RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 KIF27Q86VH2 1401 aa25.22■■□□□ 1.63
PKD2-201ENST00000237596 CFDP1Q9UEE9 299 aaPredicted RBP25.21■■□□□ 1.63
PKD2-201ENST00000237596 EIF4G2P78344 907 aaKnown RBP eCLIP25.2■■□□□ 1.62
PKD2-201ENST00000237596 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
PKD2-201ENST00000237596 HIRIP3Q9BW71 556 aaPredicted RBP25.18■■□□□ 1.62
PKD2-201ENST00000237596 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
PKD2-201ENST00000237596 RGL3Q3MIN7 710 aa25.16■■□□□ 1.62
PKD2-201ENST00000237596 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.16■■□□□ 1.62
PKD2-201ENST00000237596 HSP90AA1P07900 732 aaKnown RBP25.15■■□□□ 1.62
PKD2-201ENST00000237596 UPF2Q9HAU5 1272 aaKnown RBP25.14■■□□□ 1.62
PKD2-201ENST00000237596 ARID4BQ4LE39 1312 aaPredicted RBP25.11■■□□□ 1.61
PKD2-201ENST00000237596 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
PKD2-201ENST00000237596 C14orf37Q86TY3 774 aa25.08■■□□□ 1.61
PKD2-201ENST00000237596 CCDC136Q96JN2 1154 aa25.07■■□□□ 1.6
PKD2-201ENST00000237596 PLEKHG5O94827 1062 aa25.06■■□□□ 1.6
PKD2-201ENST00000237596 A0A0G2JS52 829 aa25.04■■□□□ 1.6
PKD2-201ENST00000237596 MIER1Q8N108 512 aa25.02■■□□□ 1.6
PKD2-201ENST00000237596 ZBTB7CA1YPR0 619 aa25.02■■□□□ 1.6
PKD2-201ENST00000237596 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
PKD2-201ENST00000237596 TNIKQ9UKE5 1360 aa25.01■■□□□ 1.59
PKD2-201ENST00000237596 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
PKD2-201ENST00000237596 CDCA8Q53HL2 280 aa24.93■■□□□ 1.58
PKD2-201ENST00000237596 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.58
PKD2-201ENST00000237596 CARD11Q9BXL7 1154 aa24.89■■□□□ 1.57
PKD2-201ENST00000237596 ANP32BQ92688 251 aaKnown RBP24.88■■□□□ 1.57
PKD2-201ENST00000237596 MYH16Q9H6N6 1097 aa24.88■■□□□ 1.57
PKD2-201ENST00000237596 CFAP53Q96M91 514 aa24.87■■□□□ 1.57
PKD2-201ENST00000237596 KNSTRNQ9Y448 316 aa24.87■■□□□ 1.57
PKD2-201ENST00000237596 HAP1P54257 671 aaPredicted RBP24.85■■□□□ 1.57
PKD2-201ENST00000237596 CARMIL1Q5VZK9 1371 aa24.84■■□□□ 1.57
PKD2-201ENST00000237596 CCNB3Q8WWL7 1395 aa24.81■■□□□ 1.56
PKD2-201ENST00000237596 PPM1GO15355 546 aaPredicted RBP24.81■■□□□ 1.56
PKD2-201ENST00000237596 IRX6P78412 446 aaPredicted RBP24.81■■□□□ 1.56
PKD2-201ENST00000237596 CUX2O14529 1486 aa24.8■■□□□ 1.56
PKD2-201ENST00000237596 POGKQ9P215 609 aa24.78■■□□□ 1.56
PKD2-201ENST00000237596 FHAD1B1AJZ9 1412 aa24.78■■□□□ 1.56
PKD2-201ENST00000237596 SIN3AQ96ST3 1273 aa24.73■■□□□ 1.55
PKD2-201ENST00000237596 LMOD2Q6P5Q4 547 aa24.7■■□□□ 1.54
PKD2-201ENST00000237596 EIF4G1Q04637 1599 aaKnown RBP24.7■■□□□ 1.54
PKD2-201ENST00000237596 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
PKD2-201ENST00000237596 SENP3-EIF4A1A0A087X0R7 540 aa24.69■■□□□ 1.54
PKD2-201ENST00000237596 SOGA1O94964 1423 aa24.65■■□□□ 1.54
PKD2-201ENST00000237596 NUDCQ9Y266 331 aa24.65■■□□□ 1.54
PKD2-201ENST00000237596 NEUROD2Q15784 382 aa24.64■■□□□ 1.54
PKD2-201ENST00000237596 MLECQ14165 292 aa24.64■■□□□ 1.53
PKD2-201ENST00000237596 ARXQ96QS3 562 aa24.63■■□□□ 1.53
PKD2-201ENST00000237596 MAPK8IP3Q9UPT6 1336 aa24.62■■□□□ 1.53
PKD2-201ENST00000237596 KANK1Q14678 1352 aa24.61■■□□□ 1.53
PKD2-201ENST00000237596 DCAF11Q8TEB1 546 aa24.6■■□□□ 1.53
PKD2-201ENST00000237596 PDS5BQ9NTI5 1447 aa24.58■■□□□ 1.53
PKD2-201ENST00000237596 TNNT2P45379 298 aaPredicted RBP24.58■■□□□ 1.52
PKD2-201ENST00000237596 HDGFP51858 240 aaKnown RBP24.56■■□□□ 1.52
PKD2-201ENST00000237596 LAS1LQ9Y4W2 734 aaKnown RBP24.55■■□□□ 1.52
PKD2-201ENST00000237596 GGT6Q6P531 493 aa24.54■■□□□ 1.52
PKD2-201ENST00000237596 FTSJ3Q8IY81 847 aaKnown RBP24.53■■□□□ 1.52
PKD2-201ENST00000237596 TDRD9Q8NDG6 1382 aaKnown RBP24.53■■□□□ 1.52
PKD2-201ENST00000237596 CARMIL2Q6F5E8 1435 aa24.53■■□□□ 1.52
PKD2-201ENST00000237596 TMF1P82094 1093 aa24.52■■□□□ 1.52
PKD2-201ENST00000237596 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
PKD2-201ENST00000237596 CC2D1BQ5T0F9 858 aaKnown RBP24.5■■□□□ 1.51
PKD2-201ENST00000237596 NBR1Q14596 966 aa24.5■■□□□ 1.51
PKD2-201ENST00000237596 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
PKD2-201ENST00000237596 U2SURPO15042 1029 aaKnown RBP24.49■■□□□ 1.51
PKD2-201ENST00000237596 ANP32EQ9BTT0 268 aa24.47■■□□□ 1.51
PKD2-201ENST00000237596 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
PKD2-201ENST00000237596 SUPT16HQ9Y5B9 1047 aaKnown RBP24.45■■□□□ 1.5
PKD2-201ENST00000237596 SRPK2P78362 688 aaKnown RBP24.44■■□□□ 1.5
PKD2-201ENST00000237596 TIMELESSQ9UNS1 1208 aa24.44■■□□□ 1.5
PKD2-201ENST00000237596 BECN1Q14457 450 aa24.44■■□□□ 1.5
PKD2-201ENST00000237596 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
PKD2-201ENST00000237596 PKD2Q13563 968 aa24.42■■□□□ 1.5
PKD2-201ENST00000237596 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
PKD2-201ENST00000237596 SAFB2Q14151 953 aaKnown RBP eCLIP24.41■■□□□ 1.5
PKD2-201ENST00000237596 EIF5BO60841 1220 aaKnown RBP24.4■■□□□ 1.5
PKD2-201ENST00000237596 FRAT1Q92837 279 aaPredicted RBP24.4■■□□□ 1.5
PKD2-201ENST00000237596 ARHGAP35Q9NRY4 1499 aa24.39■■□□□ 1.5
PKD2-201ENST00000237596 KANK4Q5T7N3 995 aaPredicted RBP24.38■■□□□ 1.49
PKD2-201ENST00000237596 PNNQ9H307 717 aaKnown RBP24.38■■□□□ 1.49
PKD2-201ENST00000237596 SOX12O15370 315 aa24.38■■□□□ 1.49
PKD2-201ENST00000237596 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
PKD2-201ENST00000237596 DDRGK1Q96HY6 314 aa24.36■■□□□ 1.49
PKD2-201ENST00000237596 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
PKD2-201ENST00000237596 CASC1Q6TDU7 716 aa24.34■■□□□ 1.49
PKD2-201ENST00000237596 FMN1Q68DA7 1419 aa24.34■■□□□ 1.49
PKD2-201ENST00000237596 STK26Q9P289 416 aa24.33■■□□□ 1.49
PKD2-201ENST00000237596 NCLP19338 710 aaKnown RBP24.33■■□□□ 1.48
PKD2-201ENST00000237596 MORC1Q86VD1 984 aa24.32■■□□□ 1.48
PKD2-201ENST00000237596 CHMP4BQ9H444 224 aaKnown RBP24.32■■□□□ 1.48
PKD2-201ENST00000237596 NPHP1O15259 732 aa24.31■■□□□ 1.48
PKD2-201ENST00000237596 FOXD1Q16676 465 aa24.31■■□□□ 1.48
PKD2-201ENST00000237596 MS4A1P11836 297 aa24.29■■□□□ 1.48
PKD2-201ENST00000237596 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
PKD2-201ENST00000237596 GOLGA6L22H0YM25 854 aa24.28■■□□□ 1.48
PKD2-201ENST00000237596 NUP155O75694 1391 aa24.28■■□□□ 1.48
PKD2-201ENST00000237596 RGS3P49796 1198 aa24.26■■□□□ 1.47
PKD2-201ENST00000237596 HSPA5P11021 654 aaKnown RBP24.25■■□□□ 1.47
PKD2-201ENST00000237596 CDK11BP21127 795 aaKnown RBP24.25■■□□□ 1.47
PKD2-201ENST00000237596 ANKRD30AQ9BXX3 1397 aa24.24■■□□□ 1.47
PKD2-201ENST00000237596 OS9Q13438 667 aaPredicted RBP24.24■■□□□ 1.47
PKD2-201ENST00000237596 KIF3BO15066 747 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms