RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
TRIM23-201ENST00000231524 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
TRIM23-201ENST00000231524 CCER2I3L3R5 266 aa13.29□□□□□ -0.28
TRIM23-201ENST00000231524 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
TRIM23-201ENST00000231524 DHX57Q6P158 1386 aaKnown RBP13.29□□□□□ -0.28
TRIM23-201ENST00000231524 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
TRIM23-201ENST00000231524 KANK4Q5T7N3 995 aaPredicted RBP13.28□□□□□ -0.28
TRIM23-201ENST00000231524 CEP164Q9UPV0 1460 aa13.27□□□□□ -0.29
TRIM23-201ENST00000231524 SENP3-EIF4A1A0A087X0R7 540 aa13.27□□□□□ -0.29
TRIM23-201ENST00000231524 VPS8Q8N3P4 1428 aa13.27□□□□□ -0.29
TRIM23-201ENST00000231524 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
TRIM23-201ENST00000231524 ZNF326Q5BKZ1 582 aaKnown RBP13.25□□□□□ -0.29
TRIM23-201ENST00000231524 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
TRIM23-201ENST00000231524 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
TRIM23-201ENST00000231524 PRKCSHP14314 528 aaPredicted RBP13.21□□□□□ -0.29
TRIM23-201ENST00000231524 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.3
TRIM23-201ENST00000231524 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.3
TRIM23-201ENST00000231524 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.2□□□□□ -0.3
TRIM23-201ENST00000231524 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
TRIM23-201ENST00000231524 MSH5O43196 834 aa13.2□□□□□ -0.3
TRIM23-201ENST00000231524 NEFMP07197 916 aa13.19□□□□□ -0.3
TRIM23-201ENST00000231524 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIM23-201ENST00000231524 RAB3GAP2Q9H2M9 1393 aa13.15□□□□□ -0.3
TRIM23-201ENST00000231524 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
TRIM23-201ENST00000231524 ERICH6BQ5W0A0 696 aa13.12□□□□□ -0.31
TRIM23-201ENST00000231524 BICRAQ9NZM4 1560 aa13.12□□□□□ -0.31
TRIM23-201ENST00000231524 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
TRIM23-201ENST00000231524 TMC1Q8TDI8 760 aa13.11□□□□□ -0.31
TRIM23-201ENST00000231524 CHIC2Q9UKJ5 165 aa13.11□□□□□ -0.31
TRIM23-201ENST00000231524 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
TRIM23-201ENST00000231524 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
TRIM23-201ENST00000231524 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
TRIM23-201ENST00000231524 EIF4G1Q04637 1599 aaKnown RBP13.08□□□□□ -0.32
TRIM23-201ENST00000231524 PPM1GO15355 546 aaPredicted RBP13.08□□□□□ -0.32
TRIM23-201ENST00000231524 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
TRIM23-201ENST00000231524 ARXQ96QS3 562 aa13.07□□□□□ -0.32
TRIM23-201ENST00000231524 CUX2O14529 1486 aa13.06□□□□□ -0.32
TRIM23-201ENST00000231524 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
TRIM23-201ENST00000231524 GLIPR1L2Q4G1C9 344 aa13.04□□□□□ -0.32
TRIM23-201ENST00000231524 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
TRIM23-201ENST00000231524 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
TRIM23-201ENST00000231524 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
TRIM23-201ENST00000231524 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.32
TRIM23-201ENST00000231524 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.33
TRIM23-201ENST00000231524 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.33
TRIM23-201ENST00000231524 DDRGK1Q96HY6 314 aa13□□□□□ -0.33
TRIM23-201ENST00000231524 IL27Q8NEV9 243 aa13□□□□□ -0.33
TRIM23-201ENST00000231524 ERCC6Q03468 1493 aa13□□□□□ -0.33
TRIM23-201ENST00000231524 NCAPD3P42695 1498 aa12.99□□□□□ -0.33
TRIM23-201ENST00000231524 TDRD9Q8NDG6 1382 aaKnown RBP12.98□□□□□ -0.33
TRIM23-201ENST00000231524 CARMIL1Q5VZK9 1371 aa12.97□□□□□ -0.33
TRIM23-201ENST00000231524 ZNF777Q9ULD5 760 aaPredicted RBP12.97□□□□□ -0.33
TRIM23-201ENST00000231524 MTUS2Q5JR59 1369 aa12.95□□□□□ -0.34
TRIM23-201ENST00000231524 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
TRIM23-201ENST00000231524 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
TRIM23-201ENST00000231524 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
TRIM23-201ENST00000231524 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
TRIM23-201ENST00000231524 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
TRIM23-201ENST00000231524 CC2D2AQ9P2K1 1620 aa12.89□□□□□ -0.35
TRIM23-201ENST00000231524 TCERG1O14776 1098 aaKnown RBP12.88□□□□□ -0.35
TRIM23-201ENST00000231524 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
TRIM23-201ENST00000231524 USP35Q9P2H5 1018 aa12.87□□□□□ -0.35
TRIM23-201ENST00000231524 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
TRIM23-201ENST00000231524 SLC4A1APQ9BWU0 796 aaKnown RBP12.87□□□□□ -0.35
TRIM23-201ENST00000231524 KIF21BO75037 1637 aa12.87□□□□□ -0.35
TRIM23-201ENST00000231524 KDM2AQ9Y2K7 1162 aa12.86□□□□□ -0.35
TRIM23-201ENST00000231524 NESP48681 1621 aa12.86□□□□□ -0.35
TRIM23-201ENST00000231524 RGS3P49796 1198 aa12.86□□□□□ -0.35
TRIM23-201ENST00000231524 NAP1L5Q96NT1 182 aaPredicted RBP12.86□□□□□ -0.35
TRIM23-201ENST00000231524 PDE4AP27815 886 aa12.85□□□□□ -0.35
TRIM23-201ENST00000231524 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
TRIM23-201ENST00000231524 FOXD1Q16676 465 aa12.85□□□□□ -0.35
TRIM23-201ENST00000231524 GSE1Q14687 1217 aa12.84□□□□□ -0.35
TRIM23-201ENST00000231524 SYNJ1O43426 1573 aa12.83□□□□□ -0.36
TRIM23-201ENST00000231524 UPF2Q9HAU5 1272 aaKnown RBP12.83□□□□□ -0.36
TRIM23-201ENST00000231524 CCDC184Q52MB2 194 aa12.83□□□□□ -0.36
TRIM23-201ENST00000231524 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
TRIM23-201ENST00000231524 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
TRIM23-201ENST00000231524 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
TRIM23-201ENST00000231524 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
TRIM23-201ENST00000231524 L3MBTL2Q969R5 705 aa12.81□□□□□ -0.36
TRIM23-201ENST00000231524 FGD5Q6ZNL6 1462 aa12.81□□□□□ -0.36
TRIM23-201ENST00000231524 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
TRIM23-201ENST00000231524 EXOC6Q8TAG9 804 aa12.8□□□□□ -0.36
TRIM23-201ENST00000231524 CFTRP13569 1480 aa12.8□□□□□ -0.36
TRIM23-201ENST00000231524 RRBP1Q9P2E9 1410 aaKnown RBP12.8□□□□□ -0.36
TRIM23-201ENST00000231524 WASHC2AQ641Q2 1341 aa12.79□□□□□ -0.36
TRIM23-201ENST00000231524 BECN1Q14457 450 aa12.79□□□□□ -0.36
TRIM23-201ENST00000231524 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
TRIM23-201ENST00000231524 ARHGAP35Q9NRY4 1499 aa12.76□□□□□ -0.37
TRIM23-201ENST00000231524 FHAD1B1AJZ9 1412 aa12.76□□□□□ -0.37
TRIM23-201ENST00000231524 CARD11Q9BXL7 1154 aa12.75□□□□□ -0.37
TRIM23-201ENST00000231524 WDR43Q15061 677 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRIM23-201ENST00000231524 IGF1RP08069 1367 aa12.75□□□□□ -0.37
TRIM23-201ENST00000231524 RSPH6AQ9H0K4 717 aa12.74□□□□□ -0.37
TRIM23-201ENST00000231524 PHLDB1Q86UU1 1377 aa12.73□□□□□ -0.37
TRIM23-201ENST00000231524 ANP32BQ92688 251 aaKnown RBP12.73□□□□□ -0.37
TRIM23-201ENST00000231524 MPHOSPH9Q99550 1183 aa12.73□□□□□ -0.37
TRIM23-201ENST00000231524 ARAP1Q96P48 1450 aa12.73□□□□□ -0.37
TRIM23-201ENST00000231524 ARID4BQ4LE39 1312 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms