RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 EIF4G2P78344 907 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCDC170-201ENST00000239374 SALL2Q9Y467 1007 aaPredicted RBP14.95□□□□□ -0.02
CCDC170-201ENST00000239374 MTUS2Q5JR59 1369 aa14.95□□□□□ -0.02
CCDC170-201ENST00000239374 DHX57Q6P158 1386 aaKnown RBP14.94□□□□□ -0.02
CCDC170-201ENST00000239374 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
CCDC170-201ENST00000239374 RRP7BPQ9NSQ0 103 aa14.93□□□□□ -0.02
CCDC170-201ENST00000239374 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
CCDC170-201ENST00000239374 SENP3-EIF4A1A0A087X0R7 540 aa14.91□□□□□ -0.02
CCDC170-201ENST00000239374 TMC1Q8TDI8 760 aa14.91□□□□□ -0.02
CCDC170-201ENST00000239374 PPP4R2Q9NY27 417 aa14.91□□□□□ -0.02
CCDC170-201ENST00000239374 RAB3GAP2Q9H2M9 1393 aa14.9□□□□□ -0.02
CCDC170-201ENST00000239374 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
CCDC170-201ENST00000239374 B4GALNT3Q6L9W6 998 aa14.89□□□□□ -0.03
CCDC170-201ENST00000239374 TOP2AP11388 1531 aaKnown RBP14.88□□□□□ -0.03
CCDC170-201ENST00000239374 ZNF777Q9ULD5 760 aaPredicted RBP14.88□□□□□ -0.03
CCDC170-201ENST00000239374 SETD5Q9C0A6 1442 aa14.87□□□□□ -0.03
CCDC170-201ENST00000239374 TIMELESSQ9UNS1 1208 aa14.86□□□□□ -0.03
CCDC170-201ENST00000239374 RAPGEF2Q9Y4G8 1499 aa14.86□□□□□ -0.03
CCDC170-201ENST00000239374 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
CCDC170-201ENST00000239374 EIF5BO60841 1220 aaKnown RBP14.84□□□□□ -0.03
CCDC170-201ENST00000239374 NOP58Q9Y2X3 529 aaKnown RBP14.81□□□□□ -0.04
CCDC170-201ENST00000239374 PPP1R15AO75807 674 aaPredicted RBP14.8□□□□□ -0.04
CCDC170-201ENST00000239374 DEKP35659 375 aaKnown RBP14.79□□□□□ -0.04
CCDC170-201ENST00000239374 CANXP27824 592 aaKnown RBP14.76□□□□□ -0.05
CCDC170-201ENST00000239374 KDM2AQ9Y2K7 1162 aa14.75□□□□□ -0.05
CCDC170-201ENST00000239374 HSPA5P11021 654 aaKnown RBP14.74□□□□□ -0.05
CCDC170-201ENST00000239374 FBLN2P98095 1184 aa14.73□□□□□ -0.05
CCDC170-201ENST00000239374 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
CCDC170-201ENST00000239374 CARMIL1Q5VZK9 1371 aa14.71□□□□□ -0.05
CCDC170-201ENST00000239374 LAS1LQ9Y4W2 734 aaKnown RBP14.7□□□□□ -0.06
CCDC170-201ENST00000239374 RTN4Q9NQC3 1192 aaKnown RBP14.7□□□□□ -0.06
CCDC170-201ENST00000239374 CUX2O14529 1486 aa14.69□□□□□ -0.06
CCDC170-201ENST00000239374 ERICH6BQ5W0A0 696 aa14.69□□□□□ -0.06
CCDC170-201ENST00000239374 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
CCDC170-201ENST00000239374 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
CCDC170-201ENST00000239374 NEFMP07197 916 aa14.66□□□□□ -0.06
CCDC170-201ENST00000239374 ARHGAP35Q9NRY4 1499 aa14.65□□□□□ -0.06
CCDC170-201ENST00000239374 KIF21BO75037 1637 aa14.63□□□□□ -0.07
CCDC170-201ENST00000239374 FOXD1Q16676 465 aa14.62□□□□□ -0.07
CCDC170-201ENST00000239374 DDRGK1Q96HY6 314 aa14.61□□□□□ -0.07
CCDC170-201ENST00000239374 PPM1GO15355 546 aaPredicted RBP14.6□□□□□ -0.07
CCDC170-201ENST00000239374 ARXQ96QS3 562 aa14.6□□□□□ -0.07
CCDC170-201ENST00000239374 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.6□□□□□ -0.07
CCDC170-201ENST00000239374 FANCIQ9NVI1 1328 aa14.59□□□□□ -0.07
CCDC170-201ENST00000239374 CARD11Q9BXL7 1154 aa14.59□□□□□ -0.07
CCDC170-201ENST00000239374 WDR43Q15061 677 aaKnown RBP eCLIP14.59□□□□□ -0.07
CCDC170-201ENST00000239374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.08
CCDC170-201ENST00000239374 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
CCDC170-201ENST00000239374 TSPY4P0CV99 314 aa14.57□□□□□ -0.08
CCDC170-201ENST00000239374 TSPY10P0CW01 314 aa14.57□□□□□ -0.08
CCDC170-201ENST00000239374 L3MBTL2Q969R5 705 aa14.54□□□□□ -0.08
CCDC170-201ENST00000239374 RGL3Q3MIN7 710 aa14.53□□□□□ -0.08
CCDC170-201ENST00000239374 IPO9Q96P70 1041 aaKnown RBP14.53□□□□□ -0.08
CCDC170-201ENST00000239374 MPHOSPH9Q99550 1183 aa14.53□□□□□ -0.08
CCDC170-201ENST00000239374 FHOD3Q2V2M9 1422 aa14.51□□□□□ -0.09
CCDC170-201ENST00000239374 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
CCDC170-201ENST00000239374 CFDP1Q9UEE9 299 aaPredicted RBP14.51□□□□□ -0.09
CCDC170-201ENST00000239374 NUDCQ9Y266 331 aa14.5□□□□□ -0.09
CCDC170-201ENST00000239374 PRKRIP1Q9H875 184 aaPredicted RBP14.5□□□□□ -0.09
CCDC170-201ENST00000239374 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
CCDC170-201ENST00000239374 RRBP1Q9P2E9 1410 aaKnown RBP14.49□□□□□ -0.09
CCDC170-201ENST00000239374 RGS3P49796 1198 aa14.49□□□□□ -0.09
CCDC170-201ENST00000239374 ARAP1Q96P48 1450 aa14.48□□□□□ -0.09
CCDC170-201ENST00000239374 PHLDB1Q86UU1 1377 aa14.47□□□□□ -0.09
CCDC170-201ENST00000239374 SYNJ1O43426 1573 aa14.46□□□□□ -0.09
CCDC170-201ENST00000239374 CC2D1BQ5T0F9 858 aaKnown RBP14.46□□□□□ -0.1
CCDC170-201ENST00000239374 ZBED9Q6R2W3 1325 aa14.45□□□□□ -0.1
CCDC170-201ENST00000239374 HSP90AA1P07900 732 aaKnown RBP14.45□□□□□ -0.1
CCDC170-201ENST00000239374 RCAN3Q9UKA8 241 aa14.45□□□□□ -0.1
CCDC170-201ENST00000239374 TCERG1O14776 1098 aaKnown RBP14.44□□□□□ -0.1
CCDC170-201ENST00000239374 BECN1Q14457 450 aa14.43□□□□□ -0.1
CCDC170-201ENST00000239374 DCAF11Q8TEB1 546 aa14.43□□□□□ -0.1
CCDC170-201ENST00000239374 CCDC18Q5T9S5 1454 aa14.42□□□□□ -0.1
CCDC170-201ENST00000239374 GLIPR1L2Q4G1C9 344 aa14.41□□□□□ -0.1
CCDC170-201ENST00000239374 PKD2Q13563 968 aa14.4□□□□□ -0.1
CCDC170-201ENST00000239374 KNSTRNQ9Y448 316 aa14.4□□□□□ -0.1
CCDC170-201ENST00000239374 WASHC2AQ641Q2 1341 aa14.39□□□□□ -0.11
CCDC170-201ENST00000239374 MSH5O43196 834 aa14.38□□□□□ -0.11
CCDC170-201ENST00000239374 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.38□□□□□ -0.11
CCDC170-201ENST00000239374 ANP32BQ92688 251 aaKnown RBP14.38□□□□□ -0.11
CCDC170-201ENST00000239374 PLEKHD1A6NEE1 506 aa14.38□□□□□ -0.11
CCDC170-201ENST00000239374 IGF1RP08069 1367 aa14.38□□□□□ -0.11
CCDC170-201ENST00000239374 WDR97A6NE52 1622 aa14.38□□□□□ -0.11
CCDC170-201ENST00000239374 LRRC9Q6ZRR7 1453 aa14.37□□□□□ -0.11
CCDC170-201ENST00000239374 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
CCDC170-201ENST00000239374 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
CCDC170-201ENST00000239374 CHMP7Q8WUX9 453 aaPredicted RBP14.35□□□□□ -0.11
CCDC170-201ENST00000239374 PRXQ9BXM0 1461 aa14.34□□□□□ -0.11
CCDC170-201ENST00000239374 ERICH3Q5RHP9 1530 aa14.34□□□□□ -0.11
CCDC170-201ENST00000239374 PDE4AP27815 886 aa14.34□□□□□ -0.11
CCDC170-201ENST00000239374 RALBP1Q15311 655 aa14.34□□□□□ -0.11
CCDC170-201ENST00000239374 EXOC6Q8TAG9 804 aa14.34□□□□□ -0.11
CCDC170-201ENST00000239374 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.11
CCDC170-201ENST00000239374 UACAQ9BZF9 1416 aa14.33□□□□□ -0.12
CCDC170-201ENST00000239374 NEUROD2Q15784 382 aa14.32□□□□□ -0.12
CCDC170-201ENST00000239374 KTN1Q86UP2 1357 aaKnown RBP14.32□□□□□ -0.12
CCDC170-201ENST00000239374 CCDC7Q96M83 1385 aa14.32□□□□□ -0.12
CCDC170-201ENST00000239374 FGD6Q6ZV73 1430 aa14.31□□□□□ -0.12
CCDC170-201ENST00000239374 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
CCDC170-201ENST00000239374 CCDC184Q52MB2 194 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms