 1183 aa21.86■■□□□ 1.09
SCAP-201ENST00000265565 ERICH6BQ5W0A0 696 aa21.85■■□□□ 1.09
SCAP-201ENST00000265565 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
SCAP-201ENST00000265565 KNSTRNQ9Y448 316 aa21.82■■□□□ 1.08
SCAP-201ENST00000265565 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
SCAP-201ENST00000265565 NEUROD2Q15784 382 aa21.79■■□□□ 1.08
SCAP-201ENST00000265565 FHOD3Q2V2M9 1422 aa21.78■■□□□ 1.08
SCAP-201ENST00000265565 ANP32BQ92688 251 aaKnown RBP21.76■■□□□ 1.07
SCAP-201ENST00000265565 PKD2Q13563 968 aa21.76■■□□□ 1.07
SCAP-201ENST00000265565 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
SCAP-201ENST00000265565 BECN1Q14457 450 aa21.73■■□□□ 1.07
SCAP-201ENST00000265565 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
SCAP-201ENST00000265565 NUDCQ9Y266 331 aa21.7■■□□□ 1.06
SCAP-201ENST00000265565 RCAN3Q9UKA8 241 aa21.7■■□□□ 1.06
SCAP-201ENST00000265565 PRKRIP1Q9H875 184 aaPredicted RBP21.7■■□□□ 1.06
SCAP-201ENST00000265565 FMN1Q68DA7 1419 aa21.69■■□□□ 1.06
SCAP-201ENST00000265565 TDRD9Q8NDG6 1382 aaKnown RBP21.69■■□□□ 1.06
SCAP-201ENST00000265565 FRAT1Q92837 279 aaPredicted RBP21.69■■□□□ 1.06
SCAP-201ENST00000265565 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
SCAP-201ENST00000265565 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
SCAP-201ENST00000265565 KIF21BO75037 1637 aa21.67■■□□□ 1.06
SCAP-201ENST00000265565 IPO9Q96P70 1041 aaKnown RBP21.66■■□□□ 1.06
SCAP-201ENST00000265565 TNNT2P45379 298 aaPredicted RBP21.65■■□□□ 1.06
SCAP-201ENST00000265565 CDCA8Q53HL2 280 aa21.61■■□□□ 1.05
SCAP-201ENST00000265565 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
SCAP-201ENST00000265565 TCERG1O14776 1098 aaKnown RBP21.59■■□□□ 1.05
SCAP-201ENST00000265565 FANCIQ9NVI1 1328 aa21.58■■□□□ 1.05
SCAP-201ENST00000265565 PHLDB1Q86UU1 1377 aa21.58■■□□□ 1.05
SCAP-201ENST00000265565 TMF1P82094 1093 aa21.58■■□□□ 1.05
SCAP-201ENST00000265565 GLIPR1L2Q4G1C9 344 aa21.58■■□□□ 1.05
SCAP-201ENST00000265565 ZBED9Q6R2W3 1325 aa21.54■■□□□ 1.04
SCAP-201ENST00000265565 KTN1Q86UP2 1357 aaKnown RBP21.53■■□□□ 1.04
SCAP-201ENST00000265565 FTSJ3Q8IY81 847 aaKnown RBP21.53■■□□□ 1.04
SCAP-201ENST00000265565 NUP155O75694 1391 aa21.52■■□□□ 1.04
SCAP-201ENST00000265565 RALBP1Q15311 655 aa21.52■■□□□ 1.04
SCAP-201ENST00000265565 IGF1RP08069 1367 aa21.52■■□□□ 1.03
SCAP-201ENST00000265565 ARAP1Q96P48 1450 aa21.52■■□□□ 1.03
SCAP-201ENST00000265565 CCDC18Q5T9S5 1454 aa21.51■■□□□ 1.03
SCAP-201ENST00000265565 TRIM44Q96DX7 344 aaPredicted RBP21.51■■□□□ 1.03
SCAP-201ENST00000265565 CFAP53Q96M91 514 aa21.5■■□□□ 1.03
SCAP-201ENST00000265565 SPRYD3Q8NCJ5 442 aa21.5■■□□□ 1.03
SCAP-201ENST00000265565 ST20-MTHFSA0A0A6YYL1 179 aa21.49■■□□□ 1.03
SCAP-201ENST00000265565 EXOC6Q8TAG9 804 aa21.49■■□□□ 1.03
SCAP-201ENST00000265565 PLIN1O60240 522 aa21.48■■□□□ 1.03
SCAP-201ENST00000265565 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms