RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
SORL1-201ENST00000260197 TRIM44Q96DX7 344 aaPredicted RBP15.34■□□□□ 0.05
SORL1-201ENST00000260197 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
SORL1-201ENST00000260197 CDK11BP21127 795 aaKnown RBP15.34■□□□□ 0.05
SORL1-201ENST00000260197 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
SORL1-201ENST00000260197 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
SORL1-201ENST00000260197 CHGAP10645 457 aaKnown RBP15.32■□□□□ 0.04
SORL1-201ENST00000260197 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
SORL1-201ENST00000260197 MIER1Q8N108 512 aa15.32■□□□□ 0.04
SORL1-201ENST00000260197 NCLP19338 710 aaKnown RBP15.3■□□□□ 0.04
SORL1-201ENST00000260197 CASC1Q6TDU7 716 aa15.3■□□□□ 0.04
SORL1-201ENST00000260197 EIF4G2P78344 907 aaKnown RBP eCLIP15.29■□□□□ 0.04
SORL1-201ENST00000260197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.043e-7■□□□□ 9.6
SORL1-201ENST00000260197 CHIC2Q9UKJ5 165 aa15.27■□□□□ 0.03
SORL1-201ENST00000260197 IRX6P78412 446 aaPredicted RBP15.27■□□□□ 0.03
SORL1-201ENST00000260197 FTSJ3Q8IY81 847 aaKnown RBP15.23■□□□□ 0.03
SORL1-201ENST00000260197 KDM2AQ9Y2K7 1162 aa15.23■□□□□ 0.03
SORL1-201ENST00000260197 KIF27Q86VH2 1401 aa15.23■□□□□ 0.03
SORL1-201ENST00000260197 TSPY4P0CV99 314 aa15.22■□□□□ 0.03
SORL1-201ENST00000260197 TSPY10P0CW01 314 aa15.22■□□□□ 0.03
SORL1-201ENST00000260197 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
SORL1-201ENST00000260197 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.02
SORL1-201ENST00000260197 PTMAP06454 111 aaKnown RBP15.2■□□□□ 0.02
SORL1-201ENST00000260197 ERICH6BQ5W0A0 696 aa15.2■□□□□ 0.02
SORL1-201ENST00000260197 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
SORL1-201ENST00000260197 CDCA8Q53HL2 280 aa15.19■□□□□ 0.02
SORL1-201ENST00000260197 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
SORL1-201ENST00000260197 KNSTRNQ9Y448 316 aa15.17■□□□□ 0.02
SORL1-201ENST00000260197 CFAP53Q96M91 514 aa15.16■□□□□ 0.02
SORL1-201ENST00000260197 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
SORL1-201ENST00000260197 PPM1GO15355 546 aaPredicted RBP15.15■□□□□ 0.02
SORL1-201ENST00000260197 WIZO95785 1651 aa15.13■□□□□ 0.01
SORL1-201ENST00000260197 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
SORL1-201ENST00000260197 RRP7BPQ9NSQ0 103 aa15.12■□□□□ 0.01
SORL1-201ENST00000260197 GOLGA6L6A8MZA4 724 aa15.12■□□□□ 0.01
SORL1-201ENST00000260197 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
SORL1-201ENST00000260197 DNTTIP2Q5QJE6 756 aaKnown RBP15.11■□□□□ 0.01
SORL1-201ENST00000260197 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
SORL1-201ENST00000260197 ARHGAP35Q9NRY4 1499 aa15.11■□□□□ 0.01
SORL1-201ENST00000260197 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
SORL1-201ENST00000260197 CHMP4BQ9H444 224 aaKnown RBP15.09■□□□□ 0.01
SORL1-201ENST00000260197 PPP1R15AO75807 674 aaPredicted RBP15.09■□□□□ 0.01
SORL1-201ENST00000260197 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0.01
SORL1-201ENST00000260197 NAP1L5Q96NT1 182 aaPredicted RBP15.08■□□□□ 0.01
SORL1-201ENST00000260197 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0
SORL1-201ENST00000260197 PPP4R2Q9NY27 417 aa15.07■□□□□ 0
SORL1-201ENST00000260197 SMARCA2P51531 1590 aa15.06■□□□□ 0
SORL1-201ENST00000260197 ABCC8Q09428 1581 aa15.06■□□□□ 0
SORL1-201ENST00000260197 SUPT16HQ9Y5B9 1047 aaKnown RBP15.05■□□□□ 0
SORL1-201ENST00000260197 CHAF1AQ13111 956 aaPredicted RBP15.05■□□□□ -0
SORL1-201ENST00000260197 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
SORL1-201ENST00000260197 NRDCO43847 1150 aa15.03■□□□□ -0
SORL1-201ENST00000260197 MS4A1P11836 297 aa15.02■□□□□ -0
SORL1-201ENST00000260197 LAS1LQ9Y4W2 734 aaKnown RBP15.02■□□□□ -0
SORL1-201ENST00000260197 C14orf37Q86TY3 774 aa15.02□□□□□ -0.01
SORL1-201ENST00000260197 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
SORL1-201ENST00000260197 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
SORL1-201ENST00000260197 HSP90AB1P08238 724 aaKnown RBP15□□□□□ -0.01
SORL1-201ENST00000260197 A0A0G2JS52 829 aa14.99□□□□□ -0.01
SORL1-201ENST00000260197 CARD11Q9BXL7 1154 aa14.98□□□□□ -0.01
SORL1-201ENST00000260197 HSCBQ8IWL3 235 aa14.98□□□□□ -0.01
SORL1-201ENST00000260197 L1TD1Q5T7N2 865 aaKnown RBP14.97□□□□□ -0.01
SORL1-201ENST00000260197 KANK1Q14678 1352 aa14.97□□□□□ -0.01
SORL1-201ENST00000260197 CFDP1Q9UEE9 299 aaPredicted RBP14.97□□□□□ -0.01
SORL1-201ENST00000260197 RGS3P49796 1198 aa14.97□□□□□ -0.01
SORL1-201ENST00000260197 PLEKHD1A6NEE1 506 aa14.96□□□□□ -0.01
SORL1-201ENST00000260197 PNNQ9H307 717 aaKnown RBP14.96□□□□□ -0.02
SORL1-201ENST00000260197 TOP2AP11388 1531 aaKnown RBP14.94□□□□□ -0.02
SORL1-201ENST00000260197 VPS8Q8N3P4 1428 aa14.94□□□□□ -0.02
SORL1-201ENST00000260197 NUDCQ9Y266 331 aa14.93□□□□□ -0.02
SORL1-201ENST00000260197 SETD5Q9C0A6 1442 aa14.92□□□□□ -0.02
SORL1-201ENST00000260197 ZBTB7CA1YPR0 619 aa14.92□□□□□ -0.02
SORL1-201ENST00000260197 MSNP26038 577 aaKnown RBP14.92□□□□□ -0.02
SORL1-201ENST00000260197 FGD1P98174 961 aa14.92□□□□□ -0.02
SORL1-201ENST00000260197 PTMSP20962 102 aa14.91□□□□□ -0.02
SORL1-201ENST00000260197 TPRNQ4KMQ1 711 aa14.91□□□□□ -0.02
SORL1-201ENST00000260197 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
SORL1-201ENST00000260197 CFAP44Q96MT7 982 aa14.9□□□□□ -0.02
SORL1-201ENST00000260197 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
SORL1-201ENST00000260197 SMARCA4P51532 1647 aa14.9□□□□□ -0.02
SORL1-201ENST00000260197 CFAP65Q6ZU64 1925 aaKnown RBP14.9□□□□□ -0.02
SORL1-201ENST00000260197 MCCP23508 829 aa14.89□□□□□ -0.03
SORL1-201ENST00000260197 OS9Q13438 667 aaPredicted RBP14.89□□□□□ -0.03
SORL1-201ENST00000260197 RTN4Q9NQC3 1192 aaKnown RBP14.89□□□□□ -0.03
SORL1-201ENST00000260197 KCNJ4P48050 445 aa14.89□□□□□ -0.03
SORL1-201ENST00000260197 EIF3AQ14152 1382 aaKnown RBP14.89□□□□□ -0.03
SORL1-201ENST00000260197 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
SORL1-201ENST00000260197 GOLGA6L4A6NEF3 574 aa14.87□□□□□ -0.03
SORL1-201ENST00000260197 CCER2I3L3R5 266 aa14.86□□□□□ -0.03
SORL1-201ENST00000260197 ARID4BQ4LE39 1312 aaPredicted RBP14.85□□□□□ -0.03
SORL1-201ENST00000260197 CC2D1BQ5T0F9 858 aaKnown RBP14.84□□□□□ -0.03
SORL1-201ENST00000260197 CUX2O14529 1486 aa14.84□□□□□ -0.03
SORL1-201ENST00000260197 KCNH8Q96L42 1107 aa14.84□□□□□ -0.03
SORL1-201ENST00000260197 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
SORL1-201ENST00000260197 B4GALNT3Q6L9W6 998 aa14.83□□□□□ -0.03
SORL1-201ENST00000260197 POGKQ9P215 609 aa14.83□□□□□ -0.03
SORL1-201ENST00000260197 NEUROD2Q15784 382 aa14.83□□□□□ -0.03
SORL1-201ENST00000260197 FMN1Q68DA7 1419 aa14.83□□□□□ -0.03
SORL1-201ENST00000260197 DEKP35659 375 aaKnown RBP14.83□□□□□ -0.04
SORL1-201ENST00000260197 TMF1P82094 1093 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms