RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 RBM19Q9Y4C8 960 aaKnown RBP9.09□□□□□ -0.95
RBM28-201ENST00000223073 HMGB1P09429 215 aaKnown RBP9.09□□□□□ -0.95
RBM28-201ENST00000223073 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
RBM28-201ENST00000223073 TNNT3P45378 269 aaPredicted RBP9.08□□□□□ -0.96
RBM28-201ENST00000223073 SUPT16HQ9Y5B9 1047 aaKnown RBP9.08□□□□□ -0.96
RBM28-201ENST00000223073 TAF7LQ5H9L4 462 aa9.08□□□□□ -0.96
RBM28-201ENST00000223073 PNNQ9H307 717 aaKnown RBP9.07□□□□□ -0.96
RBM28-201ENST00000223073 PPP4R2Q9NY27 417 aa9.07□□□□□ -0.96
RBM28-201ENST00000223073 PLEKHG5O94827 1062 aa9.07□□□□□ -0.96
RBM28-201ENST00000223073 DNTTIP2Q5QJE6 756 aaKnown RBP9.07□□□□□ -0.96
RBM28-201ENST00000223073 CHAF1AQ13111 956 aaPredicted RBP9.06□□□□□ -0.96
RBM28-201ENST00000223073 MIER1Q8N108 512 aa9.06□□□□□ -0.96
RBM28-201ENST00000223073 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.05□□□□□ -0.96
RBM28-201ENST00000223073 MTERF4Q7Z6M4 381 aaKnown RBP9.03□□□□□ -0.96
RBM28-201ENST00000223073 HNRNPUQ00839 825 aaKnown RBP eCLIP9□□□□□ -0.97
RBM28-201ENST00000223073 MAP7D2Q96T17 732 aa9□□□□□ -0.97
RBM28-201ENST00000223073 MSNP26038 577 aaKnown RBP9□□□□□ -0.97
RBM28-201ENST00000223073 PTMAP06454 111 aaKnown RBP9□□□□□ -0.97
RBM28-201ENST00000223073 FANCIQ9NVI1 1328 aa8.99□□□□□ -0.97
RBM28-201ENST00000223073 GOLGA6L3A6NEY3 463 aa8.98□□□□□ -0.97
RBM28-201ENST00000223073 TSHZ2Q9NRE2 1034 aa8.98□□□□□ -0.97
RBM28-201ENST00000223073 TAF3Q5VWG9 929 aa8.97□□□□□ -0.97
RBM28-201ENST00000223073 ITGAEP38570 1179 aa8.96□□□□□ -0.97
RBM28-201ENST00000223073 HSP90B1P14625 803 aaKnown RBP8.96□□□□□ -0.98
RBM28-201ENST00000223073 SALL2Q9Y467 1007 aaPredicted RBP8.95□□□□□ -0.98
RBM28-201ENST00000223073 TIMELESSQ9UNS1 1208 aa8.94□□□□□ -0.98
RBM28-201ENST00000223073 PATL2C9JE40 543 aaKnown RBP8.94□□□□□ -0.98
RBM28-201ENST00000223073 GOLGA6L6A8MZA4 724 aa8.94□□□□□ -0.98
RBM28-201ENST00000223073 IPO9Q96P70 1041 aaKnown RBP8.93□□□□□ -0.98
RBM28-201ENST00000223073 NRDCO43847 1150 aa8.93□□□□□ -0.98
RBM28-201ENST00000223073 RRP9O43818 475 aaKnown RBP8.92□□□□□ -0.98
RBM28-201ENST00000223073 ZNF526Q8TF50 670 aaPredicted RBP8.9□□□□□ -0.98
RBM28-201ENST00000223073 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
RBM28-201ENST00000223073 KIAA2012Q0VF49 1180 aa8.88□□□□□ -0.99
RBM28-201ENST00000223073 BRD2P25440 801 aaKnown RBP8.87□□□□□ -0.99
RBM28-201ENST00000223073 TCERG1O14776 1098 aaKnown RBP8.87□□□□□ -0.99
RBM28-201ENST00000223073 CCER2I3L3R5 266 aa8.87□□□□□ -0.99
RBM28-201ENST00000223073 PAXIP1Q6ZW49 1069 aaPredicted RBP8.87□□□□□ -0.99
RBM28-201ENST00000223073 TPRNQ4KMQ1 711 aa8.87□□□□□ -0.99
RBM28-201ENST00000223073 TRIM52Q96A61 297 aa8.86□□□□□ -0.99
RBM28-201ENST00000223073 DDX10Q13206 875 aaKnown RBP8.86□□□□□ -0.99
RBM28-201ENST00000223073 SETQ01105 290 aaPredicted RBP8.86□□□□□ -0.99
RBM28-201ENST00000223073 GOLGA6L1Q8N7Z2 621 aa8.86□□□□□ -0.99
RBM28-201ENST00000223073 TPM2P07951 284 aa8.85□□□□□ -0.99
RBM28-201ENST00000223073 GSE1Q14687 1217 aa8.85□□□□□ -0.99
RBM28-201ENST00000223073 CSPP1Q1MSJ5 1256 aa8.85□□□□□ -0.99
RBM28-201ENST00000223073 CFAP44Q96MT7 982 aa8.85□□□□□ -0.99
RBM28-201ENST00000223073 TMC1Q8TDI8 760 aa8.84□□□□□ -0.99
RBM28-201ENST00000223073 GBP4Q96PP9 640 aa8.83□□□□□ -1
RBM28-201ENST00000223073 CCDC180Q9P1Z9 1646 aa8.82□□□□□ -1
RBM28-201ENST00000223073 ARID3AQ99856 593 aa8.82□□□□□ -1
RBM28-201ENST00000223073 CASC1Q6TDU7 716 aa8.82□□□□□ -1
RBM28-201ENST00000223073 MRS2Q9HD23 443 aa8.82□□□□□ -1
RBM28-201ENST00000223073 PLPPR3Q6T4P5 718 aa8.82□□□□□ -1
RBM28-201ENST00000223073 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.81□□□□□ -1
RBM28-201ENST00000223073 NOM1Q5C9Z4 860 aaKnown RBP8.81□□□□□ -1
RBM28-201ENST00000223073 ZMYND15Q9H091 742 aa8.81□□□□□ -1
RBM28-201ENST00000223073 SKOR2Q2VWA4 1001 aaPredicted RBP8.8□□□□□ -1
RBM28-201ENST00000223073 FAM43AQ8N2R8 423 aa8.8□□□□□ -1
RBM28-201ENST00000223073 FAM50AQ14320 339 aaKnown RBP8.8□□□□□ -1
RBM28-201ENST00000223073 ZRSR1Q15695 479 aaKnown RBP8.79□□□□□ -1
RBM28-201ENST00000223073 ZNF771Q7L3S4 317 aaPredicted RBP8.79□□□□□ -1
RBM28-201ENST00000223073 KLHL34Q8N239 644 aa8.79□□□□□ -1
RBM28-201ENST00000223073 MYH16Q9H6N6 1097 aa8.79□□□□□ -1
RBM28-201ENST00000223073 TEX35Q5T0J7 233 aa8.79□□□□□ -1
RBM28-201ENST00000223073 FAM9BQ8IZU0 186 aa8.79□□□□□ -1
RBM28-201ENST00000223073 CHMP4BQ9H444 224 aaKnown RBP8.79□□□□□ -1
RBM28-201ENST00000223073 CCDC66A2RUB6 948 aa8.78□□□□□ -1
RBM28-201ENST00000223073 SYAP1Q96A49 352 aaPredicted RBP8.78□□□□□ -1
RBM28-201ENST00000223073 GPS2Q13227 327 aa8.77□□□□□ -1.01
RBM28-201ENST00000223073 HSCBQ8IWL3 235 aa8.77□□□□□ -1.01
RBM28-201ENST00000223073 BCL11BQ9C0K0 894 aaPredicted RBP8.77□□□□□ -1.01
RBM28-201ENST00000223073 BBXQ8WY36 941 aaPredicted RBP8.76□□□□□ -1.01
RBM28-201ENST00000223073 TSPYL1Q9H0U9 437 aa8.76□□□□□ -1.01
RBM28-201ENST00000223073 PHF14O94880 888 aa8.76□□□□□ -1.01
RBM28-201ENST00000223073 DDX11L8A8MPP1 907 aa8.76□□□□□ -1.01
RBM28-201ENST00000223073 RBM10P98175 930 aaKnown RBP8.75□□□□□ -1.01
RBM28-201ENST00000223073 TONSLQ96HA7 1378 aa8.75□□□□□ -1.01
RBM28-201ENST00000223073 WWC1Q8IX03 1113 aa8.75□□□□□ -1.01
RBM28-201ENST00000223073 HTATSF1O43719 755 aaKnown RBP8.74□□□□□ -1.01
RBM28-201ENST00000223073 MS4A1P11836 297 aa8.74□□□□□ -1.01
RBM28-201ENST00000223073 CWC15Q9P013 229 aaKnown RBP8.73□□□□□ -1.01
RBM28-201ENST00000223073 NAP1L2Q9ULW6 460 aaPredicted RBP8.73□□□□□ -1.01
RBM28-201ENST00000223073 STK11IPQ8N1F8 1099 aa8.73□□□□□ -1.01
RBM28-201ENST00000223073 ISY1Q9ULR0 285 aaKnown RBP8.73□□□□□ -1.01
RBM28-201ENST00000223073 IRX3P78415 501 aaPredicted RBP8.71□□□□□ -1.01
RBM28-201ENST00000223073 IRX6P78412 446 aaPredicted RBP8.71□□□□□ -1.02
RBM28-201ENST00000223073 AXDND1Q5T1B0 1012 aaPredicted RBP8.71□□□□□ -1.02
RBM28-201ENST00000223073 NEFHP12036 1026 aa8.71□□□□□ -1.02
RBM28-201ENST00000223073 FGD1P98174 961 aa8.7□□□□□ -1.02
RBM28-201ENST00000223073 HSP90AB1P08238 724 aaKnown RBP8.7□□□□□ -1.02
RBM28-201ENST00000223073 SLC4A1APQ9BWU0 796 aaKnown RBP8.69□□□□□ -1.02
RBM28-201ENST00000223073 HMGN5P82970 282 aaKnown RBP8.69□□□□□ -1.02
RBM28-201ENST00000223073 B4GALNT3Q6L9W6 998 aa8.69□□□□□ -1.02
RBM28-201ENST00000223073 PSMD1Q99460 953 aa8.69□□□□□ -1.02
RBM28-201ENST00000223073 OS9Q13438 667 aaPredicted RBP8.68□□□□□ -1.02
RBM28-201ENST00000223073 CC2D1BQ5T0F9 858 aaKnown RBP8.68□□□□□ -1.02
RBM28-201ENST00000223073 WDR43Q15061 677 aaKnown RBP eCLIP8.68□□□□□ -1.02
RBM28-201ENST00000223073 FAM13BQ9NYF5 915 aa8.67□□□□□ -1.02
RBM28-201ENST00000223073 EIF4G2P78344 907 aaKnown RBP eCLIP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms