RNA–Protein interactions for RNA: ENST00000182527.3

TRAM2-201, Transcript of translocation associated membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM2, Length 6,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-201ENST00000182527 KANK1Q14678 1352 aa10.39□□□□□ -0.75
TRAM2-201ENST00000182527 POGZQ7Z3K3 1410 aa10.38□□□□□ -0.75
TRAM2-201ENST00000182527 DNAJC5BQ9UF47 199 aa10.37□□□□□ -0.75
TRAM2-201ENST00000182527 CSB-PGBD3P0DP91 1061 aa10.36□□□□□ -0.75
TRAM2-201ENST00000182527 G3V3G9 751 aa10.36□□□□□ -0.75
TRAM2-201ENST00000182527 GOLGA2Q08379 1002 aa10.36□□□□□ -0.75
TRAM2-201ENST00000182527 DCAF8Q5TAQ9 597 aa10.36□□□□□ -0.75
TRAM2-201ENST00000182527 EIF4G2P78344 907 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRAM2-201ENST00000182527 GGT6Q6P531 493 aa10.35□□□□□ -0.75
TRAM2-201ENST00000182527 ATF3P18847 181 aa10.35□□□□□ -0.75
TRAM2-201ENST00000182527 UBAP1LF5GYI3 381 aa10.34□□□□□ -0.75
TRAM2-201ENST00000182527 TOM1O60784 492 aa10.33□□□□□ -0.76
TRAM2-201ENST00000182527 EIF4G1Q04637 1599 aaKnown RBP10.33□□□□□ -0.76
TRAM2-201ENST00000182527 EVA1CP58658 441 aa10.33□□□□□ -0.76
TRAM2-201ENST00000182527 DISP3Q9P2K9 1392 aa10.33□□□□□ -0.76
TRAM2-201ENST00000182527 C16orf71Q8IYS4 520 aaPredicted RBP10.32□□□□□ -0.76
TRAM2-201ENST00000182527 HMGB2P26583 209 aaKnown RBP10.32□□□□□ -0.76
TRAM2-201ENST00000182527 BCL11AQ9H165 835 aa10.32□□□□□ -0.76
TRAM2-201ENST00000182527 POGKQ9P215 609 aa10.31□□□□□ -0.76
TRAM2-201ENST00000182527 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.3□□□□□ -0.76
TRAM2-201ENST00000182527 EFCAB2Q5VUJ9 269 aa10.29□□□□□ -0.76
TRAM2-201ENST00000182527 NEFLP07196 543 aa10.28□□□□□ -0.76
TRAM2-201ENST00000182527 CLIP1P30622 1438 aa10.27□□□□□ -0.77
TRAM2-201ENST00000182527 YTHDC1Q96MU7 727 aaKnown RBP10.26□□□□□ -0.77
TRAM2-201ENST00000182527 PAK3O75914 559 aaPredicted RBP10.25□□□□□ -0.77
TRAM2-201ENST00000182527 CWC22Q9HCG8 908 aaKnown RBP10.24□□□□□ -0.77
TRAM2-201ENST00000182527 CFDP1Q9UEE9 299 aaPredicted RBP10.24□□□□□ -0.77
TRAM2-201ENST00000182527 PAXIP1Q6ZW49 1069 aaPredicted RBP10.24□□□□□ -0.77
TRAM2-201ENST00000182527 SOGA1O94964 1423 aa10.23□□□□□ -0.77
TRAM2-201ENST00000182527 ZEB1P37275 1124 aaPredicted RBP10.23□□□□□ -0.77
TRAM2-201ENST00000182527 CENPBP07199 599 aaPredicted RBP10.23□□□□□ -0.77
TRAM2-201ENST00000182527 WASHC2AQ641Q2 1341 aa10.22□□□□□ -0.77
TRAM2-201ENST00000182527 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
TRAM2-201ENST00000182527 CADPSQ9ULU8 1353 aa10.21□□□□□ -0.77
TRAM2-201ENST00000182527 CUX2O14529 1486 aa10.21□□□□□ -0.78
TRAM2-201ENST00000182527 ABCC8Q09428 1581 aa10.2□□□□□ -0.78
TRAM2-201ENST00000182527 MTUS2Q5JR59 1369 aa10.2□□□□□ -0.78
TRAM2-201ENST00000182527 SRPK2P78362 688 aaKnown RBP10.2□□□□□ -0.78
TRAM2-201ENST00000182527 JPH4Q96JJ6 628 aa10.2□□□□□ -0.78
TRAM2-201ENST00000182527 PCGF6Q9BYE7 350 aa10.2□□□□□ -0.78
TRAM2-201ENST00000182527 FKBP8Q14318 412 aa10.17□□□□□ -0.78
TRAM2-201ENST00000182527 PTPRGP23470 1445 aa10.16□□□□□ -0.78
TRAM2-201ENST00000182527 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
TRAM2-201ENST00000182527 WRNQ14191 1432 aaPredicted RBP eCLIP10.16□□□□□ -0.78
TRAM2-201ENST00000182527 WASHC2CQ9Y4E1 1318 aa10.16□□□□□ -0.78
TRAM2-201ENST00000182527 NEUROD2Q15784 382 aa10.15□□□□□ -0.78
TRAM2-201ENST00000182527 TDRD9Q8NDG6 1382 aaKnown RBP10.15□□□□□ -0.78
TRAM2-201ENST00000182527 NBPF8Q3BBV2 869 aa10.15□□□□□ -0.78
TRAM2-201ENST00000182527 NBPF14Q5TI25 921 aa10.15□□□□□ -0.78
TRAM2-201ENST00000182527 MRC2Q9UBG0 1479 aa10.15□□□□□ -0.79
TRAM2-201ENST00000182527 CANXP27824 592 aaKnown RBP10.14□□□□□ -0.79
TRAM2-201ENST00000182527 TULP1O00294 542 aaPredicted RBP10.14□□□□□ -0.79
TRAM2-201ENST00000182527 MAP3K9P80192 1104 aa10.14□□□□□ -0.79
TRAM2-201ENST00000182527 NGLY1Q96IV0 654 aa10.14□□□□□ -0.79
TRAM2-201ENST00000182527 RSF1Q96T23 1441 aaPredicted RBP10.13□□□□□ -0.79
TRAM2-201ENST00000182527 CC2D2AQ9P2K1 1620 aa10.13□□□□□ -0.79
TRAM2-201ENST00000182527 CLSPNQ9HAW4 1339 aa10.13□□□□□ -0.79
TRAM2-201ENST00000182527 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
TRAM2-201ENST00000182527 ANKLE2Q86XL3 938 aa10.12□□□□□ -0.79
TRAM2-201ENST00000182527 KIF27Q86VH2 1401 aa10.12□□□□□ -0.79
TRAM2-201ENST00000182527 THEMISQ8N1K5 641 aaPredicted RBP10.1□□□□□ -0.79
TRAM2-201ENST00000182527 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
TRAM2-201ENST00000182527 ISY1Q9ULR0 285 aaKnown RBP10.1□□□□□ -0.79
TRAM2-201ENST00000182527 NCBP3Q53F19 620 aaKnown RBP10.1□□□□□ -0.79
TRAM2-201ENST00000182527 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
TRAM2-201ENST00000182527 FANCD2Q9BXW9 1451 aa10.09□□□□□ -0.79
TRAM2-201ENST00000182527 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
TRAM2-201ENST00000182527 CDK11BP21127 795 aaKnown RBP10.08□□□□□ -0.8
TRAM2-201ENST00000182527 PDE3BQ13370 1112 aa10.08□□□□□ -0.8
TRAM2-201ENST00000182527 GTF2E1P29083 439 aaPredicted RBP10.08□□□□□ -0.8
TRAM2-201ENST00000182527 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
TRAM2-201ENST00000182527 HNRNPMP52272 730 aaKnown RBP eCLIP10.07□□□□□ -0.81e-6■■■□□ 18.9
TRAM2-201ENST00000182527 CHIC2Q9UKJ5 165 aa10.07□□□□□ -0.8
TRAM2-201ENST00000182527 WDHD1O75717 1129 aaPredicted RBP10.07□□□□□ -0.8
TRAM2-201ENST00000182527 NGDNQ8NEJ9 315 aaKnown RBP10.07□□□□□ -0.8
TRAM2-201ENST00000182527 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
TRAM2-201ENST00000182527 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
TRAM2-201ENST00000182527 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAM2-201ENST00000182527 ZNF330Q9Y3S2 320 aaPredicted RBP10.06□□□□□ -0.8
TRAM2-201ENST00000182527 PSME1Q06323 249 aa10.05□□□□□ -0.8
TRAM2-201ENST00000182527 PPP6R1Q9UPN7 881 aa10.05□□□□□ -0.8
TRAM2-201ENST00000182527 TMC1Q8TDI8 760 aa10.05□□□□□ -0.8
TRAM2-201ENST00000182527 LMTK3Q96Q04 1460 aa10.05□□□□□ -0.8
TRAM2-201ENST00000182527 CCNB3Q8WWL7 1395 aa10.05□□□□□ -0.8
TRAM2-201ENST00000182527 KIF3BO15066 747 aa10.03□□□□□ -0.8
TRAM2-201ENST00000182527 SOX12O15370 315 aa10.03□□□□□ -0.8
TRAM2-201ENST00000182527 ZCCHC6Q5VYS8 1495 aaKnown RBP10.01□□□□□ -0.81
TRAM2-201ENST00000182527 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
TRAM2-201ENST00000182527 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
TRAM2-201ENST00000182527 POLD1P28340 1107 aa10.01□□□□□ -0.81
TRAM2-201ENST00000182527 NEUROD1Q13562 356 aa10.01□□□□□ -0.81
TRAM2-201ENST00000182527 PPM1GO15355 546 aaPredicted RBP10.01□□□□□ -0.81
TRAM2-201ENST00000182527 CCAR1Q8IX12 1150 aaKnown RBP10□□□□□ -0.81
TRAM2-201ENST00000182527 SYTL4Q96C24 671 aaPredicted RBP10□□□□□ -0.81
TRAM2-201ENST00000182527 IL27Q8NEV9 243 aa9.98□□□□□ -0.81
TRAM2-201ENST00000182527 CNKSR2Q8WXI2 1034 aa9.98□□□□□ -0.81
TRAM2-201ENST00000182527 KDM2AQ9Y2K7 1162 aa9.98□□□□□ -0.81
TRAM2-201ENST00000182527 STK26Q9P289 416 aa9.97□□□□□ -0.81
TRAM2-201ENST00000182527 GOLGA3Q08378 1498 aa9.97□□□□□ -0.81
TRAM2-201ENST00000182527 MYO15BQ96JP2 1530 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms