RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
PTPN23-201ENST00000265562 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
PTPN23-201ENST00000265562 GOLGA6L22H0YM25 854 aa18.42■□□□□ 0.54
PTPN23-201ENST00000265562 KDM2AQ9Y2K7 1162 aa18.42■□□□□ 0.54
PTPN23-201ENST00000265562 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
PTPN23-201ENST00000265562 TNNT2P45379 298 aaPredicted RBP18.4■□□□□ 0.54
PTPN23-201ENST00000265562 CHGAP10645 457 aaKnown RBP18.39■□□□□ 0.54
PTPN23-201ENST00000265562 NAP1L5Q96NT1 182 aaPredicted RBP18.38■□□□□ 0.53
PTPN23-201ENST00000265562 DEKP35659 375 aaKnown RBP18.37■□□□□ 0.53
PTPN23-201ENST00000265562 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
PTPN23-201ENST00000265562 MTUS2Q5JR59 1369 aa18.37■□□□□ 0.53
PTPN23-201ENST00000265562 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
PTPN23-201ENST00000265562 RBM19Q9Y4C8 960 aaKnown RBP18.35■□□□□ 0.53
PTPN23-201ENST00000265562 GOLGA3Q08378 1498 aa18.32■□□□□ 0.52
PTPN23-201ENST00000265562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.527e-7■■□□□ 13.5
PTPN23-201ENST00000265562 EEA1Q15075 1411 aa18.31■□□□□ 0.52
PTPN23-201ENST00000265562 B4GALNT3Q6L9W6 998 aa18.3■□□□□ 0.52
PTPN23-201ENST00000265562 PTMAP06454 111 aaKnown RBP18.29■□□□□ 0.52
PTPN23-201ENST00000265562 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
PTPN23-201ENST00000265562 RRP7BPQ9NSQ0 103 aa18.29■□□□□ 0.52
PTPN23-201ENST00000265562 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
PTPN23-201ENST00000265562 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
PTPN23-201ENST00000265562 DNTTIP2Q5QJE6 756 aaKnown RBP18.25■□□□□ 0.51
PTPN23-201ENST00000265562 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
PTPN23-201ENST00000265562 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
PTPN23-201ENST00000265562 RGS3P49796 1198 aa18.22■□□□□ 0.51
PTPN23-201ENST00000265562 RB1CC1Q8TDY2 1594 aa18.2■□□□□ 0.5
PTPN23-201ENST00000265562 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
PTPN23-201ENST00000265562 SIN3AQ96ST3 1273 aa18.19■□□□□ 0.5
PTPN23-201ENST00000265562 TSHZ2Q9NRE2 1034 aa18.18■□□□□ 0.5
PTPN23-201ENST00000265562 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
PTPN23-201ENST00000265562 L1TD1Q5T7N2 865 aaKnown RBP18.16■□□□□ 0.5
PTPN23-201ENST00000265562 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
PTPN23-201ENST00000265562 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.49
PTPN23-201ENST00000265562 CASC1Q6TDU7 716 aa18.13■□□□□ 0.49
PTPN23-201ENST00000265562 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
PTPN23-201ENST00000265562 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
PTPN23-201ENST00000265562 CFAP53Q96M91 514 aa18.11■□□□□ 0.49
PTPN23-201ENST00000265562 CDCA8Q53HL2 280 aa18.1■□□□□ 0.49
PTPN23-201ENST00000265562 NACADO15069 1562 aa18.08■□□□□ 0.49
PTPN23-201ENST00000265562 TIMELESSQ9UNS1 1208 aa18.08■□□□□ 0.49
PTPN23-201ENST00000265562 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.48
PTPN23-201ENST00000265562 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
PTPN23-201ENST00000265562 ZRSR1Q15695 479 aaKnown RBP18.06■□□□□ 0.48
PTPN23-201ENST00000265562 RGL3Q3MIN7 710 aa18.06■□□□□ 0.48
PTPN23-201ENST00000265562 FRAT1Q92837 279 aaPredicted RBP18.05■□□□□ 0.48
PTPN23-201ENST00000265562 TPRNQ4KMQ1 711 aa18.03■□□□□ 0.48
PTPN23-201ENST00000265562 CDK11BP21127 795 aaKnown RBP18.03■□□□□ 0.48
PTPN23-201ENST00000265562 NPM1P06748 294 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPN23-201ENST00000265562 MSNP26038 577 aaKnown RBP18.03■□□□□ 0.48
PTPN23-201ENST00000265562 NEUROD2Q15784 382 aa18.03■□□□□ 0.48
PTPN23-201ENST00000265562 PLCB2Q00722 1185 aa18.02■□□□□ 0.48
PTPN23-201ENST00000265562 HSCBQ8IWL3 235 aa18.02■□□□□ 0.48
PTPN23-201ENST00000265562 WRNQ14191 1432 aaPredicted RBP eCLIP18.01■□□□□ 0.47
PTPN23-201ENST00000265562 CCNB3Q8WWL7 1395 aa18■□□□□ 0.47
PTPN23-201ENST00000265562 MS4A1P11836 297 aa17.99■□□□□ 0.47
PTPN23-201ENST00000265562 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.97■□□□□ 0.47
PTPN23-201ENST00000265562 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
PTPN23-201ENST00000265562 TCERG1O14776 1098 aaKnown RBP17.96■□□□□ 0.47
PTPN23-201ENST00000265562 CC2D1BQ5T0F9 858 aaKnown RBP17.96■□□□□ 0.47
PTPN23-201ENST00000265562 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
PTPN23-201ENST00000265562 IPO9Q96P70 1041 aaKnown RBP17.96■□□□□ 0.47
PTPN23-201ENST00000265562 CHAF1AQ13111 956 aaPredicted RBP17.95■□□□□ 0.46
PTPN23-201ENST00000265562 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
PTPN23-201ENST00000265562 PNNQ9H307 717 aaKnown RBP17.94■□□□□ 0.46
PTPN23-201ENST00000265562 SPRYD3Q8NCJ5 442 aa17.92■□□□□ 0.46
PTPN23-201ENST00000265562 BAZ1BQ9UIG0 1483 aaKnown RBP17.92■□□□□ 0.46
PTPN23-201ENST00000265562 GOLGA6L6A8MZA4 724 aa17.92■□□□□ 0.46
PTPN23-201ENST00000265562 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
PTPN23-201ENST00000265562 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
PTPN23-201ENST00000265562 HSPA5P11021 654 aaKnown RBP17.91■□□□□ 0.46
PTPN23-201ENST00000265562 CFDP1Q9UEE9 299 aaPredicted RBP17.9■□□□□ 0.46
PTPN23-201ENST00000265562 KIF27Q86VH2 1401 aa17.89■□□□□ 0.46
PTPN23-201ENST00000265562 PLEKHD1A6NEE1 506 aa17.89■□□□□ 0.45
PTPN23-201ENST00000265562 NRDCO43847 1150 aa17.88■□□□□ 0.45
PTPN23-201ENST00000265562 SETD5Q9C0A6 1442 aa17.87■□□□□ 0.45
PTPN23-201ENST00000265562 RCAN3Q9UKA8 241 aa17.87■□□□□ 0.45
PTPN23-201ENST00000265562 PTMSP20962 102 aa17.85■□□□□ 0.45
PTPN23-201ENST00000265562 GBP4Q96PP9 640 aa17.85■□□□□ 0.45
PTPN23-201ENST00000265562 GZF1Q9H116 711 aaPredicted RBP17.84■□□□□ 0.45
PTPN23-201ENST00000265562 TMF1P82094 1093 aa17.84■□□□□ 0.45
PTPN23-201ENST00000265562 SLKQ9H2G2 1235 aaPredicted RBP17.84■□□□□ 0.45
PTPN23-201ENST00000265562 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.45
PTPN23-201ENST00000265562 GOLGA6L3A6NEY3 463 aa17.82■□□□□ 0.44
PTPN23-201ENST00000265562 GOLGA6L4A6NEF3 574 aa17.81■□□□□ 0.44
PTPN23-201ENST00000265562 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
PTPN23-201ENST00000265562 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
PTPN23-201ENST00000265562 CFAP44Q96MT7 982 aa17.8■□□□□ 0.44
PTPN23-201ENST00000265562 USP35Q9P2H5 1018 aa17.8■□□□□ 0.44
PTPN23-201ENST00000265562 VPS8Q8N3P4 1428 aa17.79■□□□□ 0.44
PTPN23-201ENST00000265562 DCAF11Q8TEB1 546 aa17.78■□□□□ 0.44
PTPN23-201ENST00000265562 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
PTPN23-201ENST00000265562 U2SURPO15042 1029 aaKnown RBP17.78■□□□□ 0.44
PTPN23-201ENST00000265562 KTN1Q86UP2 1357 aaKnown RBP17.77■□□□□ 0.44
PTPN23-201ENST00000265562 PPP1R15AO75807 674 aaPredicted RBP17.77■□□□□ 0.44
PTPN23-201ENST00000265562 MCCP23508 829 aa17.77■□□□□ 0.43
PTPN23-201ENST00000265562 KIAA2012Q0VF49 1180 aa17.77■□□□□ 0.43
PTPN23-201ENST00000265562 ZBTB7CA1YPR0 619 aa17.76■□□□□ 0.43
PTPN23-201ENST00000265562 DRC7Q8IY82 874 aa17.76■□□□□ 0.43
PTPN23-201ENST00000265562 KCNJ4P48050 445 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms