RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 Plcd4Q8K3R3 807 aa10.16□□□□□ -0.78
Nck1-201ENSMUST00000112874 AcrbpQ3V140 540 aa10.14□□□□□ -0.79
Nck1-201ENSMUST00000112874 Rtn4Q99P72 1162 aaKnown RBP10.12□□□□□ -0.79
Nck1-201ENSMUST00000112874 Nkx1-1G3UXB3 402 aa10.09□□□□□ -0.79
Nck1-201ENSMUST00000112874 Irx6Q9ER75 438 aa10.09□□□□□ -0.79
Nck1-201ENSMUST00000112874 NefmP08553 848 aa10.08□□□□□ -0.8
Nck1-201ENSMUST00000112874 Krtap28-13A0A087WQP5 138 aa10.07□□□□□ -0.8
Nck1-201ENSMUST00000112874 Gm38655A0A286YDK6 273 aa10.07□□□□□ -0.8
Nck1-201ENSMUST00000112874 Pde4cQ3UEI1 686 aa10.07□□□□□ -0.8
Nck1-201ENSMUST00000112874 Kank3Q9Z1P7 791 aa10.07□□□□□ -0.8
Nck1-201ENSMUST00000112874 Arid4bA2CG63 1314 aaKnown RBP10.07□□□□□ -0.8
Nck1-201ENSMUST00000112874 Samd1D3YXK1 519 aa10.07□□□□□ -0.8
Nck1-201ENSMUST00000112874 Clcn6O35454 870 aa10.07□□□□□ -0.8
Nck1-201ENSMUST00000112874 Gtf3c3Q3TMP1 882 aa10.07□□□□□ -0.8
Nck1-201ENSMUST00000112874 Rangap1P46061 589 aaKnown RBP10.05□□□□□ -0.8
Nck1-201ENSMUST00000112874 Cers3Q1A3B0 383 aa10.05□□□□□ -0.8
Nck1-201ENSMUST00000112874 Gm11555B1AQ89 175 aa10.02□□□□□ -0.81
Nck1-201ENSMUST00000112874 Tshz2Q68FE9 1030 aa9.99□□□□□ -0.81
Nck1-201ENSMUST00000112874 Zbtb12Q9Z150 459 aa9.98□□□□□ -0.81
Nck1-201ENSMUST00000112874 Gtpbp6Q3U6U5 514 aa9.96□□□□□ -0.82
Nck1-201ENSMUST00000112874 Esf1Q3V1V3 845 aaKnown RBP9.95□□□□□ -0.82
Nck1-201ENSMUST00000112874 Cdca7Q9D0M2 382 aa9.93□□□□□ -0.82
Nck1-201ENSMUST00000112874 Gm13697A2AK42 830 aa9.92□□□□□ -0.82
Nck1-201ENSMUST00000112874 Skap1Q3UUV5 355 aa9.91□□□□□ -0.82
Nck1-201ENSMUST00000112874 Gpatch11Q3UFS4 262 aa9.89□□□□□ -0.83
Nck1-201ENSMUST00000112874 HomezQ80W88 542 aa9.89□□□□□ -0.83
Nck1-201ENSMUST00000112874 Lhx8O35652 367 aa9.88□□□□□ -0.83
Nck1-201ENSMUST00000112874 Foxp4Q9DBY0 795 aaKnown RBP9.88□□□□□ -0.83
Nck1-201ENSMUST00000112874 Hsp90b1P08113 802 aaKnown RBP9.87□□□□□ -0.83
Nck1-201ENSMUST00000112874 Rad21Q61550 635 aaKnown RBP9.86□□□□□ -0.83
Nck1-201ENSMUST00000112874 Anp32bQ9EST5 272 aaKnown RBP9.86□□□□□ -0.83
Nck1-201ENSMUST00000112874 A030005K14RikA0A1Y7VNY1 122 aa9.84□□□□□ -0.83
Nck1-201ENSMUST00000112874 Pitpnm1O35954 1243 aa9.84□□□□□ -0.83
Nck1-201ENSMUST00000112874 Ciz1Q8VEH2 845 aa9.84□□□□□ -0.83
Nck1-201ENSMUST00000112874 ArntlQ9WTL8 632 aa9.84□□□□□ -0.83
Nck1-201ENSMUST00000112874 Brd2Q7JJ13 798 aaKnown RBP9.82□□□□□ -0.84
Nck1-201ENSMUST00000112874 Nlrp6Q91WS2 869 aa9.82□□□□□ -0.84
Nck1-201ENSMUST00000112874 Stag3O70576 1240 aa9.81□□□□□ -0.84
Nck1-201ENSMUST00000112874 Kiaa1211Q5PR69 1207 aa9.81□□□□□ -0.84
Nck1-201ENSMUST00000112874 Hmgb1P63158 215 aaKnown RBP9.8□□□□□ -0.84
Nck1-201ENSMUST00000112874 Irx3P81067 507 aa9.8□□□□□ -0.84
Nck1-201ENSMUST00000112874 Npm1Q61937 292 aaKnown RBP9.8□□□□□ -0.84
Nck1-201ENSMUST00000112874 Trim35Q8C006 501 aa9.79□□□□□ -0.84
Nck1-201ENSMUST00000112874 Gm11563B1AQ90 168 aa9.78□□□□□ -0.84
Nck1-201ENSMUST00000112874 Krtap4-7Q9D732 168 aa9.78□□□□□ -0.84
Nck1-201ENSMUST00000112874 Supt5hO55201 1082 aaKnown RBP9.77□□□□□ -0.85
Nck1-201ENSMUST00000112874 Wdr66E9Q743 1299 aa9.76□□□□□ -0.85
Nck1-201ENSMUST00000112874 DaxxO35613 739 aa9.75□□□□□ -0.85
Nck1-201ENSMUST00000112874 MyclP10166 368 aa9.75□□□□□ -0.85
Nck1-201ENSMUST00000112874 Anks4bQ8K3X6 423 aa9.74□□□□□ -0.85
Nck1-201ENSMUST00000112874 Gtf3c6Q9D8P7 227 aa9.74□□□□□ -0.85
Nck1-201ENSMUST00000112874 Ccdc136Q3TVA9 1136 aa9.73□□□□□ -0.85
Nck1-201ENSMUST00000112874 Znf692Q3U381 531 aa9.72□□□□□ -0.85
Nck1-201ENSMUST00000112874 Podxl2Q8CAE9 603 aa9.72□□□□□ -0.85
Nck1-201ENSMUST00000112874 Styxl1Q9DAR2 321 aa9.71□□□□□ -0.86
Nck1-201ENSMUST00000112874 Zfp777B9EKF4 885 aa9.67□□□□□ -0.86
Nck1-201ENSMUST00000112874 Hs1bp3Q3TC93 395 aa9.66□□□□□ -0.86
Nck1-201ENSMUST00000112874 C1qtnf12Q8R2Z0 308 aa9.66□□□□□ -0.86
Nck1-201ENSMUST00000112874 Plcd3Q8K2J0 785 aa9.63□□□□□ -0.87
Nck1-201ENSMUST00000112874 PtmaP26350 111 aa9.62□□□□□ -0.87
Nck1-201ENSMUST00000112874 ErmnQ5EBJ4 281 aa9.62□□□□□ -0.87
Nck1-201ENSMUST00000112874 Prm3Q62100 101 aa9.62□□□□□ -0.87
Nck1-201ENSMUST00000112874 Stard8Q8K031 1019 aa9.62□□□□□ -0.87
Nck1-201ENSMUST00000112874 Tmem132aQ922P8 1018 aa9.62□□□□□ -0.87
Nck1-201ENSMUST00000112874 Ubap1lG3UW59 384 aa9.61□□□□□ -0.87
Nck1-201ENSMUST00000112874 Hdac5Q9Z2V6 1113 aa9.6□□□□□ -0.87
Nck1-201ENSMUST00000112874 1700019A02RikA0A087WPV9 146 aa9.59□□□□□ -0.87
Nck1-201ENSMUST00000112874 Rbm10Q99KG3 930 aaKnown RBP9.59□□□□□ -0.87
Nck1-201ENSMUST00000112874 Zfp91Q62511 572 aa9.57□□□□□ -0.88
Nck1-201ENSMUST00000112874 Noc3lQ8VI84 807 aaKnown RBP9.57□□□□□ -0.88
Nck1-201ENSMUST00000112874 Tmed8Q3UHI4 326 aa9.56□□□□□ -0.88
Nck1-201ENSMUST00000112874 Ms4a5Q810P8 197 aa9.56□□□□□ -0.88
Nck1-201ENSMUST00000112874 Psmd1Q3TXS7 953 aa9.55□□□□□ -0.88
Nck1-201ENSMUST00000112874 Zbtb38Q3LR78 1197 aa9.54□□□□□ -0.88
Nck1-201ENSMUST00000112874 BbxQ8VBW5 907 aa9.54□□□□□ -0.88
Nck1-201ENSMUST00000112874 Fam50aQ9WV03 339 aaKnown RBP9.54□□□□□ -0.88
Nck1-201ENSMUST00000112874 A030005L19RikA0A1Y7VIU2 113 aa9.5□□□□□ -0.89
Nck1-201ENSMUST00000112874 Sh3bp1P55194 680 aa9.49□□□□□ -0.89
Nck1-201ENSMUST00000112874 B4galnt3Q6L8S8 986 aa9.49□□□□□ -0.89
Nck1-201ENSMUST00000112874 Zcwpw1Q6IR42 630 aa9.47□□□□□ -0.89
Nck1-201ENSMUST00000112874 Ppp6r1Q7TSI3 856 aa9.46□□□□□ -0.89
Nck1-201ENSMUST00000112874 Ccdc9Q8VC31 543 aaKnown RBP9.46□□□□□ -0.89
Nck1-201ENSMUST00000112874 Gm13695A2AK44 830 aa9.46□□□□□ -0.9
Nck1-201ENSMUST00000112874 Mak16Q8BGS0 296 aaKnown RBP9.46□□□□□ -0.9
Nck1-201ENSMUST00000112874 Kdm2aP59997 1161 aa9.45□□□□□ -0.9
Nck1-201ENSMUST00000112874 Rtl5Q5DTT4 599 aa9.45□□□□□ -0.9
Nck1-201ENSMUST00000112874 Riok3Q9DBU3 519 aaKnown RBP9.45□□□□□ -0.9
Nck1-201ENSMUST00000112874 Trim26Q99PN3 545 aa9.44□□□□□ -0.9
Nck1-201ENSMUST00000112874 Fxr2Q9WVR4 673 aaKnown RBP9.44□□□□□ -0.9
Nck1-201ENSMUST00000112874 Dnajc5P60904 198 aa9.43□□□□□ -0.9
Nck1-201ENSMUST00000112874 Rbm25B2RY56 838 aaKnown RBP9.42□□□□□ -0.9
Nck1-201ENSMUST00000112874 Vgll3P85442 326 aa9.42□□□□□ -0.9
Nck1-201ENSMUST00000112874 Ppp1r18Q8BQ30 594 aa9.41□□□□□ -0.9
Nck1-201ENSMUST00000112874 TraipQ8VIG6 470 aa9.41□□□□□ -0.9
Nck1-201ENSMUST00000112874 DekQ7TNV0 380 aaKnown RBP9.4□□□□□ -0.91
Nck1-201ENSMUST00000112874 Brpf1B2RRD7 1212 aa9.39□□□□□ -0.91
Nck1-201ENSMUST00000112874 Irf5P56477 497 aa9.39□□□□□ -0.91
Nck1-201ENSMUST00000112874 Chrm1P12657 460 aa9.38□□□□□ -0.91
Nck1-201ENSMUST00000112874 Wwc1Q5SXA9 1104 aa9.38□□□□□ -0.91
Nck1-201ENSMUST00000112874 Skida1Q80YR3 822 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 59.9 ms