RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 WIZO95785 1651 aa10.3□□□□□ -0.76
AFP-201ENST00000226359 LAMC3Q9Y6N6 1575 aa10.3□□□□□ -0.76
AFP-201ENST00000226359 CUX2O14529 1486 aa10.29□□□□□ -0.76
AFP-201ENST00000226359 PDS5BQ9NTI5 1447 aa10.29□□□□□ -0.76
AFP-201ENST00000226359 CLCN6P51797 869 aa10.29□□□□□ -0.76
AFP-201ENST00000226359 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
AFP-201ENST00000226359 NESP48681 1621 aa10.27□□□□□ -0.77
AFP-201ENST00000226359 FBLN2P98095 1184 aa10.26□□□□□ -0.77
AFP-201ENST00000226359 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
AFP-201ENST00000226359 POTEMA6NI47 508 aa10.23□□□□□ -0.77
AFP-201ENST00000226359 SPDYE4A6NLX3 237 aa10.23□□□□□ -0.77
AFP-201ENST00000226359 SPDYE1Q8NFV5 336 aaPredicted RBP10.23□□□□□ -0.77
AFP-201ENST00000226359 POTEIP0CG38 1075 aa10.21□□□□□ -0.78
AFP-201ENST00000226359 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
AFP-201ENST00000226359 MRC2Q9UBG0 1479 aa10.16□□□□□ -0.78
AFP-201ENST00000226359 CEP164Q9UPV0 1460 aa10.16□□□□□ -0.78
AFP-201ENST00000226359 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
AFP-201ENST00000226359 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
AFP-201ENST00000226359 SPDYE2Q495Y8 402 aa10.16□□□□□ -0.78
AFP-201ENST00000226359 CFTRP13569 1480 aa10.15□□□□□ -0.78
AFP-201ENST00000226359 THOC2Q8NI27 1593 aaKnown RBP10.15□□□□□ -0.78
AFP-201ENST00000226359 CLEC11AQ9Y240 323 aa10.15□□□□□ -0.79
AFP-201ENST00000226359 FANCD2Q9BXW9 1451 aa10.14□□□□□ -0.79
AFP-201ENST00000226359 KIF21AQ7Z4S6 1674 aa10.13□□□□□ -0.79
AFP-201ENST00000226359 DCBLD2Q96PD2 775 aa10.12□□□□□ -0.79
AFP-201ENST00000226359 CCDC88BA6NC98 1476 aa10.11□□□□□ -0.79
AFP-201ENST00000226359 WDR62O43379 1518 aa10.09□□□□□ -0.79
AFP-201ENST00000226359 PROM2Q8N271 834 aa10.09□□□□□ -0.79
AFP-201ENST00000226359 OTUD5Q96G74 571 aa10.05□□□□□ -0.8
AFP-201ENST00000226359 SUPT5HO00267 1087 aaKnown RBP10.03□□□□□ -0.8
AFP-201ENST00000226359 PRDM2Q13029 1718 aa10.03□□□□□ -0.8
AFP-201ENST00000226359 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
AFP-201ENST00000226359 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
AFP-201ENST00000226359 ABCC8Q09428 1581 aa10.01□□□□□ -0.81
AFP-201ENST00000226359 URB2Q14146 1524 aaKnown RBP10□□□□□ -0.81
AFP-201ENST00000226359 FBXO3Q9UK99 471 aa9.99□□□□□ -0.81
AFP-201ENST00000226359 ZNF692Q9BU19 519 aaPredicted RBP9.98□□□□□ -0.81
AFP-201ENST00000226359 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
AFP-201ENST00000226359 IFT140Q96RY7 1462 aa9.96□□□□□ -0.82
AFP-201ENST00000226359 DNMBPQ6XZF7 1577 aa9.95□□□□□ -0.82
AFP-201ENST00000226359 TOPBP1Q92547 1522 aa9.95□□□□□ -0.82
AFP-201ENST00000226359 SSUH2Q9Y2M2 353 aa9.93□□□□□ -0.82
AFP-201ENST00000226359 VASPP50552 380 aaPredicted RBP9.92□□□□□ -0.82
AFP-201ENST00000226359 PRR29P0C7W0 189 aa9.9□□□□□ -0.82
AFP-201ENST00000226359 PLCB2Q00722 1185 aa9.9□□□□□ -0.83
AFP-201ENST00000226359 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
AFP-201ENST00000226359 ZNF579Q8NAF0 562 aaKnown RBP9.86□□□□□ -0.83
AFP-201ENST00000226359 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
AFP-201ENST00000226359 SOGA1O94964 1423 aa9.84□□□□□ -0.83
AFP-201ENST00000226359 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
AFP-201ENST00000226359 FARP1Q9Y4F1 1045 aaPredicted RBP9.84□□□□□ -0.83
AFP-201ENST00000226359 ZNF608Q9ULD9 1512 aaPredicted RBP9.83□□□□□ -0.84
AFP-201ENST00000226359 FGD5Q6ZNL6 1462 aa9.83□□□□□ -0.84
AFP-201ENST00000226359 EIF4G3O43432 1585 aaKnown RBP9.82□□□□□ -0.84
AFP-201ENST00000226359 WDR97A6NE52 1622 aa9.82□□□□□ -0.84
AFP-201ENST00000226359 CUX1P39880 1505 aa9.81□□□□□ -0.84
AFP-201ENST00000226359 POTEB2H3BUK9 544 aa9.81□□□□□ -0.84
AFP-201ENST00000226359 MAMSTRQ6ZN01 415 aa9.81□□□□□ -0.84
AFP-201ENST00000226359 HAP1P54257 671 aaPredicted RBP9.8□□□□□ -0.84
AFP-201ENST00000226359 TARBP1Q13395 1621 aaKnown RBP9.8□□□□□ -0.84
AFP-201ENST00000226359 RAD54L2Q9Y4B4 1467 aa9.8□□□□□ -0.84
AFP-201ENST00000226359 AQRO60306 1485 aaKnown RBP eCLIP9.78□□□□□ -0.844e-18■■■■■ 34.5
AFP-201ENST00000226359 WRNQ14191 1432 aaPredicted RBP eCLIP9.78□□□□□ -0.84
AFP-201ENST00000226359 TDRD9Q8NDG6 1382 aaKnown RBP9.77□□□□□ -0.85
AFP-201ENST00000226359 GRIN2BQ13224 1484 aa9.76□□□□□ -0.85
AFP-201ENST00000226359 MAGI1Q96QZ7 1491 aaPredicted RBP9.74□□□□□ -0.85
AFP-201ENST00000226359 SNAPC4Q5SXM2 1469 aa9.74□□□□□ -0.85
AFP-201ENST00000226359 ABCA10Q8WWZ4 1543 aa9.74□□□□□ -0.85
AFP-201ENST00000226359 CHMP7Q8WUX9 453 aaPredicted RBP9.73□□□□□ -0.85
AFP-201ENST00000226359 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
AFP-201ENST00000226359 TOP2BQ02880 1626 aa9.72□□□□□ -0.85
AFP-201ENST00000226359 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
AFP-201ENST00000226359 BCANQ96GW7 911 aa9.72□□□□□ -0.85
AFP-201ENST00000226359 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
AFP-201ENST00000226359 TAOK2Q9UL54 1235 aa9.71□□□□□ -0.86
AFP-201ENST00000226359 BIVM-ERCC5R4GMW8 1640 aa9.71□□□□□ -0.86
AFP-201ENST00000226359 TRIM41Q8WV44 630 aa9.7□□□□□ -0.86
AFP-201ENST00000226359 FAM163AQ96GL9 167 aaPredicted RBP9.7□□□□□ -0.86
AFP-201ENST00000226359 SYNJ2O15056 1496 aa9.69□□□□□ -0.86
AFP-201ENST00000226359 PLCD3Q8N3E9 789 aa9.69□□□□□ -0.86
AFP-201ENST00000226359 SYNJ1O43426 1573 aa9.69□□□□□ -0.86
AFP-201ENST00000226359 GALR2O43603 387 aaPredicted RBP9.68□□□□□ -0.86
AFP-201ENST00000226359 KLHL34Q8N239 644 aa9.68□□□□□ -0.86
AFP-201ENST00000226359 ABCA5Q8WWZ7 1642 aa9.67□□□□□ -0.86
AFP-201ENST00000226359 LCE2DQ5TA82 110 aaPredicted RBP9.67□□□□□ -0.86
AFP-201ENST00000226359 CHD1O14646 1710 aa9.67□□□□□ -0.86
AFP-201ENST00000226359 MIER1Q8N108 512 aa9.66□□□□□ -0.86
AFP-201ENST00000226359 PBRM1Q86U86 1689 aa9.66□□□□□ -0.86
AFP-201ENST00000226359 SCUBE2Q9NQ36 999 aa9.64□□□□□ -0.87
AFP-201ENST00000226359 ARHGEF11O15085 1522 aa9.64□□□□□ -0.87
AFP-201ENST00000226359 FHAD1B1AJZ9 1412 aa9.63□□□□□ -0.87
AFP-201ENST00000226359 ERICH3Q5RHP9 1530 aa9.63□□□□□ -0.87
AFP-201ENST00000226359 RIMBP3CA6NJZ7 1639 aa9.62□□□□□ -0.87
AFP-201ENST00000226359 RIMBP3BA6NNM3 1639 aa9.62□□□□□ -0.87
AFP-201ENST00000226359 RIMBP3Q9UFD9 1639 aa9.62□□□□□ -0.87
AFP-201ENST00000226359 PKD2Q13563 968 aa9.62□□□□□ -0.87
AFP-201ENST00000226359 ADAMTS12P58397 1594 aa9.62□□□□□ -0.87
AFP-201ENST00000226359 CDAN1Q8IWY9 1227 aa9.62□□□□□ -0.87
AFP-201ENST00000226359 KIF27Q86VH2 1401 aa9.61□□□□□ -0.87
AFP-201ENST00000226359 C7P10643 843 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms