RNA–Protein interactions for RNA: ENST00000261917.3

HCN4-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN4, Length 7,228 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4-201ENST00000261917 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
HCN4-201ENST00000261917 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
HCN4-201ENST00000261917 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
HCN4-201ENST00000261917 LMOD2Q6P5Q4 547 aa24.16■■□□□ 1.46
HCN4-201ENST00000261917 CDK11BP21127 795 aaKnown RBP24.16■■□□□ 1.46
HCN4-201ENST00000261917 CCDC136Q96JN2 1154 aa24.15■■□□□ 1.46
HCN4-201ENST00000261917 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.15■■□□□ 1.46
HCN4-201ENST00000261917 RGL3Q3MIN7 710 aa24.14■■□□□ 1.46
HCN4-201ENST00000261917 RRP7BPQ9NSQ0 103 aa24.14■■□□□ 1.45
HCN4-201ENST00000261917 ACIN1Q9UKV3 1341 aaKnown RBP24.13■■□□□ 1.45
HCN4-201ENST00000261917 MYH16Q9H6N6 1097 aa24.12■■□□□ 1.45
HCN4-201ENST00000261917 MRS2Q9HD23 443 aa24.07■■□□□ 1.44
HCN4-201ENST00000261917 NPHP1O15259 732 aa24.07■■□□□ 1.44
HCN4-201ENST00000261917 LAS1LQ9Y4W2 734 aaKnown RBP24.05■■□□□ 1.44
HCN4-201ENST00000261917 MTUS2Q5JR59 1369 aa24.02■■□□□ 1.44
HCN4-201ENST00000261917 TRHP20396 242 aaPredicted RBP23.97■■□□□ 1.43
HCN4-201ENST00000261917 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
HCN4-201ENST00000261917 NEUROD2Q15784 382 aa23.91■■□□□ 1.42
HCN4-201ENST00000261917 NCBP3Q53F19 620 aaKnown RBP23.9■■□□□ 1.42
HCN4-201ENST00000261917 NCLP19338 710 aaKnown RBP23.87■■□□□ 1.41
HCN4-201ENST00000261917 SOX12O15370 315 aa23.86■■□□□ 1.41
HCN4-201ENST00000261917 MLECQ14165 292 aa23.85■■□□□ 1.41
HCN4-201ENST00000261917 PLEKHD1A6NEE1 506 aa23.78■■□□□ 1.4
HCN4-201ENST00000261917 POGKQ9P215 609 aa23.76■■□□□ 1.39
HCN4-201ENST00000261917 EIF4G2P78344 907 aaKnown RBP eCLIP23.75■■□□□ 1.39
HCN4-201ENST00000261917 FTSJ3Q8IY81 847 aaKnown RBP23.74■■□□□ 1.39
HCN4-201ENST00000261917 NAP1L2Q9ULW6 460 aaPredicted RBP23.73■■□□□ 1.39
HCN4-201ENST00000261917 MIER1Q8N108 512 aa23.69■■□□□ 1.38
HCN4-201ENST00000261917 CFAP53Q96M91 514 aa23.69■■□□□ 1.38
HCN4-201ENST00000261917 KNSTRNQ9Y448 316 aa23.69■■□□□ 1.38
HCN4-201ENST00000261917 CC2D1BQ5T0F9 858 aaKnown RBP23.68■■□□□ 1.38
HCN4-201ENST00000261917 OS9Q13438 667 aaPredicted RBP23.67■■□□□ 1.38
HCN4-201ENST00000261917 ZRSR1Q15695 479 aaKnown RBP23.67■■□□□ 1.38
HCN4-201ENST00000261917 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
HCN4-201ENST00000261917 SAFB2Q14151 953 aaKnown RBP eCLIP23.65■■□□□ 1.38
HCN4-201ENST00000261917 GOLGA2Q08379 1002 aa23.64■■□□□ 1.38
HCN4-201ENST00000261917 U2SURPO15042 1029 aaKnown RBP23.64■■□□□ 1.37
HCN4-201ENST00000261917 ZCCHC6Q5VYS8 1495 aaKnown RBP23.64■■□□□ 1.37
HCN4-201ENST00000261917 FRAT1Q92837 279 aaPredicted RBP23.63■■□□□ 1.37
HCN4-201ENST00000261917 CLSTN1O94985 981 aa23.63■■□□□ 1.37
HCN4-201ENST00000261917 CASC1Q6TDU7 716 aa23.63■■□□□ 1.37
HCN4-201ENST00000261917 CFDP1Q9UEE9 299 aaPredicted RBP23.63■■□□□ 1.37
HCN4-201ENST00000261917 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
HCN4-201ENST00000261917 CARD11Q9BXL7 1154 aa23.62■■□□□ 1.37
HCN4-201ENST00000261917 ISY1Q9ULR0 285 aaKnown RBP23.61■■□□□ 1.37
HCN4-201ENST00000261917 BECN1Q14457 450 aa23.59■■□□□ 1.37
HCN4-201ENST00000261917 PLCB2Q00722 1185 aa23.59■■□□□ 1.37
HCN4-201ENST00000261917 PTMAP06454 111 aaKnown RBP23.58■■□□□ 1.37
HCN4-201ENST00000261917 TRIM44Q96DX7 344 aaPredicted RBP23.57■■□□□ 1.36
HCN4-201ENST00000261917 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
HCN4-201ENST00000261917 CLIP1P30622 1438 aa23.54■■□□□ 1.36
HCN4-201ENST00000261917 FGD1P98174 961 aa23.54■■□□□ 1.36
HCN4-201ENST00000261917 DNTTIP2Q5QJE6 756 aaKnown RBP23.52■■□□□ 1.36
HCN4-201ENST00000261917 RGS3P49796 1198 aa23.51■■□□□ 1.35
HCN4-201ENST00000261917 GOLGA6L22H0YM25 854 aa23.5■■□□□ 1.35
HCN4-201ENST00000261917 KCNJ4P48050 445 aa23.5■■□□□ 1.35
HCN4-201ENST00000261917 ZNF330Q9Y3S2 320 aaPredicted RBP23.49■■□□□ 1.35
HCN4-201ENST00000261917 STK26Q9P289 416 aa23.49■■□□□ 1.35
HCN4-201ENST00000261917 GLIPR1L2Q4G1C9 344 aa23.48■■□□□ 1.35
HCN4-201ENST00000261917 PAK3O75914 559 aaPredicted RBP23.48■■□□□ 1.35
HCN4-201ENST00000261917 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
HCN4-201ENST00000261917 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
HCN4-201ENST00000261917 RSF1Q96T23 1441 aaPredicted RBP23.46■■□□□ 1.35
HCN4-201ENST00000261917 DDRGK1Q96HY6 314 aa23.45■■□□□ 1.34
HCN4-201ENST00000261917 SRPK2P78362 688 aaKnown RBP23.45■■□□□ 1.34
HCN4-201ENST00000261917 NUDCQ9Y266 331 aa23.44■■□□□ 1.34
HCN4-201ENST00000261917 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
HCN4-201ENST00000261917 CCDC9Q9Y3X0 531 aaKnown RBP23.41■■□□□ 1.34
HCN4-201ENST00000261917 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
HCN4-201ENST00000261917 SPRYD3Q8NCJ5 442 aa23.4■■□□□ 1.34
HCN4-201ENST00000261917 APBB1O00213 710 aa23.38■■□□□ 1.33
HCN4-201ENST00000261917 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
HCN4-201ENST00000261917 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.36■■□□□ 1.33
HCN4-201ENST00000261917 GGT6Q6P531 493 aa23.35■■□□□ 1.33
HCN4-201ENST00000261917 DCAF11Q8TEB1 546 aa23.35■■□□□ 1.33
HCN4-201ENST00000261917 CSB-PGBD3P0DP91 1061 aa23.32■■□□□ 1.32
HCN4-201ENST00000261917 RTN4Q9NQC3 1192 aaKnown RBP23.29■■□□□ 1.32
HCN4-201ENST00000261917 DCAF1Q9Y4B6 1507 aa23.25■■□□□ 1.31
HCN4-201ENST00000261917 RTF1Q92541 710 aaKnown RBP23.25■■□□□ 1.31
HCN4-201ENST00000261917 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
HCN4-201ENST00000261917 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
HCN4-201ENST00000261917 NUTM2DQ5VT03 806 aaPredicted RBP23.23■■□□□ 1.31
HCN4-201ENST00000261917 GOLGA3Q08378 1498 aa23.23■■□□□ 1.31
HCN4-201ENST00000261917 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
HCN4-201ENST00000261917 KANK1Q14678 1352 aa23.22■■□□□ 1.31
HCN4-201ENST00000261917 MORC1Q86VD1 984 aa23.21■■□□□ 1.31
HCN4-201ENST00000261917 FOXD1Q16676 465 aa23.21■■□□□ 1.31
HCN4-201ENST00000261917 ANO8Q9HCE9 1232 aaPredicted RBP23.18■■□□□ 1.3
HCN4-201ENST00000261917 GNL2Q13823 731 aaKnown RBP23.18■■□□□ 1.3
HCN4-201ENST00000261917 CHMP3Q9Y3E7 222 aa23.18■■□□□ 1.3
HCN4-201ENST00000261917 TMF1P82094 1093 aa23.17■■□□□ 1.3
HCN4-201ENST00000261917 CCNB3Q8WWL7 1395 aa23.17■■□□□ 1.3
HCN4-201ENST00000261917 PNNQ9H307 717 aaKnown RBP23.17■■□□□ 1.3
HCN4-201ENST00000261917 NAP1L5Q96NT1 182 aaPredicted RBP23.17■■□□□ 1.3
HCN4-201ENST00000261917 GOLGA6L4A6NEF3 574 aa23.16■■□□□ 1.3
HCN4-201ENST00000261917 B4GALNT3Q6L9W6 998 aa23.16■■□□□ 1.3
HCN4-201ENST00000261917 HDGFP51858 240 aaKnown RBP23.16■■□□□ 1.3
HCN4-201ENST00000261917 ERICH6BQ5W0A0 696 aa23.15■■□□□ 1.3
HCN4-201ENST00000261917 PDE4CQ08493 712 aa23.14■■□□□ 1.29
HCN4-201ENST00000261917 NUTM2FA1L443 756 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms