RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 HIRIP3Q9BW71 556 aaPredicted RBP25.56■■□□□ 1.68
NECTIN1-201ENST00000264025 RRP7BPQ9NSQ0 103 aa25.54■■□□□ 1.68
NECTIN1-201ENST00000264025 PPP1R15AO75807 674 aaPredicted RBP25.5■■□□□ 1.67
NECTIN1-201ENST00000264025 A0A0G2JS52 829 aa25.49■■□□□ 1.67
NECTIN1-201ENST00000264025 BECN1Q14457 450 aa25.48■■□□□ 1.67
NECTIN1-201ENST00000264025 RSF1Q96T23 1441 aaPredicted RBP25.47■■□□□ 1.67
NECTIN1-201ENST00000264025 DDRGK1Q96HY6 314 aa25.47■■□□□ 1.67
NECTIN1-201ENST00000264025 ZBTB7CA1YPR0 619 aa25.46■■□□□ 1.67
NECTIN1-201ENST00000264025 CDK11BP21127 795 aaKnown RBP25.45■■□□□ 1.66
NECTIN1-201ENST00000264025 C14orf37Q86TY3 774 aa25.45■■□□□ 1.66
NECTIN1-201ENST00000264025 PLEKHD1A6NEE1 506 aa25.42■■□□□ 1.66
NECTIN1-201ENST00000264025 NCLP19338 710 aaKnown RBP25.41■■□□□ 1.66
NECTIN1-201ENST00000264025 CFAP53Q96M91 514 aa25.41■■□□□ 1.66
NECTIN1-201ENST00000264025 KCNH8Q96L42 1107 aa25.4■■□□□ 1.66
NECTIN1-201ENST00000264025 SENP3Q9H4L4 574 aaPredicted RBP25.38■■□□□ 1.65
NECTIN1-201ENST00000264025 CDCA8Q53HL2 280 aa25.38■■□□□ 1.65
NECTIN1-201ENST00000264025 RGL3Q3MIN7 710 aa25.37■■□□□ 1.65
NECTIN1-201ENST00000264025 ANP32EQ9BTT0 268 aa25.36■■□□□ 1.65
NECTIN1-201ENST00000264025 GOLGA6L22H0YM25 854 aa25.36■■□□□ 1.65
NECTIN1-201ENST00000264025 PLEKHG5O94827 1062 aa25.36■■□□□ 1.65
NECTIN1-201ENST00000264025 GOLGA3Q08378 1498 aa25.35■■□□□ 1.65
NECTIN1-201ENST00000264025 EEA1Q15075 1411 aa25.34■■□□□ 1.65
NECTIN1-201ENST00000264025 KNSTRNQ9Y448 316 aa25.32■■□□□ 1.64
NECTIN1-201ENST00000264025 TRIM44Q96DX7 344 aaPredicted RBP25.31■■□□□ 1.64
NECTIN1-201ENST00000264025 CEP162Q5TB80 1403 aa25.28■■□□□ 1.64
NECTIN1-201ENST00000264025 CFDP1Q9UEE9 299 aaPredicted RBP25.25■■□□□ 1.63
NECTIN1-201ENST00000264025 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
NECTIN1-201ENST00000264025 CASC1Q6TDU7 716 aa25.25■■□□□ 1.63
NECTIN1-201ENST00000264025 CARD11Q9BXL7 1154 aa25.24■■□□□ 1.63
NECTIN1-201ENST00000264025 FTSJ3Q8IY81 847 aaKnown RBP25.24■■□□□ 1.63
NECTIN1-201ENST00000264025 PPM1GO15355 546 aaPredicted RBP25.21■■□□□ 1.63
NECTIN1-201ENST00000264025 HAP1P54257 671 aaPredicted RBP25.2■■□□□ 1.62
NECTIN1-201ENST00000264025 ZRSR1Q15695 479 aaKnown RBP25.18■■□□□ 1.62
NECTIN1-201ENST00000264025 MAPK8IP3Q9UPT6 1336 aa25.18■■□□□ 1.62
NECTIN1-201ENST00000264025 ARID4BQ4LE39 1312 aaPredicted RBP25.15■■□□□ 1.62
NECTIN1-201ENST00000264025 SENP3-EIF4A1A0A087X0R7 540 aa25.15■■□□□ 1.62
NECTIN1-201ENST00000264025 SUPT16HQ9Y5B9 1047 aaKnown RBP25.15■■□□□ 1.62
NECTIN1-201ENST00000264025 NUDCQ9Y266 331 aa25.15■■□□□ 1.62
NECTIN1-201ENST00000264025 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
NECTIN1-201ENST00000264025 PTMAP06454 111 aaKnown RBP25.12■■□□□ 1.61
NECTIN1-201ENST00000264025 NEUROD2Q15784 382 aa25.12■■□□□ 1.61
NECTIN1-201ENST00000264025 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
NECTIN1-201ENST00000264025 LAS1LQ9Y4W2 734 aaKnown RBP25.1■■□□□ 1.61
NECTIN1-201ENST00000264025 POGKQ9P215 609 aa25.07■■□□□ 1.6
NECTIN1-201ENST00000264025 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
NECTIN1-201ENST00000264025 TNIKQ9UKE5 1360 aa25.05■■□□□ 1.6
NECTIN1-201ENST00000264025 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
NECTIN1-201ENST00000264025 CHMP4BQ9H444 224 aaKnown RBP25.04■■□□□ 1.6
NECTIN1-201ENST00000264025 PPP4R2Q9NY27 417 aa25.03■■□□□ 1.6
NECTIN1-201ENST00000264025 FRAT1Q92837 279 aaPredicted RBP25.01■■□□□ 1.59
NECTIN1-201ENST00000264025 RGS3P49796 1198 aa25■■□□□ 1.59
NECTIN1-201ENST00000264025 MS4A1P11836 297 aa24.99■■□□□ 1.59
NECTIN1-201ENST00000264025 TPRNQ4KMQ1 711 aa24.99■■□□□ 1.59
NECTIN1-201ENST00000264025 BAZ1BQ9UIG0 1483 aaKnown RBP24.99■■□□□ 1.59
NECTIN1-201ENST00000264025 DNTTIP2Q5QJE6 756 aaKnown RBP24.99■■□□□ 1.59
NECTIN1-201ENST00000264025 SIN3AQ96ST3 1273 aa24.97■■□□□ 1.59
NECTIN1-201ENST00000264025 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
NECTIN1-201ENST00000264025 LMOD2Q6P5Q4 547 aa24.96■■□□□ 1.59
NECTIN1-201ENST00000264025 TNNT2P45379 298 aaPredicted RBP24.96■■□□□ 1.59
NECTIN1-201ENST00000264025 CC2D1BQ5T0F9 858 aaKnown RBP24.95■■□□□ 1.58
NECTIN1-201ENST00000264025 PNNQ9H307 717 aaKnown RBP24.94■■□□□ 1.58
NECTIN1-201ENST00000264025 ERICH6BQ5W0A0 696 aa24.93■■□□□ 1.58
NECTIN1-201ENST00000264025 U2SURPO15042 1029 aaKnown RBP24.93■■□□□ 1.58
NECTIN1-201ENST00000264025 OS9Q13438 667 aaPredicted RBP24.92■■□□□ 1.58
NECTIN1-201ENST00000264025 CCNB3Q8WWL7 1395 aa24.9■■□□□ 1.58
NECTIN1-201ENST00000264025 TMF1P82094 1093 aa24.89■■□□□ 1.58
NECTIN1-201ENST00000264025 HSP90AB1P08238 724 aaKnown RBP24.89■■□□□ 1.57
NECTIN1-201ENST00000264025 FGD1P98174 961 aa24.87■■□□□ 1.57
NECTIN1-201ENST00000264025 NPHP1O15259 732 aa24.85■■□□□ 1.57
NECTIN1-201ENST00000264025 NOP58Q9Y2X3 529 aaKnown RBP24.85■■□□□ 1.57
NECTIN1-201ENST00000264025 KCNJ4P48050 445 aa24.84■■□□□ 1.57
NECTIN1-201ENST00000264025 PLCB2Q00722 1185 aa24.84■■□□□ 1.57
NECTIN1-201ENST00000264025 TULP1O00294 542 aaPredicted RBP24.83■■□□□ 1.57
NECTIN1-201ENST00000264025 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.56
NECTIN1-201ENST00000264025 GOLGA6L6A8MZA4 724 aa24.82■■□□□ 1.56
NECTIN1-201ENST00000264025 DCAF11Q8TEB1 546 aa24.82■■□□□ 1.56
NECTIN1-201ENST00000264025 KANK1Q14678 1352 aa24.82■■□□□ 1.56
NECTIN1-201ENST00000264025 TAOK2Q9UL54 1235 aa24.8■■□□□ 1.56
NECTIN1-201ENST00000264025 NAP1L5Q96NT1 182 aaPredicted RBP24.78■■□□□ 1.56
NECTIN1-201ENST00000264025 B4GALNT3Q6L9W6 998 aa24.77■■□□□ 1.56
NECTIN1-201ENST00000264025 ERCC6Q03468 1493 aa24.76■■□□□ 1.55
NECTIN1-201ENST00000264025 TIMELESSQ9UNS1 1208 aa24.76■■□□□ 1.55
NECTIN1-201ENST00000264025 NAP1L2Q9ULW6 460 aaPredicted RBP24.76■■□□□ 1.55
NECTIN1-201ENST00000264025 NRDCO43847 1150 aa24.75■■□□□ 1.55
NECTIN1-201ENST00000264025 HSCBQ8IWL3 235 aa24.75■■□□□ 1.55
NECTIN1-201ENST00000264025 HDGFP51858 240 aaKnown RBP24.75■■□□□ 1.55
NECTIN1-201ENST00000264025 GOLGA2Q08379 1002 aa24.74■■□□□ 1.55
NECTIN1-201ENST00000264025 SRPK2P78362 688 aaKnown RBP24.73■■□□□ 1.55
NECTIN1-201ENST00000264025 MORC1Q86VD1 984 aa24.72■■□□□ 1.55
NECTIN1-201ENST00000264025 GOLGA6L4A6NEF3 574 aa24.72■■□□□ 1.55
NECTIN1-201ENST00000264025 NACADO15069 1562 aa24.7■■□□□ 1.54
NECTIN1-201ENST00000264025 MCCP23508 829 aa24.69■■□□□ 1.54
NECTIN1-201ENST00000264025 CCER2I3L3R5 266 aa24.67■■□□□ 1.54
NECTIN1-201ENST00000264025 CFAP44Q96MT7 982 aa24.67■■□□□ 1.54
NECTIN1-201ENST00000264025 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
NECTIN1-201ENST00000264025 SOX12O15370 315 aa24.65■■□□□ 1.54
NECTIN1-201ENST00000264025 CARMIL1Q5VZK9 1371 aa24.65■■□□□ 1.54
NECTIN1-201ENST00000264025 RTF1Q92541 710 aaKnown RBP24.62■■□□□ 1.53
NECTIN1-201ENST00000264025 RTN4Q9NQC3 1192 aaKnown RBP24.62■■□□□ 1.53
NECTIN1-201ENST00000264025 SAFB2Q14151 953 aaKnown RBP eCLIP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms