RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Pdap1Q3UHX2 181 aaKnown RBP16.25■□□□□ 0.19
Ccdc54-201ENSMUST00000062439 Esf1Q3V1V3 845 aaKnown RBP16.25■□□□□ 0.19
Ccdc54-201ENSMUST00000062439 P3h3Q8CG70 732 aa16.23■□□□□ 0.19
Ccdc54-201ENSMUST00000062439 UncxO08934 530 aa16.22■□□□□ 0.19
Ccdc54-201ENSMUST00000062439 PygbQ8CI94 843 aaKnown RBP16.22■□□□□ 0.19
Ccdc54-201ENSMUST00000062439 Kank3Q9Z1P7 791 aa16.2■□□□□ 0.18
Ccdc54-201ENSMUST00000062439 Stk3Q9JI10 497 aa16.17■□□□□ 0.18
Ccdc54-201ENSMUST00000062439 Prr29B1ARI9 187 aa16.13■□□□□ 0.17
Ccdc54-201ENSMUST00000062439 SnphQ80U23 495 aa16.13■□□□□ 0.17
Ccdc54-201ENSMUST00000062439 Dnajc5P60904 198 aa16.1■□□□□ 0.17
Ccdc54-201ENSMUST00000062439 Stk25Q9Z2W1 426 aa16.08■□□□□ 0.16
Ccdc54-201ENSMUST00000062439 Pip4p2Q9CZX7 257 aa16.07■□□□□ 0.16
Ccdc54-201ENSMUST00000062439 Map4k4P97820 1233 aaKnown RBP16.06■□□□□ 0.16
Ccdc54-201ENSMUST00000062439 CrebzfQ91ZR3 358 aa16.04■□□□□ 0.16
Ccdc54-201ENSMUST00000062439 Clcn6O35454 870 aa16.02■□□□□ 0.16
Ccdc54-201ENSMUST00000062439 Znf703P0CL69 594 aa16.01■□□□□ 0.15
Ccdc54-201ENSMUST00000062439 Stk24Q99KH8 431 aa15.99■□□□□ 0.15
Ccdc54-201ENSMUST00000062439 Ildr2B5TVM2 661 aa15.98■□□□□ 0.15
Ccdc54-201ENSMUST00000062439 Spryd3E9Q9B3 442 aa15.97■□□□□ 0.15
Ccdc54-201ENSMUST00000062439 Ubap1lG3UW59 384 aa15.9■□□□□ 0.14
Ccdc54-201ENSMUST00000062439 Cacnb1Q8R3Z5 597 aa15.88■□□□□ 0.13
Ccdc54-201ENSMUST00000062439 Mier1Q5UAK0 511 aa15.87■□□□□ 0.13
Ccdc54-201ENSMUST00000062439 Dok7Q18PE0 504 aa15.86■□□□□ 0.13
Ccdc54-201ENSMUST00000062439 Cnksr2Q80YA9 1032 aa15.82■□□□□ 0.12
Ccdc54-201ENSMUST00000062439 ChgaP26339 463 aaKnown RBP15.81■□□□□ 0.12
Ccdc54-201ENSMUST00000062439 Pcdhb17Q91VD8 799 aa15.81■□□□□ 0.12
Ccdc54-201ENSMUST00000062439 Sgip1Q8VD37 806 aa15.79■□□□□ 0.12
Ccdc54-201ENSMUST00000062439 Cypt1Q8CH20 168 aa15.74■□□□□ 0.11
Ccdc54-201ENSMUST00000062439 Arhgef1Q61210 920 aaKnown RBP15.67■□□□□ 0.1
Ccdc54-201ENSMUST00000062439 Zbtb38Q3LR78 1197 aa15.66■□□□□ 0.1
Ccdc54-201ENSMUST00000062439 VaspP70460 375 aaKnown RBP15.65■□□□□ 0.1
Ccdc54-201ENSMUST00000062439 Ndufv2Q9D6J6 248 aa15.65■□□□□ 0.1
Ccdc54-201ENSMUST00000062439 Ric3Q8BPM6 367 aa15.63■□□□□ 0.09
Ccdc54-201ENSMUST00000062439 Tmem132aQ922P8 1018 aa15.62■□□□□ 0.09
Ccdc54-201ENSMUST00000062439 Tulp1Q9Z273 543 aa15.62■□□□□ 0.09
Ccdc54-201ENSMUST00000062439 Znf579Q80VM4 562 aa15.61■□□□□ 0.09
Ccdc54-201ENSMUST00000062439 Vsig10D3YX43 558 aa15.6■□□□□ 0.09
Ccdc54-201ENSMUST00000062439 Slc7a3P70423 618 aa15.58■□□□□ 0.08
Ccdc54-201ENSMUST00000062439 Bclaf1Q8K019 919 aaKnown RBP15.55■□□□□ 0.08
Ccdc54-201ENSMUST00000062439 Erich4Q3UNU4 136 aa15.54■□□□□ 0.08
Ccdc54-201ENSMUST00000062439 1700006A11RikB9EHI3 544 aa15.5■□□□□ 0.07
Ccdc54-201ENSMUST00000062439 GapdhsQ64467 440 aa15.5■□□□□ 0.07
Ccdc54-201ENSMUST00000062439 E9Q0B3 247 aa15.46■□□□□ 0.07
Ccdc54-201ENSMUST00000062439 Zranb1Q7M760 708 aa15.45■□□□□ 0.06
Ccdc54-201ENSMUST00000062439 Stag3O70576 1240 aa15.44■□□□□ 0.06
Ccdc54-201ENSMUST00000062439 Nap1l5Q9JJF0 156 aa15.43■□□□□ 0.06
Ccdc54-201ENSMUST00000062439 Gpr37l1Q99JG2 481 aa15.41■□□□□ 0.06
Ccdc54-201ENSMUST00000062439 Prim1P20664 417 aa15.39■□□□□ 0.05
Ccdc54-201ENSMUST00000062439 Slc24a3Q99PD7 645 aa15.35■□□□□ 0.05
Ccdc54-201ENSMUST00000062439 Znf516Q7TSH3 1157 aa15.33■□□□□ 0.04
Ccdc54-201ENSMUST00000062439 Speer2E9Q9U2 264 aa15.31■□□□□ 0.04
Ccdc54-201ENSMUST00000062439 Gm45233A0A0N4SVE0 221 aa15.3■□□□□ 0.04
Ccdc54-201ENSMUST00000062439 Pdzrn4E9PUZ9 1014 aa15.3■□□□□ 0.04
Ccdc54-201ENSMUST00000062439 Ak7Q9D2H2 614 aa15.3■□□□□ 0.04
Ccdc54-201ENSMUST00000062439 Tox2A2A472 547 aa15.28■□□□□ 0.04
Ccdc54-201ENSMUST00000062439 Znf710Q3U288 666 aa15.27■□□□□ 0.04
Ccdc54-201ENSMUST00000062439 Evi5P97366 809 aa15.23■□□□□ 0.03
Ccdc54-201ENSMUST00000062439 Apba2P98084 750 aa15.23■□□□□ 0.03
Ccdc54-201ENSMUST00000062439 Kank4Q6P9J5 1016 aa15.23■□□□□ 0.03
Ccdc54-201ENSMUST00000062439 Zc3h15Q3TIV5 426 aaKnown RBP15.22■□□□□ 0.03
Ccdc54-201ENSMUST00000062439 Gjc2Q8BQU6 440 aa15.21■□□□□ 0.03
Ccdc54-201ENSMUST00000062439 Ddx11Q6AXC6 880 aa15.19■□□□□ 0.02
Ccdc54-201ENSMUST00000062439 Map3k10Q66L42 940 aa15.18■□□□□ 0.02
Ccdc54-201ENSMUST00000062439 Jph4Q80WT0 628 aa15.16■□□□□ 0.02
Ccdc54-201ENSMUST00000062439 IncenpQ9WU62 880 aa15.16■□□□□ 0.02
Ccdc54-201ENSMUST00000062439 Fkbp4P30416 458 aa15.15■□□□□ 0.02
Ccdc54-201ENSMUST00000062439 Ciz1Q8VEH2 845 aa15.13■□□□□ 0.01
Ccdc54-201ENSMUST00000062439 E2f4Q8R0K9 410 aa15.12■□□□□ 0.01
Ccdc54-201ENSMUST00000062439 Pcdhb20Q91XZ9 799 aa15.11■□□□□ 0.01
Ccdc54-201ENSMUST00000062439 Pak3Q61036 559 aa15.1■□□□□ 0.01
Ccdc54-201ENSMUST00000062439 Ggt6Q6PDE7 497 aa15.09■□□□□ 0.01
Ccdc54-201ENSMUST00000062439 Kdm2aP59997 1161 aa15.08■□□□□ 0
Ccdc54-201ENSMUST00000062439 Irx6Q9ER75 438 aa15.08■□□□□ 0
Ccdc54-201ENSMUST00000062439 Actn4P57780 912 aaKnown RBP15.07■□□□□ 0
Ccdc54-201ENSMUST00000062439 OsbpQ3B7Z2 805 aa15.04■□□□□ -0
Ccdc54-201ENSMUST00000062439 Npm1Q61937 292 aaKnown RBP15.04■□□□□ -0
Ccdc54-201ENSMUST00000062439 Pde8bE9Q4S1 865 aa15.03■□□□□ -0
Ccdc54-201ENSMUST00000062439 Pdia6Q922R8 440 aaKnown RBP15.02■□□□□ -0
Ccdc54-201ENSMUST00000062439 Foxp4Q9DBY0 795 aaKnown RBP15.02■□□□□ -0
Ccdc54-201ENSMUST00000062439 C1qbpO35658 278 aa15.01□□□□□ -0.01
Ccdc54-201ENSMUST00000062439 Ankrd65F6YK91 380 aa15□□□□□ -0.01
Ccdc54-201ENSMUST00000062439 Otop3Q80UF9 577 aa15□□□□□ -0.01
Ccdc54-201ENSMUST00000062439 Dhx30Q99PU8 1217 aaKnown RBP14.99□□□□□ -0.01
Ccdc54-201ENSMUST00000062439 Slain2Q8CI08 581 aa14.98□□□□□ -0.01
Ccdc54-201ENSMUST00000062439 Bcl2l13P59017 434 aa14.97□□□□□ -0.01
Ccdc54-201ENSMUST00000062439 TMEM121BQ99MX7 572 aa14.96□□□□□ -0.01
Ccdc54-201ENSMUST00000062439 Scnn1bQ9WU38 638 aa14.94□□□□□ -0.02
Ccdc54-201ENSMUST00000062439 Sptlc1O35704 473 aa14.92□□□□□ -0.02
Ccdc54-201ENSMUST00000062439 ZyxQ62523 564 aa14.92□□□□□ -0.02
Ccdc54-201ENSMUST00000062439 Irf6P97431 467 aa14.89□□□□□ -0.03
Ccdc54-201ENSMUST00000062439 Lrrc14bQ3UJB3 510 aa14.89□□□□□ -0.03
Ccdc54-201ENSMUST00000062439 Fam117aQ7TNF9 451 aa14.87□□□□□ -0.03
Ccdc54-201ENSMUST00000062439 Bcl11bQ99PV8 884 aa14.87□□□□□ -0.03
Ccdc54-201ENSMUST00000062439 Rasgrp4Q8BTM9 673 aa14.86□□□□□ -0.03
Ccdc54-201ENSMUST00000062439 ArntlQ9WTL8 632 aa14.86□□□□□ -0.03
Ccdc54-201ENSMUST00000062439 Gm13695A2AK44 830 aa14.85□□□□□ -0.03
Ccdc54-201ENSMUST00000062439 Mllt3A2AM29 569 aa14.85□□□□□ -0.03
Ccdc54-201ENSMUST00000062439 Rtl5Q5DTT4 599 aa14.82□□□□□ -0.04
Ccdc54-201ENSMUST00000062439 TprnA2AI08 749 aaKnown RBP14.81□□□□□ -0.04
Ccdc54-201ENSMUST00000062439 Scaf1Q5U4C3 1256 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 86.8 ms