RNA–Protein interactions for RNA: ENST00000222753.5

HOXA13-201, Transcript of homeobox A13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA13, Length 5,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-201ENST00000222753 WDR43Q15061 677 aaKnown RBP eCLIP24.69■■□□□ 1.54
HOXA13-201ENST00000222753 BCL11AQ9H165 835 aa24.66■■□□□ 1.54
HOXA13-201ENST00000222753 NACADO15069 1562 aa24.66■■□□□ 1.54
HOXA13-201ENST00000222753 PPM1GO15355 546 aaPredicted RBP24.65■■□□□ 1.54
HOXA13-201ENST00000222753 TIMELESSQ9UNS1 1208 aa24.63■■□□□ 1.53
HOXA13-201ENST00000222753 CCER2I3L3R5 266 aa24.59■■□□□ 1.53
HOXA13-201ENST00000222753 BECN1Q14457 450 aa24.59■■□□□ 1.53
HOXA13-201ENST00000222753 NOP58Q9Y2X3 529 aaKnown RBP24.57■■□□□ 1.52
HOXA13-201ENST00000222753 NPM1P06748 294 aaKnown RBP eCLIP24.55■■□□□ 1.52
HOXA13-201ENST00000222753 TSPY4P0CV99 314 aa24.54■■□□□ 1.52
HOXA13-201ENST00000222753 TSPY10P0CW01 314 aa24.54■■□□□ 1.52
HOXA13-201ENST00000222753 RRP7BPQ9NSQ0 103 aa24.53■■□□□ 1.52
HOXA13-201ENST00000222753 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
HOXA13-201ENST00000222753 KDM2AQ9Y2K7 1162 aa24.5■■□□□ 1.51
HOXA13-201ENST00000222753 RBM19Q9Y4C8 960 aaKnown RBP24.5■■□□□ 1.51
HOXA13-201ENST00000222753 CCNB3Q8WWL7 1395 aa24.5■■□□□ 1.51
HOXA13-201ENST00000222753 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
HOXA13-201ENST00000222753 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
HOXA13-201ENST00000222753 CHGAP10645 457 aaKnown RBP24.47■■□□□ 1.51
HOXA13-201ENST00000222753 ERICH6BQ5W0A0 696 aa24.47■■□□□ 1.51
HOXA13-201ENST00000222753 ESF1Q9H501 851 aaKnown RBP24.47■■□□□ 1.51
HOXA13-201ENST00000222753 SIN3AQ96ST3 1273 aa24.46■■□□□ 1.51
HOXA13-201ENST00000222753 ARXQ96QS3 562 aa24.44■■□□□ 1.5
HOXA13-201ENST00000222753 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
HOXA13-201ENST00000222753 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
HOXA13-201ENST00000222753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.5
HOXA13-201ENST00000222753 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
HOXA13-201ENST00000222753 TRIM44Q96DX7 344 aaPredicted RBP24.37■■□□□ 1.49
HOXA13-201ENST00000222753 STAG3Q9UJ98 1225 aa24.37■■□□□ 1.49
HOXA13-201ENST00000222753 TSHZ2Q9NRE2 1034 aa24.36■■□□□ 1.49
HOXA13-201ENST00000222753 B4GALNT3Q6L9W6 998 aa24.35■■□□□ 1.49
HOXA13-201ENST00000222753 SOGA1O94964 1423 aa24.33■■□□□ 1.49
HOXA13-201ENST00000222753 DEKP35659 375 aaKnown RBP24.32■■□□□ 1.48
HOXA13-201ENST00000222753 GOLGA6L22H0YM25 854 aa24.3■■□□□ 1.48
HOXA13-201ENST00000222753 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
HOXA13-201ENST00000222753 LAS1LQ9Y4W2 734 aaKnown RBP24.29■■□□□ 1.48
HOXA13-201ENST00000222753 SENP3-EIF4A1A0A087X0R7 540 aa24.28■■□□□ 1.48
HOXA13-201ENST00000222753 SETD5Q9C0A6 1442 aa24.28■■□□□ 1.48
HOXA13-201ENST00000222753 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
HOXA13-201ENST00000222753 CDCA8Q53HL2 280 aa24.28■■□□□ 1.48
HOXA13-201ENST00000222753 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
HOXA13-201ENST00000222753 CARD11Q9BXL7 1154 aa24.26■■□□□ 1.47
HOXA13-201ENST00000222753 PLEKHD1A6NEE1 506 aa24.22■■□□□ 1.47
HOXA13-201ENST00000222753 KNSTRNQ9Y448 316 aa24.21■■□□□ 1.47
HOXA13-201ENST00000222753 RTN4Q9NQC3 1192 aaKnown RBP24.16■■□□□ 1.46
HOXA13-201ENST00000222753 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
HOXA13-201ENST00000222753 CFDP1Q9UEE9 299 aaPredicted RBP24.13■■□□□ 1.45
HOXA13-201ENST00000222753 NCLP19338 710 aaKnown RBP24.12■■□□□ 1.45
HOXA13-201ENST00000222753 KCNH8Q96L42 1107 aa24.12■■□□□ 1.45
HOXA13-201ENST00000222753 RGS3P49796 1198 aa24.11■■□□□ 1.45
HOXA13-201ENST00000222753 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
HOXA13-201ENST00000222753 PLPPR3Q6T4P5 718 aa24.09■■□□□ 1.45
HOXA13-201ENST00000222753 RGL3Q3MIN7 710 aa24.09■■□□□ 1.45
HOXA13-201ENST00000222753 RAB3GAP2Q9H2M9 1393 aa24.09■■□□□ 1.45
HOXA13-201ENST00000222753 NAP1L5Q96NT1 182 aaPredicted RBP24.07■■□□□ 1.44
HOXA13-201ENST00000222753 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
HOXA13-201ENST00000222753 KANK4Q5T7N3 995 aaPredicted RBP24.06■■□□□ 1.44
HOXA13-201ENST00000222753 PPP1R15AO75807 674 aaPredicted RBP24.05■■□□□ 1.44
HOXA13-201ENST00000222753 L1TD1Q5T7N2 865 aaKnown RBP24.05■■□□□ 1.44
HOXA13-201ENST00000222753 TCERG1O14776 1098 aaKnown RBP24.04■■□□□ 1.44
HOXA13-201ENST00000222753 FTSJ3Q8IY81 847 aaKnown RBP24.04■■□□□ 1.44
HOXA13-201ENST00000222753 TNNT2P45379 298 aaPredicted RBP24.03■■□□□ 1.44
HOXA13-201ENST00000222753 ARHGAP35Q9NRY4 1499 aa24.02■■□□□ 1.44
HOXA13-201ENST00000222753 MS4A1P11836 297 aa24.02■■□□□ 1.44
HOXA13-201ENST00000222753 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.44
HOXA13-201ENST00000222753 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
HOXA13-201ENST00000222753 ABCC8Q09428 1581 aa24■■□□□ 1.43
HOXA13-201ENST00000222753 PTMAP06454 111 aaKnown RBP23.97■■□□□ 1.43
HOXA13-201ENST00000222753 IPO9Q96P70 1041 aaKnown RBP23.96■■□□□ 1.43
HOXA13-201ENST00000222753 CHMP4BQ9H444 224 aaKnown RBP23.96■■□□□ 1.43
HOXA13-201ENST00000222753 CASC1Q6TDU7 716 aa23.96■■□□□ 1.43
HOXA13-201ENST00000222753 TMF1P82094 1093 aa23.92■■□□□ 1.42
HOXA13-201ENST00000222753 DHX57Q6P158 1386 aaKnown RBP23.92■■□□□ 1.42
HOXA13-201ENST00000222753 CUX2O14529 1486 aa23.92■■□□□ 1.42
HOXA13-201ENST00000222753 CC2D1BQ5T0F9 858 aaKnown RBP23.91■■□□□ 1.42
HOXA13-201ENST00000222753 FRAT1Q92837 279 aaPredicted RBP23.91■■□□□ 1.42
HOXA13-201ENST00000222753 RCAN3Q9UKA8 241 aa23.91■■□□□ 1.42
HOXA13-201ENST00000222753 NUDCQ9Y266 331 aa23.91■■□□□ 1.42
HOXA13-201ENST00000222753 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
HOXA13-201ENST00000222753 RALBP1Q15311 655 aa23.88■■□□□ 1.41
HOXA13-201ENST00000222753 DNTTIP2Q5QJE6 756 aaKnown RBP23.87■■□□□ 1.41
HOXA13-201ENST00000222753 HSP90AB1P08238 724 aaKnown RBP23.87■■□□□ 1.41
HOXA13-201ENST00000222753 MAPK8IP3Q9UPT6 1336 aa23.86■■□□□ 1.41
HOXA13-201ENST00000222753 NEUROD2Q15784 382 aa23.86■■□□□ 1.41
HOXA13-201ENST00000222753 HSCBQ8IWL3 235 aa23.86■■□□□ 1.41
HOXA13-201ENST00000222753 KTN1Q86UP2 1357 aaKnown RBP23.85■■□□□ 1.41
HOXA13-201ENST00000222753 DCAF11Q8TEB1 546 aa23.84■■□□□ 1.41
HOXA13-201ENST00000222753 FANCIQ9NVI1 1328 aa23.84■■□□□ 1.41
HOXA13-201ENST00000222753 USP35Q9P2H5 1018 aa23.82■■□□□ 1.4
HOXA13-201ENST00000222753 FMN1Q68DA7 1419 aa23.81■■□□□ 1.4
HOXA13-201ENST00000222753 PDE3BQ13370 1112 aa23.79■■□□□ 1.4
HOXA13-201ENST00000222753 MPHOSPH9Q99550 1183 aa23.78■■□□□ 1.4
HOXA13-201ENST00000222753 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
HOXA13-201ENST00000222753 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
HOXA13-201ENST00000222753 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
HOXA13-201ENST00000222753 CFAP44Q96MT7 982 aa23.74■■□□□ 1.39
HOXA13-201ENST00000222753 PTMSP20962 102 aa23.74■■□□□ 1.39
HOXA13-201ENST00000222753 PNNQ9H307 717 aaKnown RBP23.73■■□□□ 1.39
HOXA13-201ENST00000222753 ARID4BQ4LE39 1312 aaPredicted RBP23.73■■□□□ 1.39
HOXA13-201ENST00000222753 MSNP26038 577 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms