RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
DUSP4-201ENST00000240100 SLC24A1O60721 1099 aa22.98■■□□□ 1.27
DUSP4-201ENST00000240100 KDM2AQ9Y2K7 1162 aa22.98■■□□□ 1.27
DUSP4-201ENST00000240100 BCL11AQ9H165 835 aa22.98■■□□□ 1.27
DUSP4-201ENST00000240100 ANP32BQ92688 251 aaKnown RBP22.96■■□□□ 1.27
DUSP4-201ENST00000240100 IRX6P78412 446 aaPredicted RBP22.95■■□□□ 1.27
DUSP4-201ENST00000240100 SOGA1O94964 1423 aa22.94■■□□□ 1.26
DUSP4-201ENST00000240100 NPM1P06748 294 aaKnown RBP eCLIP22.94■■□□□ 1.26
DUSP4-201ENST00000240100 CCNB3Q8WWL7 1395 aa22.94■■□□□ 1.26
DUSP4-201ENST00000240100 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
DUSP4-201ENST00000240100 FHAD1B1AJZ9 1412 aa22.93■■□□□ 1.26
DUSP4-201ENST00000240100 HSP90AA1P07900 732 aaKnown RBP22.93■■□□□ 1.26
DUSP4-201ENST00000240100 NBR1Q14596 966 aa22.9■■□□□ 1.26
DUSP4-201ENST00000240100 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
DUSP4-201ENST00000240100 MROH2BQ7Z745 1585 aa22.9■■□□□ 1.26
DUSP4-201ENST00000240100 STAG3Q9UJ98 1225 aa22.87■■□□□ 1.25
DUSP4-201ENST00000240100 TIMELESSQ9UNS1 1208 aa22.87■■□□□ 1.25
DUSP4-201ENST00000240100 ESF1Q9H501 851 aaKnown RBP22.85■■□□□ 1.25
DUSP4-201ENST00000240100 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
DUSP4-201ENST00000240100 DDRGK1Q96HY6 314 aa22.85■■□□□ 1.25
DUSP4-201ENST00000240100 PLEKHD1A6NEE1 506 aa22.82■■□□□ 1.24
DUSP4-201ENST00000240100 ANP32EQ9BTT0 268 aa22.81■■□□□ 1.24
DUSP4-201ENST00000240100 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
DUSP4-201ENST00000240100 SIN3AQ96ST3 1273 aa22.79■■□□□ 1.24
DUSP4-201ENST00000240100 SUPT16HQ9Y5B9 1047 aaKnown RBP22.78■■□□□ 1.24
DUSP4-201ENST00000240100 CFDP1Q9UEE9 299 aaPredicted RBP22.76■■□□□ 1.23
DUSP4-201ENST00000240100 PPP4R2Q9NY27 417 aa22.75■■□□□ 1.23
DUSP4-201ENST00000240100 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
DUSP4-201ENST00000240100 SETD5Q9C0A6 1442 aa22.75■■□□□ 1.23
DUSP4-201ENST00000240100 CARMIL1Q5VZK9 1371 aa22.75■■□□□ 1.23
DUSP4-201ENST00000240100 CDCA8Q53HL2 280 aa22.74■■□□□ 1.23
DUSP4-201ENST00000240100 CCER2I3L3R5 266 aa22.73■■□□□ 1.23
DUSP4-201ENST00000240100 CUX2O14529 1486 aa22.73■■□□□ 1.23
DUSP4-201ENST00000240100 EIF5BO60841 1220 aaKnown RBP22.72■■□□□ 1.23
DUSP4-201ENST00000240100 CARD11Q9BXL7 1154 aa22.71■■□□□ 1.23
DUSP4-201ENST00000240100 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
DUSP4-201ENST00000240100 BECN1Q14457 450 aa22.69■■□□□ 1.22
DUSP4-201ENST00000240100 ARHGAP35Q9NRY4 1499 aa22.69■■□□□ 1.22
DUSP4-201ENST00000240100 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
DUSP4-201ENST00000240100 WIZO95785 1651 aa22.65■■□□□ 1.22
DUSP4-201ENST00000240100 MYH16Q9H6N6 1097 aa22.65■■□□□ 1.22
DUSP4-201ENST00000240100 KNSTRNQ9Y448 316 aa22.64■■□□□ 1.21
DUSP4-201ENST00000240100 RGL3Q3MIN7 710 aa22.61■■□□□ 1.21
DUSP4-201ENST00000240100 GLIPR1L2Q4G1C9 344 aa22.6■■□□□ 1.21
DUSP4-201ENST00000240100 CFAP53Q96M91 514 aa22.59■■□□□ 1.21
DUSP4-201ENST00000240100 PPM1GO15355 546 aaPredicted RBP22.57■■□□□ 1.2
DUSP4-201ENST00000240100 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
DUSP4-201ENST00000240100 KCNH8Q96L42 1107 aa22.54■■□□□ 1.2
DUSP4-201ENST00000240100 KANK4Q5T7N3 995 aaPredicted RBP22.54■■□□□ 1.2
DUSP4-201ENST00000240100 RAB3GAP2Q9H2M9 1393 aa22.52■■□□□ 1.2
DUSP4-201ENST00000240100 NOP58Q9Y2X3 529 aaKnown RBP22.5■■□□□ 1.19
DUSP4-201ENST00000240100 ERICH6BQ5W0A0 696 aa22.48■■□□□ 1.19
DUSP4-201ENST00000240100 FMN1Q68DA7 1419 aa22.48■■□□□ 1.19
DUSP4-201ENST00000240100 HSPA5P11021 654 aaKnown RBP22.47■■□□□ 1.19
DUSP4-201ENST00000240100 ARXQ96QS3 562 aa22.45■■□□□ 1.18
DUSP4-201ENST00000240100 GOLGA6L22H0YM25 854 aa22.42■■□□□ 1.18
DUSP4-201ENST00000240100 TMF1P82094 1093 aa22.41■■□□□ 1.18
DUSP4-201ENST00000240100 B4GALNT3Q6L9W6 998 aa22.4■■□□□ 1.18
DUSP4-201ENST00000240100 FTSJ3Q8IY81 847 aaKnown RBP22.4■■□□□ 1.18
DUSP4-201ENST00000240100 SENP3-EIF4A1A0A087X0R7 540 aa22.38■■□□□ 1.17
DUSP4-201ENST00000240100 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
DUSP4-201ENST00000240100 PPP1R15AO75807 674 aaPredicted RBP22.37■■□□□ 1.17
DUSP4-201ENST00000240100 CC2D1BQ5T0F9 858 aaKnown RBP22.36■■□□□ 1.17
DUSP4-201ENST00000240100 DCAF11Q8TEB1 546 aa22.36■■□□□ 1.17
DUSP4-201ENST00000240100 RAPGEF2Q9Y4G8 1499 aa22.36■■□□□ 1.17
DUSP4-201ENST00000240100 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
DUSP4-201ENST00000240100 MS4A1P11836 297 aa22.35■■□□□ 1.17
DUSP4-201ENST00000240100 TRIM44Q96DX7 344 aaPredicted RBP22.35■■□□□ 1.17
DUSP4-201ENST00000240100 MAPK8IP3Q9UPT6 1336 aa22.34■■□□□ 1.17
DUSP4-201ENST00000240100 RBM19Q9Y4C8 960 aaKnown RBP22.34■■□□□ 1.17
DUSP4-201ENST00000240100 NCLP19338 710 aaKnown RBP22.33■■□□□ 1.17
DUSP4-201ENST00000240100 CASC1Q6TDU7 716 aa22.32■■□□□ 1.16
DUSP4-201ENST00000240100 CHMP4BQ9H444 224 aaKnown RBP22.32■■□□□ 1.16
DUSP4-201ENST00000240100 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
DUSP4-201ENST00000240100 KANK1Q14678 1352 aa22.3■■□□□ 1.16
DUSP4-201ENST00000240100 KTN1Q86UP2 1357 aaKnown RBP22.3■■□□□ 1.16
DUSP4-201ENST00000240100 MPHOSPH9Q99550 1183 aa22.29■■□□□ 1.16
DUSP4-201ENST00000240100 LAS1LQ9Y4W2 734 aaKnown RBP22.29■■□□□ 1.16
DUSP4-201ENST00000240100 RGS3P49796 1198 aa22.28■■□□□ 1.16
DUSP4-201ENST00000240100 PLPPR3Q6T4P5 718 aa22.28■■□□□ 1.16
DUSP4-201ENST00000240100 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
DUSP4-201ENST00000240100 PKD2Q13563 968 aa22.26■■□□□ 1.15
DUSP4-201ENST00000240100 PNNQ9H307 717 aaKnown RBP22.26■■□□□ 1.15
DUSP4-201ENST00000240100 RALBP1Q15311 655 aa22.25■■□□□ 1.15
DUSP4-201ENST00000240100 NEUROD2Q15784 382 aa22.25■■□□□ 1.15
DUSP4-201ENST00000240100 CARMIL2Q6F5E8 1435 aa22.24■■□□□ 1.15
DUSP4-201ENST00000240100 FRAT1Q92837 279 aaPredicted RBP22.23■■□□□ 1.15
DUSP4-201ENST00000240100 ANKRD30AQ9BXX3 1397 aa22.22■■□□□ 1.15
DUSP4-201ENST00000240100 ATAD2BQ9ULI0 1458 aa22.21■■□□□ 1.15
DUSP4-201ENST00000240100 FHOD3Q2V2M9 1422 aa22.19■■□□□ 1.14
DUSP4-201ENST00000240100 POGKQ9P215 609 aa22.18■■□□□ 1.14
DUSP4-201ENST00000240100 ROCK2O75116 1388 aaKnown RBP22.18■■□□□ 1.14
DUSP4-201ENST00000240100 RUSC2Q8N2Y8 1516 aa22.17■■□□□ 1.14
DUSP4-201ENST00000240100 TSHZ2Q9NRE2 1034 aa22.17■■□□□ 1.14
DUSP4-201ENST00000240100 FOXD1Q16676 465 aa22.17■■□□□ 1.14
DUSP4-201ENST00000240100 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
DUSP4-201ENST00000240100 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
DUSP4-201ENST00000240100 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.14
DUSP4-201ENST00000240100 RCAN3Q9UKA8 241 aa22.14■■□□□ 1.13
DUSP4-201ENST00000240100 TCERG1O14776 1098 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms