RNA–Protein interactions for RNA: ENST00000256646.6

NOTCH2-201, Transcript of notch 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH2, Length 11,389 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-201ENST00000256646 PPM1GO15355 546 aaPredicted RBP13.25□□□□□ -0.29
NOTCH2-201ENST00000256646 MRS2Q9HD23 443 aa13.24□□□□□ -0.29
NOTCH2-201ENST00000256646 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
NOTCH2-201ENST00000256646 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
NOTCH2-201ENST00000256646 GLIPR1L2Q4G1C9 344 aa13.22□□□□□ -0.29
NOTCH2-201ENST00000256646 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
NOTCH2-201ENST00000256646 KCNH8Q96L42 1107 aa13.19□□□□□ -0.3
NOTCH2-201ENST00000256646 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
NOTCH2-201ENST00000256646 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
NOTCH2-201ENST00000256646 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
NOTCH2-201ENST00000256646 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
NOTCH2-201ENST00000256646 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
NOTCH2-201ENST00000256646 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
NOTCH2-201ENST00000256646 RRP7BPQ9NSQ0 103 aa13.16□□□□□ -0.3
NOTCH2-201ENST00000256646 ARID4BQ4LE39 1312 aaPredicted RBP13.15□□□□□ -0.3
NOTCH2-201ENST00000256646 NPHP1O15259 732 aa13.15□□□□□ -0.3
NOTCH2-201ENST00000256646 PTMAP06454 111 aaKnown RBP13.15□□□□□ -0.3
NOTCH2-201ENST00000256646 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
NOTCH2-201ENST00000256646 TNNT2P45379 298 aaPredicted RBP13.14□□□□□ -0.31
NOTCH2-201ENST00000256646 MIER1Q8N108 512 aa13.13□□□□□ -0.31
NOTCH2-201ENST00000256646 NAP1L2Q9ULW6 460 aaPredicted RBP13.13□□□□□ -0.31
NOTCH2-201ENST00000256646 DNTTIP2Q5QJE6 756 aaKnown RBP13.13□□□□□ -0.31
NOTCH2-201ENST00000256646 TRIM44Q96DX7 344 aaPredicted RBP13.13□□□□□ -0.31
NOTCH2-201ENST00000256646 PLCB2Q00722 1185 aa13.12□□□□□ -0.31
NOTCH2-201ENST00000256646 CLSTN1O94985 981 aa13.09□□□□□ -0.31
NOTCH2-201ENST00000256646 ZRSR1Q15695 479 aaKnown RBP13.07□□□□□ -0.32
NOTCH2-201ENST00000256646 SOX12O15370 315 aa13.07□□□□□ -0.32
NOTCH2-201ENST00000256646 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
NOTCH2-201ENST00000256646 BECN1Q14457 450 aa13.05□□□□□ -0.32
NOTCH2-201ENST00000256646 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
NOTCH2-201ENST00000256646 NAP1L5Q96NT1 182 aaPredicted RBP13.04□□□□□ -0.32
NOTCH2-201ENST00000256646 TSPY4P0CV99 314 aa13.04□□□□□ -0.32
NOTCH2-201ENST00000256646 TSPY10P0CW01 314 aa13.04□□□□□ -0.32
NOTCH2-201ENST00000256646 RGS3P49796 1198 aa13.03□□□□□ -0.32
NOTCH2-201ENST00000256646 ISY1Q9ULR0 285 aaKnown RBP13.01□□□□□ -0.33
NOTCH2-201ENST00000256646 FRAT1Q92837 279 aaPredicted RBP13.01□□□□□ -0.33
NOTCH2-201ENST00000256646 CHMP7Q8WUX9 453 aaPredicted RBP13.01□□□□□ -0.33
NOTCH2-201ENST00000256646 OS9Q13438 667 aaPredicted RBP13.01□□□□□ -0.33
NOTCH2-201ENST00000256646 SUPT16HQ9Y5B9 1047 aaKnown RBP13□□□□□ -0.33
NOTCH2-201ENST00000256646 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
NOTCH2-201ENST00000256646 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
NOTCH2-201ENST00000256646 DDRGK1Q96HY6 314 aa12.99□□□□□ -0.33
NOTCH2-201ENST00000256646 CASC1Q6TDU7 716 aa12.99□□□□□ -0.33
NOTCH2-201ENST00000256646 MTUS2Q5JR59 1369 aa12.98□□□□□ -0.33
NOTCH2-201ENST00000256646 FGD1P98174 961 aa12.98□□□□□ -0.33
NOTCH2-201ENST00000256646 ARID3AQ99856 593 aa12.97□□□□□ -0.33
NOTCH2-201ENST00000256646 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
NOTCH2-201ENST00000256646 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.34
NOTCH2-201ENST00000256646 HSP90AB1P08238 724 aaKnown RBP12.95□□□□□ -0.34
NOTCH2-201ENST00000256646 KCNJ4P48050 445 aa12.95□□□□□ -0.34
NOTCH2-201ENST00000256646 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
NOTCH2-201ENST00000256646 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
NOTCH2-201ENST00000256646 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
NOTCH2-201ENST00000256646 PDE4CQ08493 712 aa12.93□□□□□ -0.34
NOTCH2-201ENST00000256646 SAFB2Q14151 953 aaKnown RBP eCLIP12.92□□□□□ -0.34
NOTCH2-201ENST00000256646 APBB1O00213 710 aa12.92□□□□□ -0.34
NOTCH2-201ENST00000256646 MLECQ14165 292 aa12.92□□□□□ -0.34
NOTCH2-201ENST00000256646 KNSTRNQ9Y448 316 aa12.92□□□□□ -0.34
NOTCH2-201ENST00000256646 POGKQ9P215 609 aa12.91□□□□□ -0.34
NOTCH2-201ENST00000256646 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
NOTCH2-201ENST00000256646 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
NOTCH2-201ENST00000256646 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
NOTCH2-201ENST00000256646 B4GALNT3Q6L9W6 998 aa12.87□□□□□ -0.35
NOTCH2-201ENST00000256646 ZNF330Q9Y3S2 320 aaPredicted RBP12.86□□□□□ -0.35
NOTCH2-201ENST00000256646 DRC7Q8IY82 874 aa12.86□□□□□ -0.35
NOTCH2-201ENST00000256646 CARD11Q9BXL7 1154 aa12.85□□□□□ -0.35
NOTCH2-201ENST00000256646 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
NOTCH2-201ENST00000256646 PRM3Q9NNZ6 103 aa12.84□□□□□ -0.35
NOTCH2-201ENST00000256646 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
NOTCH2-201ENST00000256646 SIN3AQ96ST3 1273 aa12.81□□□□□ -0.36
NOTCH2-201ENST00000256646 STK26Q9P289 416 aa12.8□□□□□ -0.36
NOTCH2-201ENST00000256646 GOLGA6L4A6NEF3 574 aa12.8□□□□□ -0.36
NOTCH2-201ENST00000256646 GOLGA6L6A8MZA4 724 aa12.79□□□□□ -0.36
NOTCH2-201ENST00000256646 GNL2Q13823 731 aaKnown RBP12.78□□□□□ -0.36
NOTCH2-201ENST00000256646 PLEKHD1A6NEE1 506 aa12.78□□□□□ -0.36
NOTCH2-201ENST00000256646 PAK3O75914 559 aaPredicted RBP12.78□□□□□ -0.36
NOTCH2-201ENST00000256646 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
NOTCH2-201ENST00000256646 GZF1Q9H116 711 aaPredicted RBP12.76□□□□□ -0.37
NOTCH2-201ENST00000256646 SRPK2P78362 688 aaKnown RBP12.76□□□□□ -0.37
NOTCH2-201ENST00000256646 ANP32EQ9BTT0 268 aa12.76□□□□□ -0.37
NOTCH2-201ENST00000256646 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
NOTCH2-201ENST00000256646 CLIP1P30622 1438 aa12.74□□□□□ -0.37
NOTCH2-201ENST00000256646 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
NOTCH2-201ENST00000256646 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
NOTCH2-201ENST00000256646 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
NOTCH2-201ENST00000256646 CREBRFQ8IUR6 639 aa12.73□□□□□ -0.37
NOTCH2-201ENST00000256646 NOC3LQ8WTT2 800 aaKnown RBP12.72□□□□□ -0.37
NOTCH2-201ENST00000256646 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
NOTCH2-201ENST00000256646 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
NOTCH2-201ENST00000256646 CCDC9Q9Y3X0 531 aaKnown RBP12.71□□□□□ -0.37
NOTCH2-201ENST00000256646 NOL8Q76FK4 1167 aaKnown RBP12.71□□□□□ -0.38
NOTCH2-201ENST00000256646 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.38
NOTCH2-201ENST00000256646 FOXD1Q16676 465 aa12.7□□□□□ -0.38
NOTCH2-201ENST00000256646 DCAF11Q8TEB1 546 aa12.7□□□□□ -0.38
NOTCH2-201ENST00000256646 MSNP26038 577 aaKnown RBP12.69□□□□□ -0.38
NOTCH2-201ENST00000256646 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
NOTCH2-201ENST00000256646 HSP90B1P14625 803 aaKnown RBP12.69□□□□□ -0.38
NOTCH2-201ENST00000256646 CDCA8Q53HL2 280 aa12.69□□□□□ -0.38
NOTCH2-201ENST00000256646 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
NOTCH2-201ENST00000256646 CHAF1AQ13111 956 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms