RNA–Protein interactions for RNA: ENST00000222753.5

HOXA13-201, Transcript of homeobox A13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA13, Length 5,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-201ENST00000222753 WDR43Q15061 677 aaKnown RBP eCLIP24.69■■□□□ 1.54
HOXA13-201ENST00000222753 BCL11AQ9H165 835 aa24.66■■□□□ 1.54
HOXA13-201ENST00000222753 NACADO15069 1562 aa24.66■■□□□ 1.54
HOXA13-201ENST00000222753 PPM1GO15355 546 aaPredicted RBP24.65■■□□□ 1.54
HOXA13-201ENST00000222753 TIMELESSQ9UNS1 1208 aa24.63■■□□□ 1.53
HOXA13-201ENST00000222753 CCER2I3L3R5 266 aa24.59■■□□□ 1.53
HOXA13-201ENST00000222753 BECN1Q14457 450 aa24.59■■□□□ 1.53
HOXA13-201ENST00000222753 NOP58Q9Y2X3 529 aaKnown RBP24.57■■□□□ 1.52
HOXA13-201ENST00000222753 NPM1P06748 294 aaKnown RBP eCLIP24.55■■□□□ 1.52
HOXA13-201ENST00000222753 TSPY4P0CV99 314 aa24.54■■□□□ 1.52
HOXA13-201ENST00000222753 TSPY10P0CW01 314 aa24.54■■□□□ 1.52
HOXA13-201ENST00000222753 RRP7BPQ9NSQ0 103 aa24.53■■□□□ 1.52
HOXA13-201ENST00000222753 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
HOXA13-201ENST00000222753 KDM2AQ9Y2K7 1162 aa24.5■■□□□ 1.51
HOXA13-201ENST00000222753 RBM19Q9Y4C8 960 aaKnown RBP24.5■■□□□ 1.51
HOXA13-201ENST00000222753 CCNB3Q8WWL7 1395 aa24.5■■□□□ 1.51
HOXA13-201ENST00000222753 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
HOXA13-201ENST00000222753 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
HOXA13-201ENST00000222753 CHGAP10645 457 aaKnown RBP24.47■■□□□ 1.51
HOXA13-201ENST00000222753 ERICH6BQ5W0A0 696 aa24.47■■□□□ 1.51
HOXA13-201ENST00000222753 ESF1Q9H501 851 aaKnown RBP24.47■■□□□ 1.51
HOXA13-201ENST00000222753 SIN3AQ96ST3 1273 aa24.46■■□□□ 1.51
HOXA13-201ENST00000222753 ARXQ96QS3 562 aa24.44■■□□□ 1.5
HOXA13-201ENST00000222753 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
HOXA13-201ENST00000222753 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
HOXA13-201ENST00000222753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.5
HOXA13-201ENST00000222753 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
HOXA13-201ENST00000222753 TRIM44Q96DX7 344 aaPredicted RBP24.37■■□□□ 1.49
HOXA13-201ENST00000222753 STAG3Q9UJ98 1225 aa24.37■■□□□ 1.49
HOXA13-201ENST00000222753 TSHZ2Q9NRE2 1034 aa24.36■■□□□ 1.49
HOXA13-201ENST00000222753 B4GALNT3Q6L9W6 998 aa24.35■■□□□ 1.49
HOXA13-201ENST00000222753 SOGA1O94964 1423 aa24.33■■□□□ 1.49
HOXA13-201ENST00000222753 DEKP35659 375 aaKnown RBP24.32■■□□□ 1.48
HOXA13-201ENST00000222753 GOLGA6L22H0YM25 854 aa24.3■■□□□ 1.48
HOXA13-201ENST00000222753 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
HOXA13-201ENST00000222753 LAS1LQ9Y4W2 734 aaKnown RBP24.29■■□□□ 1.48
HOXA13-201ENST00000222753 SENP3-EIF4A1A0A087X0R7 540 aa24.28■■□□□ 1.48
HOXA13-201ENST00000222753 SETD5Q9C0A6 1442 aa24.28■■□□□ 1.48
HOXA13-201ENST00000222753 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
HOXA13-201ENST00000222753 CDCA8Q53HL2 280 aa24.28■■□□□ 1.48
HOXA13-201ENST00000222753 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
HOXA13-201ENST00000222753 CARD11Q9BXL7 1154 aa24.26■■□□□ 1.47
HOXA13-201ENST00000222753 PLEKHD1A6NEE1 506 aa24.22■■□□□ 1.47
HOXA13-201ENST00000222753 KNSTRNQ9Y448 316 aa24.21■■□□□ 1.47
HOXA13-201ENST00000222753 RTN4Q9NQC3 1192 aaKnown RBP24.16■■□□□ 1.46
HOXA13-201ENST00000222753 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
HOXA13-201ENST00000222753 CFDP1Q9UEE9 299 aaPredicted RBP24.13■■□□□ 1.45
HOXA13-201ENST00000222753 NCLP19338 710 aaKnown RBP24.12■■□□□ 1.45
HOXA13-201ENST00000222753 KCNH8Q96L42 1107 aa24.12■■□□□ 1.45
HOXA13-201ENST00000222753 RGS3P49796 1198 aa24.11■■□□□ 1.45
HOXA13-201ENST00000222753 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
HOXA13-201ENST00000222753 PLPPR3Q6T4P5 718 aa24.09■■□□□ 1.45
HOXA13-201ENST00000222753 RGL3Q3MIN7 710 aa24.09■■□□□ 1.45
HOXA13-201ENST00000222753 RAB3GAP2Q9H2M9 1393 aa24.09■■□□□ 1.45
HOXA13-201ENST00000222753 NAP1L5Q96NT1 182 aaPredicted RBP24.07■■□□□ 1.44
HOXA13-201ENST00000222753 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
HOXA13-201ENST00000222753 KANK4Q5T7N3 995 aaPredicted RBP24.06■■□□□ 1.44
HOXA13-201ENST00000222753 PPP1R15AO75807 674 aaPredicted RBP24.05■■□□□ 1.44
HOXA13-201ENST00000222753 L1TD1Q5T7N2 865 aaKnown RBP24.05■■□□□ 1.44
HOXA13-201ENST00000222753 TCERG1O14776 1098 aaKnown RBP24.04■■□□□ 1.44
HOXA13-201ENST00000222753 FTSJ3Q8IY81 847 aaKnown RBP24.04■■□□□ 1.44
HOXA13-201ENST00000222753 TNNT2P45379 298 aaPredicted RBP24.03■■□□□ 1.44
HOXA13-201ENST00000222753 ARHGAP35Q9NRY4 1499 aa24.02■■□□□ 1.44
HOXA13-201ENST00000222753 MS4A1P11836 297 aa24.02■■□□□ 1.44
HOXA13-201ENST00000222753 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.44
HOXA13-201ENST00000222753 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
HOXA13-201ENST00000222753 ABCC8Q09428 1581 aa24■■□□□ 1.43
HOXA13-201ENST00000222753 PTMAP06454 111 aaKnown RBP23.97■■□□□ 1.43
HOXA13-201ENST00000222753 IPO9Q96P70 1041 aaKnown RBP23.96■■□□□ 1.43
HOXA13-201ENST00000222753 CHMP4BQ9H444 224 aaKnown RBP23.96■■□□□ 1.43
HOXA13-201ENST00000222753 CASC1Q6TDU7 716 aa23.96■■□□□ 1.43
HOXA13-201ENST00000222753 TMF1P82094 1093 aa23.92■■□□□ 1.42
HOXA13-201ENST00000222753 DHX57Q6P158 1386 aaKnown RBP23.92■■□□□ 1.42
HOXA13-201ENST00000222753 CUX2O14529 1486 aa23.92■■□□□ 1.42
HOXA13-201ENST00000222753 CC2D1BQ5T0F9 858 aaKnown RBP23.91■■□□□ 1.42
HOXA13-201ENST00000222753 FRAT1Q92837 279 aaPredicted RBP23.91■■□□□ 1.42
HOXA13-201ENST00000222753 RCAN3Q9UKA8 241 aa23.91■■□□□ 1.42
HOXA13-201ENST00000222753 NUDCQ9Y266 331 aa23.91■■□□□ 1.42
HOXA13-201ENST00000222753 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
HOXA13-201ENST00000222753 RALBP1Q15311 655 aa23.88■■□□□ 1.41
HOXA13-201ENST00000222753 DNTTIP2Q5QJE6 756 aaKnown RBP23.87■■□□□ 1.41
HOXA13-201ENST00000222753 HSP90AB1P08238 724 aaKnown RBP23.87■■□□□ 1.41
HOXA13-201ENST00000222753 MAPK8IP3Q9UPT6 1336 aa23.86■■□□□ 1.41
HOXA13-201ENST00000222753 NEUROD2Q15784 382 aa23.86■■□□□ 1.41
HOXA13-201ENST00000222753 HSCBQ8IWL3 235 aa23.86■■□□□ 1.41
HOXA13-201ENST00000222753 KTN1Q86UP2 1357 aaKnown RBP23.85■■□□□ 1.41
HOXA13-201ENST00000222753 DCAF11Q8TEB1 546 aa23.84■■□□□ 1.41
HOXA13-201ENST00000222753 FANCIQ9NVI1 1328 aa23.84■■□□□ 1.41
HOXA13-201ENST00000222753 USP35Q9P2H5 1018 aa23.82■■□□□ 1.4
HOXA13-201ENST00000222753 FMN1Q68DA7 1419 aa23.81■■□□□ 1.4
HOXA13-201ENST00000222753 PDE3BQ13370 1112 aa23.79■■□□□ 1.4
HOXA13-201ENST00000222753 MPHOSPH9Q99550 1183 aa23.78■■□□□ 1.4
HOXA13-201ENST00000222753 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
HOXA13-201ENST00000222753 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
HOXA13-201ENST00000222753 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
HOXA13-201ENST00000222753 CFAP44Q96MT7 982 aa23.74■■□□□ 1.39
HOXA13-201ENST00000222753 PTMSP20962 102 aa23.74■■□□□ 1.39
HOXA13-201ENST00000222753 PNNQ9H307 717 aaKnown RBP23.73■■□□□ 1.39
HOXA13-201ENST00000222753 ARID4BQ4LE39 1312 aaPredicted RBP23.73■■□□□ 1.39
HOXA13-201ENST00000222753 MSNP26038 577 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms