RNA–Protein interactions for RNA: ENST00000225831.4

CCL2-201, Transcript of C-C motif chemokine ligand 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL2, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2-201ENST00000225831 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
CCL2-201ENST00000225831 METRNQ9UJH8 293 aa14.31□□□□□ -0.12
CCL2-201ENST00000225831 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
CCL2-201ENST00000225831 MAMSTRQ6ZN01 415 aa14.3□□□□□ -0.12
CCL2-201ENST00000225831 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
CCL2-201ENST00000225831 C7P10643 843 aa14.27□□□□□ -0.13
CCL2-201ENST00000225831 PROM2Q8N271 834 aa14.27□□□□□ -0.13
CCL2-201ENST00000225831 SLC39A7Q92504 469 aa14.26□□□□□ -0.13
CCL2-201ENST00000225831 FAM163AQ96GL9 167 aaPredicted RBP14.23□□□□□ -0.13
CCL2-201ENST00000225831 ATMINO43313 823 aaPredicted RBP14.21□□□□□ -0.13
CCL2-201ENST00000225831 SCUBE2Q9NQ36 999 aa14.15□□□□□ -0.14
CCL2-201ENST00000225831 MS4A3Q96HJ5 214 aa14.14□□□□□ -0.15
CCL2-201ENST00000225831 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
CCL2-201ENST00000225831 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
CCL2-201ENST00000225831 FKBP8Q14318 412 aa14.09□□□□□ -0.15
CCL2-201ENST00000225831 CDAN1Q8IWY9 1227 aa14.04□□□□□ -0.16
CCL2-201ENST00000225831 POTEFA5A3E0 1075 aa14□□□□□ -0.17
CCL2-201ENST00000225831 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
CCL2-201ENST00000225831 MIER1Q8N108 512 aa13.9□□□□□ -0.18
CCL2-201ENST00000225831 BMP2KQ9NSY1 1161 aaPredicted RBP13.85□□□□□ -0.19
CCL2-201ENST00000225831 CCDC61Q9Y6R9 512 aa13.84□□□□□ -0.19
CCL2-201ENST00000225831 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
CCL2-201ENST00000225831 RB1CC1Q8TDY2 1594 aa13.82□□□□□ -0.2
CCL2-201ENST00000225831 KIF12Q96FN5 646 aa13.8□□□□□ -0.2
CCL2-201ENST00000225831 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
CCL2-201ENST00000225831 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
CCL2-201ENST00000225831 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
CCL2-201ENST00000225831 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
CCL2-201ENST00000225831 TIE1P35590 1138 aa13.77□□□□□ -0.21
CCL2-201ENST00000225831 TRPC6Q9Y210 931 aa13.77□□□□□ -0.21
CCL2-201ENST00000225831 ST18O60284 1047 aa13.76□□□□□ -0.21
CCL2-201ENST00000225831 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
CCL2-201ENST00000225831 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
CCL2-201ENST00000225831 SPNS2Q8IVW8 549 aa13.74□□□□□ -0.21
CCL2-201ENST00000225831 NACADO15069 1562 aa13.74□□□□□ -0.21
CCL2-201ENST00000225831 SEC24BO95487 1268 aa13.7□□□□□ -0.22
CCL2-201ENST00000225831 TTLL13PA6NNM8 815 aa13.65□□□□□ -0.22
CCL2-201ENST00000225831 MAP3K13O43283 966 aa13.65□□□□□ -0.22
CCL2-201ENST00000225831 NUBP1P53384 320 aa13.65□□□□□ -0.22
CCL2-201ENST00000225831 IER5LQ5T953 404 aa13.64□□□□□ -0.23
CCL2-201ENST00000225831 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
CCL2-201ENST00000225831 FBXO3Q9UK99 471 aa13.6□□□□□ -0.23
CCL2-201ENST00000225831 TMEM121BQ9BXQ6 578 aaPredicted RBP13.58□□□□□ -0.24
CCL2-201ENST00000225831 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
CCL2-201ENST00000225831 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
CCL2-201ENST00000225831 TRIM35Q9UPQ4 493 aa13.55□□□□□ -0.24
CCL2-201ENST00000225831 VASPP50552 380 aaPredicted RBP13.54□□□□□ -0.24
CCL2-201ENST00000225831 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
CCL2-201ENST00000225831 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
CCL2-201ENST00000225831 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
CCL2-201ENST00000225831 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
CCL2-201ENST00000225831 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
CCL2-201ENST00000225831 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
CCL2-201ENST00000225831 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
CCL2-201ENST00000225831 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
CCL2-201ENST00000225831 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
CCL2-201ENST00000225831 SNPHO15079 494 aa13.41□□□□□ -0.26
CCL2-201ENST00000225831 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
CCL2-201ENST00000225831 MARVELD3Q96A59 401 aa13.39□□□□□ -0.27
CCL2-201ENST00000225831 PYGBP11216 843 aa13.38□□□□□ -0.27
CCL2-201ENST00000225831 PLCG2P16885 1265 aa13.38□□□□□ -0.27
CCL2-201ENST00000225831 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
CCL2-201ENST00000225831 IRX5P78411 483 aaPredicted RBP13.36□□□□□ -0.27
CCL2-201ENST00000225831 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
CCL2-201ENST00000225831 KRTAP3-3Q9BYR6 98 aa13.3□□□□□ -0.28
CCL2-201ENST00000225831 KRTAP3-2Q9BYR7 98 aa13.3□□□□□ -0.28
CCL2-201ENST00000225831 TMEM106CQ9BVX2 250 aa13.29□□□□□ -0.28
CCL2-201ENST00000225831 PCDHB8Q9UN66 801 aa13.28□□□□□ -0.28
CCL2-201ENST00000225831 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.26□□□□□ -0.29
CCL2-201ENST00000225831 OCEL1Q9H607 264 aa13.25□□□□□ -0.29
CCL2-201ENST00000225831 EMP3P54852 163 aa13.23□□□□□ -0.29
CCL2-201ENST00000225831 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
CCL2-201ENST00000225831 GSE1Q14687 1217 aa13.22□□□□□ -0.29
CCL2-201ENST00000225831 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
CCL2-201ENST00000225831 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
CCL2-201ENST00000225831 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
CCL2-201ENST00000225831 HS3ST6Q96QI5 342 aa13.19□□□□□ -0.3
CCL2-201ENST00000225831 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
CCL2-201ENST00000225831 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
CCL2-201ENST00000225831 CHRM1P11229 460 aaPredicted RBP13.11□□□□□ -0.31
CCL2-201ENST00000225831 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
CCL2-201ENST00000225831 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
CCL2-201ENST00000225831 ZNF467Q7Z7K2 595 aaPredicted RBP13.07□□□□□ -0.32
CCL2-201ENST00000225831 PSEN1P49768 467 aa13.02□□□□□ -0.33
CCL2-201ENST00000225831 PDCD7Q8N8D1 485 aaKnown RBP13.02□□□□□ -0.33
CCL2-201ENST00000225831 C3orf67Q6ZVT6 689 aa13.01□□□□□ -0.33
CCL2-201ENST00000225831 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
CCL2-201ENST00000225831 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
CCL2-201ENST00000225831 CECR2Q9BXF3 1484 aa12.94□□□□□ -0.34
CCL2-201ENST00000225831 PDAP1Q13442 181 aaKnown RBP12.94□□□□□ -0.34
CCL2-201ENST00000225831 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
CCL2-201ENST00000225831 RNF25Q96BH1 459 aaPredicted RBP12.9□□□□□ -0.34
CCL2-201ENST00000225831 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
CCL2-201ENST00000225831 CABP2Q9NPB3 220 aa12.89□□□□□ -0.35
CCL2-201ENST00000225831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCL2-201ENST00000225831 HOXB3P14651 431 aaPredicted RBP12.85□□□□□ -0.35
CCL2-201ENST00000225831 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
CCL2-201ENST00000225831 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
CCL2-201ENST00000225831 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
CCL2-201ENST00000225831 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms