RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Kif15Q6P9L6 1387 aa19.43■□□□□ 0.7
Clcn4-203ENSMUST00000210061 Hnrnpul2Q00PI9 745 aaKnown RBP19.42■□□□□ 0.7
Clcn4-203ENSMUST00000210061 Erich3F6QRE9 1637 aa19.41■□□□□ 0.7
Clcn4-203ENSMUST00000210061 BlmO88700 1416 aa19.4■□□□□ 0.7
Clcn4-203ENSMUST00000210061 Mroh2bQ7M6Y6 1581 aa19.38■□□□□ 0.69
Clcn4-203ENSMUST00000210061 AqrQ8CFQ3 1481 aaKnown RBP19.38■□□□□ 0.69
Clcn4-203ENSMUST00000210061 Ankrd26Q811D2 1581 aa19.37■□□□□ 0.69
Clcn4-203ENSMUST00000210061 Grin2bQ01097 1482 aa19.35■□□□□ 0.69
Clcn4-203ENSMUST00000210061 Rpap1Q80TE0 1409 aa19.34■□□□□ 0.69
Clcn4-203ENSMUST00000210061 Pcf11G3X9Z4 1553 aa19.32■□□□□ 0.68
Clcn4-203ENSMUST00000210061 Slx4Q6P1D7 1565 aa19.31■□□□□ 0.68
Clcn4-203ENSMUST00000210061 SafbD3YXK2 937 aaKnown RBP19.3■□□□□ 0.68
Clcn4-203ENSMUST00000210061 UacaQ8CGB3 1411 aa19.29■□□□□ 0.68
Clcn4-203ENSMUST00000210061 NclP09405 707 aaKnown RBP19.28■□□□□ 0.68
Clcn4-203ENSMUST00000210061 Fam50aQ9WV03 339 aaKnown RBP19.28■□□□□ 0.68
Clcn4-203ENSMUST00000210061 Mapk8ip2Q9ERE9 830 aa19.26■□□□□ 0.67
Clcn4-203ENSMUST00000210061 Stra8P70278 393 aa19.25■□□□□ 0.67
Clcn4-203ENSMUST00000210061 Znf710Q3U288 666 aa19.24■□□□□ 0.67
Clcn4-203ENSMUST00000210061 CntlnA2AM05 1397 aa19.23■□□□□ 0.67
Clcn4-203ENSMUST00000210061 Lmo7E9PYF4 1699 aaKnown RBP19.23■□□□□ 0.67
Clcn4-203ENSMUST00000210061 Unc13aQ4KUS2 1712 aa19.23■□□□□ 0.67
Clcn4-203ENSMUST00000210061 Ankrd36D3Z4K0 1415 aa19.23■□□□□ 0.67
Clcn4-203ENSMUST00000210061 3425401B19RikD3Z1D3 1412 aa19.22■□□□□ 0.67
Clcn4-203ENSMUST00000210061 Fhad1A6PWD2 1420 aa19.21■□□□□ 0.67
Clcn4-203ENSMUST00000210061 Ercc6F8VPZ5 1481 aa19.21■□□□□ 0.67
Clcn4-203ENSMUST00000210061 Fam71e1A1L3C1 212 aa19.2■□□□□ 0.66
Clcn4-203ENSMUST00000210061 Ccer2J3QPU5 274 aa19.2■□□□□ 0.66
Clcn4-203ENSMUST00000210061 Gm13697A2AK42 830 aa19.19■□□□□ 0.66
Clcn4-203ENSMUST00000210061 Mia2Q91ZV0 1396 aa19.18■□□□□ 0.66
Clcn4-203ENSMUST00000210061 Lmod2Q3UHZ5 550 aa19.17■□□□□ 0.66
Clcn4-203ENSMUST00000210061 Fyco1Q8VDC1 1437 aa19.17■□□□□ 0.66
Clcn4-203ENSMUST00000210061 Carmil1Q6EDY6 1374 aa19.16■□□□□ 0.66
Clcn4-203ENSMUST00000210061 Hspa5P20029 655 aaKnown RBP19.15■□□□□ 0.66
Clcn4-203ENSMUST00000210061 Cux1P53564 1515 aa19.15■□□□□ 0.66
Clcn4-203ENSMUST00000210061 Vps8Q0P5W1 1427 aa19.14■□□□□ 0.65
Clcn4-203ENSMUST00000210061 Dhx29Q6PGC1 1365 aaKnown RBP19.14■□□□□ 0.65
Clcn4-203ENSMUST00000210061 Peg3Q3URU2 1571 aa19.13■□□□□ 0.65
Clcn4-203ENSMUST00000210061 Efcab5A0JP43 1406 aa19.09■□□□□ 0.65
Clcn4-203ENSMUST00000210061 Camsap2Q8C1B1 1461 aa19.07■□□□□ 0.64
Clcn4-203ENSMUST00000210061 Urb2E9Q7L1 1524 aaKnown RBP19.07■□□□□ 0.64
Clcn4-203ENSMUST00000210061 Naip2Q9QUK4 1447 aa19.07■□□□□ 0.64
Clcn4-203ENSMUST00000210061 Crocc2F6XLV1 1638 aa19.05■□□□□ 0.64
Clcn4-203ENSMUST00000210061 Anp32aO35381 247 aa19.05■□□□□ 0.64
Clcn4-203ENSMUST00000210061 Ube2uB1AUC4 352 aa19.03■□□□□ 0.64
Clcn4-203ENSMUST00000210061 Gm7298A0A0N4SVU1 1476 aa19.02■□□□□ 0.64
Clcn4-203ENSMUST00000210061 Gm1043A0A140LJC2 1431 aa19.01■□□□□ 0.63
Clcn4-203ENSMUST00000210061 Cux2P70298 1426 aa19.01■□□□□ 0.63
Clcn4-203ENSMUST00000210061 Aebp1Q640N1 1128 aa19■□□□□ 0.63
Clcn4-203ENSMUST00000210061 Smg6P61406 1418 aaKnown RBP18.98■□□□□ 0.63
Clcn4-203ENSMUST00000210061 Ncoa2Q61026 1462 aa18.97■□□□□ 0.63
Clcn4-203ENSMUST00000210061 Naip5Q9R016 1403 aa18.97■□□□□ 0.63
Clcn4-203ENSMUST00000210061 LrpprcQ6PB66 1392 aaKnown RBP18.97■□□□□ 0.63
Clcn4-203ENSMUST00000210061 Npm1Q61937 292 aaKnown RBP18.97■□□□□ 0.63
Clcn4-203ENSMUST00000210061 Calr4Q3TQS0 420 aa18.96■□□□□ 0.63
Clcn4-203ENSMUST00000210061 PogzQ8BZH4 1409 aaKnown RBP18.96■□□□□ 0.63
Clcn4-203ENSMUST00000210061 Duox2A2AQ99 1517 aa18.96■□□□□ 0.63
Clcn4-203ENSMUST00000210061 A2mQ6GQT1 1474 aa18.95■□□□□ 0.62
Clcn4-203ENSMUST00000210061 Phldb1Q6PDH0 1371 aaKnown RBP18.94■□□□□ 0.62
Clcn4-203ENSMUST00000210061 Sin3aQ60520 1274 aaKnown RBP18.92■□□□□ 0.62
Clcn4-203ENSMUST00000210061 Dennd4bQ3U1Y4 1499 aa18.91■□□□□ 0.62
Clcn4-203ENSMUST00000210061 SynmQ70IV5 1561 aa18.91■□□□□ 0.62
Clcn4-203ENSMUST00000210061 Polr1aO35134 1717 aaKnown RBP18.91■□□□□ 0.62
Clcn4-203ENSMUST00000210061 Cul7Q8VE73 1689 aa18.91■□□□□ 0.62
Clcn4-203ENSMUST00000210061 Fhod3Q76LL6 1578 aa18.86■□□□□ 0.61
Clcn4-203ENSMUST00000210061 Ccnb3Q810T2 1396 aa18.86■□□□□ 0.61
Clcn4-203ENSMUST00000210061 Nolc1E9Q5C9 702 aaKnown RBP18.85■□□□□ 0.61
Clcn4-203ENSMUST00000210061 Lmtk2Q3TYD6 1471 aa18.84■□□□□ 0.61
Clcn4-203ENSMUST00000210061 Samd9lQ69Z37 1561 aa18.83■□□□□ 0.61
Clcn4-203ENSMUST00000210061 Chic2Q9D9G3 165 aa18.83■□□□□ 0.61
Clcn4-203ENSMUST00000210061 Ubl4bQ9CQ84 188 aa18.83■□□□□ 0.6
Clcn4-203ENSMUST00000210061 Slc24a1Q91WD8 1130 aa18.81■□□□□ 0.6
Clcn4-203ENSMUST00000210061 Pprc1Q6NZN1 1644 aa18.79■□□□□ 0.6
Clcn4-203ENSMUST00000210061 Thoc2B1AZI6 1594 aaKnown RBP18.78■□□□□ 0.6
Clcn4-203ENSMUST00000210061 Rtl5Q5DTT4 599 aa18.78■□□□□ 0.6
Clcn4-203ENSMUST00000210061 Washc2Q6PGL7 1334 aa18.78■□□□□ 0.6
Clcn4-203ENSMUST00000210061 Rad54l2Q99NG0 1466 aa18.76■□□□□ 0.59
Clcn4-203ENSMUST00000210061 Mphosph9A6H5Y1 991 aa18.75■□□□□ 0.59
Clcn4-203ENSMUST00000210061 Setbp1Q9Z180 1582 aa18.74■□□□□ 0.59
Clcn4-203ENSMUST00000210061 Ncoa1P70365 1447 aa18.71■□□□□ 0.59
Clcn4-203ENSMUST00000210061 EprsQ8CGC7 1512 aaKnown RBP18.71■□□□□ 0.59
Clcn4-203ENSMUST00000210061 Gpatch8A2A6A1 1505 aa18.71■□□□□ 0.59
Clcn4-203ENSMUST00000210061 Supt16hQ920B9 1047 aa18.71■□□□□ 0.59
Clcn4-203ENSMUST00000210061 Gcc2Q8CHG3 1679 aa18.7■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Rfx7F8VPJ6 1459 aa18.69■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Kif21aQ9QXL2 1672 aa18.69■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Kif27Q7M6Z4 1394 aa18.69■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Mrs2Q5NCE8 434 aa18.69■□□□□ 0.58
Clcn4-203ENSMUST00000210061 CadpsQ80TJ1 1355 aa18.68■□□□□ 0.58
Clcn4-203ENSMUST00000210061 NexmifQ5DTT1 1515 aa18.67■□□□□ 0.58
Clcn4-203ENSMUST00000210061 DiexfQ8BTT6 772 aaKnown RBP18.67■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Gm13695A2AK44 830 aa18.66■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Wdr43Q6ZQL4 677 aaKnown RBP18.66■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Bcl11aQ9QYE3 773 aa18.66■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Abca5Q8K448 1642 aa18.66■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Pelp1Q9DBD5 1123 aaKnown RBP18.65■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Usp47Q8BY87 1376 aa18.65■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Mug1P28665 1476 aa18.65■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Slc4a2P13808 1237 aaKnown RBP18.64■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Eif5bQ05D44 1216 aaKnown RBP18.64■□□□□ 0.58
Clcn4-203ENSMUST00000210061 Ppp4r2Q0VGB7 417 aa18.64■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms