RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Pcf11G3X9Z4 1553 aa23.08■■□□□ 1.29
Vcan-201ENSMUST00000109543 Cux1P53564 1515 aa23.05■■□□□ 1.28
Vcan-201ENSMUST00000109543 BlmO88700 1416 aa23.04■■□□□ 1.28
Vcan-201ENSMUST00000109543 TonslQ6NZL6 1363 aa23.04■■□□□ 1.28
Vcan-201ENSMUST00000109543 Dhx29Q6PGC1 1365 aaKnown RBP23.03■■□□□ 1.28
Vcan-201ENSMUST00000109543 Aebp2Q9Z248 504 aaKnown RBP23.03■■□□□ 1.28
Vcan-201ENSMUST00000109543 Samd9lQ69Z37 1561 aa23.01■■□□□ 1.27
Vcan-201ENSMUST00000109543 Slx4Q6P1D7 1565 aa23.01■■□□□ 1.27
Vcan-201ENSMUST00000109543 Wdr66E9Q743 1299 aa23.01■■□□□ 1.27
Vcan-201ENSMUST00000109543 Lmo7E9PYF4 1699 aaKnown RBP23■■□□□ 1.27
Vcan-201ENSMUST00000109543 SynmQ70IV5 1561 aa22.99■■□□□ 1.27
Vcan-201ENSMUST00000109543 Kdm5bQ80Y84 1544 aa22.95■■□□□ 1.26
Vcan-201ENSMUST00000109543 CntlnA2AM05 1397 aa22.93■■□□□ 1.26
Vcan-201ENSMUST00000109543 Urb2E9Q7L1 1524 aaKnown RBP22.93■■□□□ 1.26
Vcan-201ENSMUST00000109543 Rad54l2Q99NG0 1466 aa22.91■■□□□ 1.26
Vcan-201ENSMUST00000109543 Fyco1Q8VDC1 1437 aa22.9■■□□□ 1.26
Vcan-201ENSMUST00000109543 Lmod2Q3UHZ5 550 aa22.9■■□□□ 1.26
Vcan-201ENSMUST00000109543 Crocc2F6XLV1 1638 aa22.89■■□□□ 1.25
Vcan-201ENSMUST00000109543 TchhA0A0B4J1F9 1599 aa22.88■■□□□ 1.25
Vcan-201ENSMUST00000109543 Kif21aQ9QXL2 1672 aa22.88■■□□□ 1.25
Vcan-201ENSMUST00000109543 Mrc2Q64449 1479 aa22.85■■□□□ 1.25
Vcan-201ENSMUST00000109543 ClspnQ80YR7 1315 aa22.85■■□□□ 1.25
Vcan-201ENSMUST00000109543 Polr1aO35134 1717 aaKnown RBP22.85■■□□□ 1.25
Vcan-201ENSMUST00000109543 Peg3Q3URU2 1571 aa22.82■■□□□ 1.24
Vcan-201ENSMUST00000109543 Neurod1Q60867 357 aa22.82■■□□□ 1.24
Vcan-201ENSMUST00000109543 Aebp1Q640N1 1128 aa22.81■■□□□ 1.24
Vcan-201ENSMUST00000109543 Eid3Q3V124 375 aa22.8■■□□□ 1.24
Vcan-201ENSMUST00000109543 Rpap1Q80TE0 1409 aa22.79■■□□□ 1.24
Vcan-201ENSMUST00000109543 Dnajc5bQ9CQ94 199 aa22.75■■□□□ 1.23
Vcan-201ENSMUST00000109543 Fam50aQ9WV03 339 aaKnown RBP22.75■■□□□ 1.23
Vcan-201ENSMUST00000109543 3425401B19RikD3Z1D3 1412 aa22.74■■□□□ 1.23
Vcan-201ENSMUST00000109543 Pla2r1Q62028 1487 aa22.74■■□□□ 1.23
Vcan-201ENSMUST00000109543 Ppargc1bQ8VHJ7 1014 aa22.74■■□□□ 1.23
Vcan-201ENSMUST00000109543 EprsQ8CGC7 1512 aaKnown RBP22.73■■□□□ 1.23
Vcan-201ENSMUST00000109543 Gm1043A0A140LJC2 1431 aa22.72■■□□□ 1.23
Vcan-201ENSMUST00000109543 Magi3Q9EQJ9 1476 aa22.69■■□□□ 1.22
Vcan-201ENSMUST00000109543 Plb1Q3TTY0 1478 aa22.67■■□□□ 1.22
Vcan-201ENSMUST00000109543 CadpsQ80TJ1 1355 aa22.64■■□□□ 1.21
Vcan-201ENSMUST00000109543 Grin2aP35436 1464 aa22.63■■□□□ 1.21
Vcan-201ENSMUST00000109543 Gm7298A0A0N4SVU1 1476 aa22.62■■□□□ 1.21
Vcan-201ENSMUST00000109543 Abca5Q8K448 1642 aa22.62■■□□□ 1.21
Vcan-201ENSMUST00000109543 Gpatch8A2A6A1 1505 aa22.6■■□□□ 1.21
Vcan-201ENSMUST00000109543 Disp1Q3TDN0 1521 aa22.59■■□□□ 1.21
Vcan-201ENSMUST00000109543 Fhad1A6PWD2 1420 aa22.58■■□□□ 1.2
Vcan-201ENSMUST00000109543 Mia2Q91ZV0 1396 aa22.57■■□□□ 1.2
Vcan-201ENSMUST00000109543 WizO88286 1684 aaKnown RBP22.55■■□□□ 1.2
Vcan-201ENSMUST00000109543 Naip2Q9QUK4 1447 aa22.54■■□□□ 1.2
Vcan-201ENSMUST00000109543 Kif27Q7M6Z4 1394 aa22.52■■□□□ 1.2
Vcan-201ENSMUST00000109543 Adamts12Q811B3 1600 aa22.52■■□□□ 1.2
Vcan-201ENSMUST00000109543 Ccnb3Q810T2 1396 aa22.52■■□□□ 1.2
Vcan-201ENSMUST00000109543 Vps8Q0P5W1 1427 aa22.52■■□□□ 1.2
Vcan-201ENSMUST00000109543 A2mQ6GQT1 1474 aa22.5■■□□□ 1.19
Vcan-201ENSMUST00000109543 Nop58Q6DFW4 536 aaKnown RBP22.49■■□□□ 1.19
Vcan-201ENSMUST00000109543 Lmtk2Q3TYD6 1471 aa22.48■■□□□ 1.19
Vcan-201ENSMUST00000109543 Ccer2J3QPU5 274 aa22.47■■□□□ 1.19
Vcan-201ENSMUST00000109543 Soga1E1U8D0 1418 aa22.47■■□□□ 1.19
Vcan-201ENSMUST00000109543 Cdk11bP24788 784 aaKnown RBP22.46■■□□□ 1.19
Vcan-201ENSMUST00000109543 PxdnQ3UQ28 1475 aa22.45■■□□□ 1.19
Vcan-201ENSMUST00000109543 Setd1bQ8CFT2 1985 aa22.45■■□□□ 1.18
Vcan-201ENSMUST00000109543 Ankrd36D3Z4K0 1415 aa22.43■■□□□ 1.18
Vcan-201ENSMUST00000109543 Ift140E9PY46 1464 aa22.43■■□□□ 1.18
Vcan-201ENSMUST00000109543 NexmifQ5DTT1 1515 aa22.41■■□□□ 1.18
Vcan-201ENSMUST00000109543 BC005561E9Q5E2 1589 aa22.41■■□□□ 1.18
Vcan-201ENSMUST00000109543 Nup160Q9Z0W3 1402 aaKnown RBP22.39■■□□□ 1.18
Vcan-201ENSMUST00000109543 Abca16E9PWJ7 1678 aa22.39■■□□□ 1.17
Vcan-201ENSMUST00000109543 Anks4bQ8K3X6 423 aa22.39■■□□□ 1.17
Vcan-201ENSMUST00000109543 Chic2Q9D9G3 165 aa22.39■■□□□ 1.17
Vcan-201ENSMUST00000109543 Gcc2Q8CHG3 1679 aa22.37■■□□□ 1.17
Vcan-201ENSMUST00000109543 Pbrm1Q8BSQ9 1634 aaKnown RBP22.37■■□□□ 1.17
Vcan-201ENSMUST00000109543 Hspa5P20029 655 aaKnown RBP22.36■■□□□ 1.17
Vcan-201ENSMUST00000109543 WrnO09053 1401 aa22.35■■□□□ 1.17
Vcan-201ENSMUST00000109543 UacaQ8CGB3 1411 aa22.33■■□□□ 1.17
Vcan-201ENSMUST00000109543 Dennd4bQ3U1Y4 1499 aa22.33■■□□□ 1.17
Vcan-201ENSMUST00000109543 NclP09405 707 aaKnown RBP22.33■■□□□ 1.17
Vcan-201ENSMUST00000109543 Ube2uB1AUC4 352 aa22.32■■□□□ 1.16
Vcan-201ENSMUST00000109543 Arhgap27A2AB59 869 aa22.3■■□□□ 1.16
Vcan-201ENSMUST00000109543 Lrriq1Q0P5X1 1673 aa22.28■■□□□ 1.16
Vcan-201ENSMUST00000109543 Mug1P28665 1476 aa22.27■■□□□ 1.15
Vcan-201ENSMUST00000109543 Ncoa3O09000 1398 aa22.26■■□□□ 1.15
Vcan-201ENSMUST00000109543 Rapgef6Q5NCJ1 1609 aa22.25■■□□□ 1.15
Vcan-201ENSMUST00000109543 Abcc2Q8VI47 1543 aa22.24■■□□□ 1.15
Vcan-201ENSMUST00000109543 Cc2d2bA0A286YDU8 1405 aa22.23■■□□□ 1.15
Vcan-201ENSMUST00000109543 Shroom2A2ALU4 1481 aa22.21■■□□□ 1.15
Vcan-201ENSMUST00000109543 Fhod3Q76LL6 1578 aa22.21■■□□□ 1.15
Vcan-201ENSMUST00000109543 Cul7Q8VE73 1689 aa22.19■■□□□ 1.14
Vcan-201ENSMUST00000109543 Cabp1Q9JLK7 227 aa22.18■■□□□ 1.14
Vcan-201ENSMUST00000109543 Rfx7F8VPJ6 1459 aa22.17■■□□□ 1.14
Vcan-201ENSMUST00000109543 Abcc5Q9R1X5 1436 aa22.16■■□□□ 1.14
Vcan-201ENSMUST00000109543 Arhgef11Q68FM7 1552 aa22.16■■□□□ 1.14
Vcan-201ENSMUST00000109543 Ncoa2Q61026 1462 aa22.16■■□□□ 1.14
Vcan-201ENSMUST00000109543 Arhgef40Q3UPH7 1517 aa22.15■■□□□ 1.14
Vcan-201ENSMUST00000109543 Mapk8ip2Q9ERE9 830 aa22.15■■□□□ 1.14
Vcan-201ENSMUST00000109543 Plekhh2Q8C115 1491 aa22.14■■□□□ 1.13
Vcan-201ENSMUST00000109543 Gm13697A2AK42 830 aa22.13■■□□□ 1.13
Vcan-201ENSMUST00000109543 Mphosph9A6H5Y1 991 aa22.13■■□□□ 1.13
Vcan-201ENSMUST00000109543 Naip5Q9R016 1403 aa22.12■■□□□ 1.13
Vcan-201ENSMUST00000109543 Cdc42bpaQ3UU96 1719 aa22.11■■□□□ 1.13
Vcan-201ENSMUST00000109543 Arhgap31A6X8Z5 1425 aa22.1■■□□□ 1.13
Vcan-201ENSMUST00000109543 Kdm6bQ5NCY0 1641 aa22.1■■□□□ 1.13
Vcan-201ENSMUST00000109543 Camsap2Q8C1B1 1461 aa22.09■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms