RNA–Protein interactions for RNA: ENST00000232165.7

UBE3A-201, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-201ENST00000232165 WDR43Q15061 677 aaKnown RBP eCLIP23.78■■□□□ 1.41e-6■□□□□ 10.7
UBE3A-201ENST00000232165 BCL11AQ9H165 835 aa23.76■■□□□ 1.39
UBE3A-201ENST00000232165 MIER1Q8N108 512 aa23.76■■□□□ 1.39
UBE3A-201ENST00000232165 NPM2Q86SE8 214 aaKnown RBP23.72■■□□□ 1.39
UBE3A-201ENST00000232165 UPF2Q9HAU5 1272 aaKnown RBP23.71■■□□□ 1.39
UBE3A-201ENST00000232165 CFDP1Q9UEE9 299 aaPredicted RBP23.7■■□□□ 1.39
UBE3A-201ENST00000232165 FHAD1B1AJZ9 1412 aa23.69■■□□□ 1.38
UBE3A-201ENST00000232165 CCDC136Q96JN2 1154 aa23.69■■□□□ 1.38
UBE3A-201ENST00000232165 SALL2Q9Y467 1007 aaPredicted RBP23.66■■□□□ 1.38
UBE3A-201ENST00000232165 KCNH8Q96L42 1107 aa23.64■■□□□ 1.38
UBE3A-201ENST00000232165 HIRIP3Q9BW71 556 aaPredicted RBP23.61■■□□□ 1.37
UBE3A-201ENST00000232165 CARMIL1Q5VZK9 1371 aa23.61■■□□□ 1.37
UBE3A-201ENST00000232165 CDCA8Q53HL2 280 aa23.58■■□□□ 1.36
UBE3A-201ENST00000232165 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.36
UBE3A-201ENST00000232165 CUX2O14529 1486 aa23.57■■□□□ 1.36
UBE3A-201ENST00000232165 SOGA1O94964 1423 aa23.56■■□□□ 1.36
UBE3A-201ENST00000232165 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
UBE3A-201ENST00000232165 HSP90AA1P07900 732 aaKnown RBP23.55■■□□□ 1.36
UBE3A-201ENST00000232165 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
UBE3A-201ENST00000232165 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
UBE3A-201ENST00000232165 ERCC6Q03468 1493 aa23.54■■□□□ 1.36
UBE3A-201ENST00000232165 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
UBE3A-201ENST00000232165 TIMELESSQ9UNS1 1208 aa23.49■■□□□ 1.35
UBE3A-201ENST00000232165 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
UBE3A-201ENST00000232165 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
UBE3A-201ENST00000232165 ANP32BQ92688 251 aaKnown RBP23.46■■□□□ 1.35
UBE3A-201ENST00000232165 CARD11Q9BXL7 1154 aa23.45■■□□□ 1.34
UBE3A-201ENST00000232165 PPP1R15AO75807 674 aaPredicted RBP23.45■■□□□ 1.34
UBE3A-201ENST00000232165 SCAF1Q9H7N4 1312 aaKnown RBP23.44■■□□□ 1.34
UBE3A-201ENST00000232165 CFAP53Q96M91 514 aa23.41■■□□□ 1.34
UBE3A-201ENST00000232165 KNSTRNQ9Y448 316 aa23.41■■□□□ 1.34
UBE3A-201ENST00000232165 SIN3AQ96ST3 1273 aa23.38■■□□□ 1.33
UBE3A-201ENST00000232165 MYH16Q9H6N6 1097 aa23.38■■□□□ 1.33
UBE3A-201ENST00000232165 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
UBE3A-201ENST00000232165 EIF4G1Q04637 1599 aaKnown RBP23.37■■□□□ 1.33
UBE3A-201ENST00000232165 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
UBE3A-201ENST00000232165 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
UBE3A-201ENST00000232165 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
UBE3A-201ENST00000232165 ARHGAP35Q9NRY4 1499 aa23.32■■□□□ 1.32
UBE3A-201ENST00000232165 EIF5BO60841 1220 aaKnown RBP23.32■■□□□ 1.32
UBE3A-201ENST00000232165 SETD5Q9C0A6 1442 aa23.31■■□□□ 1.32
UBE3A-201ENST00000232165 FMN1Q68DA7 1419 aa23.26■■□□□ 1.31
UBE3A-201ENST00000232165 CARMIL2Q6F5E8 1435 aa23.23■■□□□ 1.31
UBE3A-201ENST00000232165 DDRGK1Q96HY6 314 aa23.23■■□□□ 1.31
UBE3A-201ENST00000232165 GLIPR1L2Q4G1C9 344 aa23.22■■□□□ 1.31
UBE3A-201ENST00000232165 KANK1Q14678 1352 aa23.22■■□□□ 1.31
UBE3A-201ENST00000232165 WIZO95785 1651 aa23.19■■□□□ 1.3
UBE3A-201ENST00000232165 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
UBE3A-201ENST00000232165 BECN1Q14457 450 aa23.17■■□□□ 1.3
UBE3A-201ENST00000232165 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
UBE3A-201ENST00000232165 ARID4BQ4LE39 1312 aaPredicted RBP23.17■■□□□ 1.3
UBE3A-201ENST00000232165 TMF1P82094 1093 aa23.17■■□□□ 1.3
UBE3A-201ENST00000232165 KANK4Q5T7N3 995 aaPredicted RBP23.17■■□□□ 1.3
UBE3A-201ENST00000232165 CCER2I3L3R5 266 aa23.15■■□□□ 1.3
UBE3A-201ENST00000232165 C14orf37Q86TY3 774 aa23.15■■□□□ 1.3
UBE3A-201ENST00000232165 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
UBE3A-201ENST00000232165 DCAF11Q8TEB1 546 aa23.14■■□□□ 1.29
UBE3A-201ENST00000232165 POGKQ9P215 609 aa23.14■■□□□ 1.29
UBE3A-201ENST00000232165 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
UBE3A-201ENST00000232165 NBR1Q14596 966 aa23.12■■□□□ 1.29
UBE3A-201ENST00000232165 PPP4R2Q9NY27 417 aa23.12■■□□□ 1.29
UBE3A-201ENST00000232165 SENP3Q9H4L4 574 aaPredicted RBP23.11■■□□□ 1.29
UBE3A-201ENST00000232165 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
UBE3A-201ENST00000232165 RAPGEF2Q9Y4G8 1499 aa23.1■■□□□ 1.29
UBE3A-201ENST00000232165 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
UBE3A-201ENST00000232165 FTSJ3Q8IY81 847 aaKnown RBP23.07■■□□□ 1.28
UBE3A-201ENST00000232165 ZBTB7CA1YPR0 619 aa23.06■■□□□ 1.28
UBE3A-201ENST00000232165 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
UBE3A-201ENST00000232165 PNNQ9H307 717 aaKnown RBP23.05■■□□□ 1.28
UBE3A-201ENST00000232165 PPM1GO15355 546 aaPredicted RBP23.05■■□□□ 1.28
UBE3A-201ENST00000232165 PKD2Q13563 968 aa23.04■■□□□ 1.28
UBE3A-201ENST00000232165 CHMP4BQ9H444 224 aaKnown RBP23.04■■□□□ 1.28
UBE3A-201ENST00000232165 ANP32EQ9BTT0 268 aa23.04■■□□□ 1.28
UBE3A-201ENST00000232165 MS4A1P11836 297 aa23.04■■□□□ 1.28
UBE3A-201ENST00000232165 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
UBE3A-201ENST00000232165 HSPA5P11021 654 aaKnown RBP23.02■■□□□ 1.28
UBE3A-201ENST00000232165 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
UBE3A-201ENST00000232165 ANKRD30AQ9BXX3 1397 aa23.02■■□□□ 1.28
UBE3A-201ENST00000232165 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
UBE3A-201ENST00000232165 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
UBE3A-201ENST00000232165 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
UBE3A-201ENST00000232165 EFCAB2Q5VUJ9 269 aa22.98■■□□□ 1.27
UBE3A-201ENST00000232165 CASC1Q6TDU7 716 aa22.96■■□□□ 1.27
UBE3A-201ENST00000232165 GOLGA6L22H0YM25 854 aa22.95■■□□□ 1.26
UBE3A-201ENST00000232165 SENP3-EIF4A1A0A087X0R7 540 aa22.94■■□□□ 1.26
UBE3A-201ENST00000232165 NUP155O75694 1391 aa22.93■■□□□ 1.26
UBE3A-201ENST00000232165 RSPH4AQ5TD94 716 aa22.92■■□□□ 1.26
UBE3A-201ENST00000232165 CCDC18Q5T9S5 1454 aa22.91■■□□□ 1.26
UBE3A-201ENST00000232165 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
UBE3A-201ENST00000232165 NCLP19338 710 aaKnown RBP22.91■■□□□ 1.26
UBE3A-201ENST00000232165 KTN1Q86UP2 1357 aaKnown RBP22.9■■□□□ 1.26
UBE3A-201ENST00000232165 U2SURPO15042 1029 aaKnown RBP22.9■■□□□ 1.26
UBE3A-201ENST00000232165 TNNT2P45379 298 aaPredicted RBP22.9■■□□□ 1.26
UBE3A-201ENST00000232165 LAS1LQ9Y4W2 734 aaKnown RBP22.9■■□□□ 1.26
UBE3A-201ENST00000232165 HAP1P54257 671 aaPredicted RBP22.89■■□□□ 1.26
UBE3A-201ENST00000232165 PLEKHG5O94827 1062 aa22.89■■□□□ 1.25
UBE3A-201ENST00000232165 A0A0G2JS52 829 aa22.88■■□□□ 1.25
UBE3A-201ENST00000232165 FRAT1Q92837 279 aaPredicted RBP22.88■■□□□ 1.25
UBE3A-201ENST00000232165 MORC1Q86VD1 984 aa22.87■■□□□ 1.25
UBE3A-201ENST00000232165 RALBP1Q15311 655 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms