RNA–Protein interactions for RNA: ENST00000264705.8

CAD-201, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAD, Length 7,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-201ENST00000264705 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
CAD-201ENST00000264705 LMOD2Q6P5Q4 547 aa16.54■□□□□ 0.24
CAD-201ENST00000264705 KCNH8Q96L42 1107 aa16.52■□□□□ 0.24
CAD-201ENST00000264705 TAOK2Q9UL54 1235 aa16.52■□□□□ 0.24
CAD-201ENST00000264705 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
CAD-201ENST00000264705 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
CAD-201ENST00000264705 TPRNQ4KMQ1 711 aa16.47■□□□□ 0.23
CAD-201ENST00000264705 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
CAD-201ENST00000264705 MRS2Q9HD23 443 aa16.45■□□□□ 0.22
CAD-201ENST00000264705 PPM1GO15355 546 aaPredicted RBP16.44■□□□□ 0.22
CAD-201ENST00000264705 NBR1Q14596 966 aa16.38■□□□□ 0.21
CAD-201ENST00000264705 RRP7BPQ9NSQ0 103 aa16.37■□□□□ 0.21
CAD-201ENST00000264705 CLSTN1O94985 981 aa16.34■□□□□ 0.21
CAD-201ENST00000264705 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
CAD-201ENST00000264705 PLEKHD1A6NEE1 506 aa16.34■□□□□ 0.21
CAD-201ENST00000264705 NCLP19338 710 aaKnown RBP16.33■□□□□ 0.21
CAD-201ENST00000264705 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.2
CAD-201ENST00000264705 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
CAD-201ENST00000264705 RGL3Q3MIN7 710 aa16.32■□□□□ 0.2
CAD-201ENST00000264705 CFAP53Q96M91 514 aa16.31■□□□□ 0.2
CAD-201ENST00000264705 IRX6P78412 446 aaPredicted RBP16.31■□□□□ 0.2
CAD-201ENST00000264705 ZRSR1Q15695 479 aaKnown RBP16.31■□□□□ 0.2
CAD-201ENST00000264705 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
CAD-201ENST00000264705 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
CAD-201ENST00000264705 SENP3-EIF4A1A0A087X0R7 540 aa16.27■□□□□ 0.19
CAD-201ENST00000264705 BECN1Q14457 450 aa16.26■□□□□ 0.19
CAD-201ENST00000264705 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
CAD-201ENST00000264705 GLIPR1L2Q4G1C9 344 aa16.26■□□□□ 0.19
CAD-201ENST00000264705 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
CAD-201ENST00000264705 CLIP1P30622 1438 aa16.24■□□□□ 0.19
CAD-201ENST00000264705 CDCA8Q53HL2 280 aa16.24■□□□□ 0.19
CAD-201ENST00000264705 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
CAD-201ENST00000264705 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
CAD-201ENST00000264705 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
CAD-201ENST00000264705 MLECQ14165 292 aa16.22■□□□□ 0.19
CAD-201ENST00000264705 FTSJ3Q8IY81 847 aaKnown RBP16.22■□□□□ 0.19
CAD-201ENST00000264705 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
CAD-201ENST00000264705 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
CAD-201ENST00000264705 OS9Q13438 667 aaPredicted RBP16.21■□□□□ 0.18
CAD-201ENST00000264705 GOLGA6L22H0YM25 854 aa16.2■□□□□ 0.18
CAD-201ENST00000264705 POGKQ9P215 609 aa16.2■□□□□ 0.18
CAD-201ENST00000264705 SOX12O15370 315 aa16.2■□□□□ 0.18
CAD-201ENST00000264705 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
CAD-201ENST00000264705 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
CAD-201ENST00000264705 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
CAD-201ENST00000264705 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
CAD-201ENST00000264705 NEUROD2Q15784 382 aa16.17■□□□□ 0.18
CAD-201ENST00000264705 TNNT2P45379 298 aaPredicted RBP16.16■□□□□ 0.18
CAD-201ENST00000264705 TRIM44Q96DX7 344 aaPredicted RBP16.16■□□□□ 0.18
CAD-201ENST00000264705 FGD1P98174 961 aa16.15■□□□□ 0.18
CAD-201ENST00000264705 CARD11Q9BXL7 1154 aa16.14■□□□□ 0.18
CAD-201ENST00000264705 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
CAD-201ENST00000264705 NUDCQ9Y266 331 aa16.14■□□□□ 0.17
CAD-201ENST00000264705 GOLGA3Q08378 1498 aa16.12■□□□□ 0.17
CAD-201ENST00000264705 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
CAD-201ENST00000264705 MIER1Q8N108 512 aa16.11■□□□□ 0.17
CAD-201ENST00000264705 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
CAD-201ENST00000264705 ANP32EQ9BTT0 268 aa16.1■□□□□ 0.17
CAD-201ENST00000264705 KCNJ4P48050 445 aa16.09■□□□□ 0.17
CAD-201ENST00000264705 PLCB2Q00722 1185 aa16.08■□□□□ 0.17
CAD-201ENST00000264705 DNTTIP2Q5QJE6 756 aaKnown RBP16.07■□□□□ 0.16
CAD-201ENST00000264705 PRM3Q9NNZ6 103 aa16.07■□□□□ 0.16
CAD-201ENST00000264705 BAZ1BQ9UIG0 1483 aaKnown RBP16.06■□□□□ 0.16
CAD-201ENST00000264705 ZNF330Q9Y3S2 320 aaPredicted RBP16.06■□□□□ 0.16
CAD-201ENST00000264705 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
CAD-201ENST00000264705 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
CAD-201ENST00000264705 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
CAD-201ENST00000264705 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.04■□□□□ 0.16
CAD-201ENST00000264705 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
CAD-201ENST00000264705 KANK1Q14678 1352 aa16.03■□□□□ 0.16
CAD-201ENST00000264705 TMX4Q9H1E5 349 aaPredicted RBP16.02■□□□□ 0.16
CAD-201ENST00000264705 KIF27Q86VH2 1401 aa16.02■□□□□ 0.15
CAD-201ENST00000264705 HDGFP51858 240 aaKnown RBP16.02■□□□□ 0.15
CAD-201ENST00000264705 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.15
CAD-201ENST00000264705 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.15
CAD-201ENST00000264705 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
CAD-201ENST00000264705 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
CAD-201ENST00000264705 PAK3O75914 559 aaPredicted RBP16.01■□□□□ 0.15
CAD-201ENST00000264705 EEA1Q15075 1411 aa16■□□□□ 0.15
CAD-201ENST00000264705 SAFB2Q14151 953 aaKnown RBP eCLIP15.99■□□□□ 0.15
CAD-201ENST00000264705 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
CAD-201ENST00000264705 GOLGA6L6A8MZA4 724 aa15.97■□□□□ 0.15
CAD-201ENST00000264705 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
CAD-201ENST00000264705 HSP90AB1P08238 724 aaKnown RBP15.97■□□□□ 0.15
CAD-201ENST00000264705 MS4A1P11836 297 aa15.96■□□□□ 0.15
CAD-201ENST00000264705 SRPK2P78362 688 aaKnown RBP15.96■□□□□ 0.15
CAD-201ENST00000264705 CCNB3Q8WWL7 1395 aa15.96■□□□□ 0.15
CAD-201ENST00000264705 SUPT16HQ9Y5B9 1047 aaKnown RBP15.95■□□□□ 0.14
CAD-201ENST00000264705 G3V3G9 751 aa15.95■□□□□ 0.14
CAD-201ENST00000264705 RGS3P49796 1198 aa15.95■□□□□ 0.14
CAD-201ENST00000264705 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
CAD-201ENST00000264705 TMF1P82094 1093 aa15.93■□□□□ 0.14
CAD-201ENST00000264705 GNL2Q13823 731 aaKnown RBP15.92■□□□□ 0.14
CAD-201ENST00000264705 STK26Q9P289 416 aa15.9■□□□□ 0.14
CAD-201ENST00000264705 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
CAD-201ENST00000264705 DCAF11Q8TEB1 546 aa15.9■□□□□ 0.14
CAD-201ENST00000264705 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
CAD-201ENST00000264705 PDE4CQ08493 712 aa15.89■□□□□ 0.13
CAD-201ENST00000264705 AEBP2Q6ZN18 517 aaPredicted RBP15.88■□□□□ 0.13
CAD-201ENST00000264705 GOLGA6L4A6NEF3 574 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms