RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 KDM2AQ9Y2K7 1162 aa22.9■■□□□ 1.26
KDM4B-201ENST00000159111 RRP7BPQ9NSQ0 103 aa22.89■■□□□ 1.26
KDM4B-201ENST00000159111 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.25
KDM4B-201ENST00000159111 MIER1Q8N108 512 aa22.86■■□□□ 1.25
KDM4B-201ENST00000159111 CCDC136Q96JN2 1154 aa22.84■■□□□ 1.25
KDM4B-201ENST00000159111 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
KDM4B-201ENST00000159111 CECR2Q9BXF3 1484 aa22.78■■□□□ 1.24
KDM4B-201ENST00000159111 HSP90AA1P07900 732 aaKnown RBP22.76■■□□□ 1.23
KDM4B-201ENST00000159111 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
KDM4B-201ENST00000159111 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
KDM4B-201ENST00000159111 ANP32BQ92688 251 aaKnown RBP22.73■■□□□ 1.23
KDM4B-201ENST00000159111 HIRIP3Q9BW71 556 aaPredicted RBP22.7■■□□□ 1.22
KDM4B-201ENST00000159111 KCNH8Q96L42 1107 aa22.69■■□□□ 1.22
KDM4B-201ENST00000159111 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
KDM4B-201ENST00000159111 PLPPR3Q6T4P5 718 aa22.67■■□□□ 1.22
KDM4B-201ENST00000159111 ERCC6Q03468 1493 aa22.63■■□□□ 1.21
KDM4B-201ENST00000159111 CARMIL1Q5VZK9 1371 aa22.62■■□□□ 1.21
KDM4B-201ENST00000159111 CCNB3Q8WWL7 1395 aa22.61■■□□□ 1.21
KDM4B-201ENST00000159111 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
KDM4B-201ENST00000159111 CUX2O14529 1486 aa22.61■■□□□ 1.21
KDM4B-201ENST00000159111 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
KDM4B-201ENST00000159111 SOGA1O94964 1423 aa22.59■■□□□ 1.21
KDM4B-201ENST00000159111 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
KDM4B-201ENST00000159111 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
KDM4B-201ENST00000159111 MYH16Q9H6N6 1097 aa22.58■■□□□ 1.21
KDM4B-201ENST00000159111 PPP1R15AO75807 674 aaPredicted RBP22.57■■□□□ 1.2
KDM4B-201ENST00000159111 CARD11Q9BXL7 1154 aa22.55■■□□□ 1.2
KDM4B-201ENST00000159111 RGL3Q3MIN7 710 aa22.55■■□□□ 1.2
KDM4B-201ENST00000159111 CFAP53Q96M91 514 aa22.54■■□□□ 1.2
KDM4B-201ENST00000159111 EIF4G1Q04637 1599 aaKnown RBP22.53■■□□□ 1.2
KDM4B-201ENST00000159111 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
KDM4B-201ENST00000159111 VPS8Q8N3P4 1428 aa22.52■■□□□ 1.2
KDM4B-201ENST00000159111 IRX6P78412 446 aaPredicted RBP22.52■■□□□ 1.19
KDM4B-201ENST00000159111 TIMELESSQ9UNS1 1208 aa22.52■■□□□ 1.19
KDM4B-201ENST00000159111 DDRGK1Q96HY6 314 aa22.48■■□□□ 1.19
KDM4B-201ENST00000159111 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
KDM4B-201ENST00000159111 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
KDM4B-201ENST00000159111 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
KDM4B-201ENST00000159111 SIN3AQ96ST3 1273 aa22.44■■□□□ 1.18
KDM4B-201ENST00000159111 EIF5BO60841 1220 aaKnown RBP22.43■■□□□ 1.18
KDM4B-201ENST00000159111 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
KDM4B-201ENST00000159111 BECN1Q14457 450 aa22.4■■□□□ 1.18
KDM4B-201ENST00000159111 NBR1Q14596 966 aa22.39■■□□□ 1.17
KDM4B-201ENST00000159111 KANK1Q14678 1352 aa22.36■■□□□ 1.17
KDM4B-201ENST00000159111 PDS5BQ9NTI5 1447 aa22.35■■□□□ 1.17
KDM4B-201ENST00000159111 FMN1Q68DA7 1419 aa22.32■■□□□ 1.16
KDM4B-201ENST00000159111 WIZO95785 1651 aa22.32■■□□□ 1.16
KDM4B-201ENST00000159111 SUPT16HQ9Y5B9 1047 aaKnown RBP22.32■■□□□ 1.16
KDM4B-201ENST00000159111 C14orf37Q86TY3 774 aa22.31■■□□□ 1.16
KDM4B-201ENST00000159111 NUDCQ9Y266 331 aa22.31■■□□□ 1.16
KDM4B-201ENST00000159111 CARMIL2Q6F5E8 1435 aa22.3■■□□□ 1.16
KDM4B-201ENST00000159111 TMF1P82094 1093 aa22.29■■□□□ 1.16
KDM4B-201ENST00000159111 ARID4BQ4LE39 1312 aaPredicted RBP22.29■■□□□ 1.16
KDM4B-201ENST00000159111 MAPK8IP3Q9UPT6 1336 aa22.29■■□□□ 1.16
KDM4B-201ENST00000159111 PPP4R2Q9NY27 417 aa22.28■■□□□ 1.16
KDM4B-201ENST00000159111 ZBTB7CA1YPR0 619 aa22.28■■□□□ 1.16
KDM4B-201ENST00000159111 CCER2I3L3R5 266 aa22.26■■□□□ 1.15
KDM4B-201ENST00000159111 ANP32EQ9BTT0 268 aa22.26■■□□□ 1.15
KDM4B-201ENST00000159111 SENP3Q9H4L4 574 aaPredicted RBP22.26■■□□□ 1.15
KDM4B-201ENST00000159111 POGKQ9P215 609 aa22.26■■□□□ 1.15
KDM4B-201ENST00000159111 FTSJ3Q8IY81 847 aaKnown RBP22.26■■□□□ 1.15
KDM4B-201ENST00000159111 DCAF11Q8TEB1 546 aa22.23■■□□□ 1.15
KDM4B-201ENST00000159111 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
KDM4B-201ENST00000159111 GLIPR1L2Q4G1C9 344 aa22.22■■□□□ 1.15
KDM4B-201ENST00000159111 CASC1Q6TDU7 716 aa22.22■■□□□ 1.15
KDM4B-201ENST00000159111 CHMP4BQ9H444 224 aaKnown RBP22.21■■□□□ 1.15
KDM4B-201ENST00000159111 MS4A1P11836 297 aa22.2■■□□□ 1.14
KDM4B-201ENST00000159111 KANK4Q5T7N3 995 aaPredicted RBP22.2■■□□□ 1.14
KDM4B-201ENST00000159111 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
KDM4B-201ENST00000159111 CC2D1BQ5T0F9 858 aaKnown RBP22.19■■□□□ 1.14
KDM4B-201ENST00000159111 GOLGA6L22H0YM25 854 aa22.18■■□□□ 1.14
KDM4B-201ENST00000159111 RAPGEF2Q9Y4G8 1499 aa22.18■■□□□ 1.14
KDM4B-201ENST00000159111 NCLP19338 710 aaKnown RBP22.17■■□□□ 1.14
KDM4B-201ENST00000159111 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
KDM4B-201ENST00000159111 HSPA5P11021 654 aaKnown RBP22.14■■□□□ 1.14
KDM4B-201ENST00000159111 SMARCA4P51532 1647 aa22.14■■□□□ 1.13
KDM4B-201ENST00000159111 HDGFP51858 240 aaKnown RBP22.13■■□□□ 1.13
KDM4B-201ENST00000159111 NEUROD2Q15784 382 aa22.12■■□□□ 1.13
KDM4B-201ENST00000159111 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
KDM4B-201ENST00000159111 ANKRD30AQ9BXX3 1397 aa22.11■■□□□ 1.13
KDM4B-201ENST00000159111 PKD2Q13563 968 aa22.11■■□□□ 1.13
KDM4B-201ENST00000159111 ARXQ96QS3 562 aa22.11■■□□□ 1.13
KDM4B-201ENST00000159111 LAS1LQ9Y4W2 734 aaKnown RBP22.09■■□□□ 1.13
KDM4B-201ENST00000159111 TDRD9Q8NDG6 1382 aaKnown RBP22.09■■□□□ 1.13
KDM4B-201ENST00000159111 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.13
KDM4B-201ENST00000159111 A0A0G2JS52 829 aa22.07■■□□□ 1.12
KDM4B-201ENST00000159111 ATAD2BQ9ULI0 1458 aa22.07■■□□□ 1.12
KDM4B-201ENST00000159111 KTN1Q86UP2 1357 aaKnown RBP22.07■■□□□ 1.12
KDM4B-201ENST00000159111 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
KDM4B-201ENST00000159111 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
KDM4B-201ENST00000159111 PLEKHG5O94827 1062 aa22.06■■□□□ 1.12
KDM4B-201ENST00000159111 FRAT1Q92837 279 aaPredicted RBP22.05■■□□□ 1.12
KDM4B-201ENST00000159111 TNNT2P45379 298 aaPredicted RBP22.04■■□□□ 1.12
KDM4B-201ENST00000159111 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
KDM4B-201ENST00000159111 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
KDM4B-201ENST00000159111 MORC1Q86VD1 984 aa22.01■■□□□ 1.11
KDM4B-201ENST00000159111 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
KDM4B-201ENST00000159111 TRIM44Q96DX7 344 aaPredicted RBP22.01■■□□□ 1.11
KDM4B-201ENST00000159111 NUP155O75694 1391 aa22■■□□□ 1.11
KDM4B-201ENST00000159111 EFCAB2Q5VUJ9 269 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms