RNA–Protein interactions for RNA: ENSMUST00000056601.10

Vps53-201, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps53, Length 2,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-201ENSMUST00000056601 Shroom4Q1W617 1475 aa20.5■□□□□ 0.87
Vps53-201ENSMUST00000056601 TchhA0A0B4J1F9 1599 aa20.5■□□□□ 0.87
Vps53-201ENSMUST00000056601 Znf710Q3U288 666 aa20.49■□□□□ 0.87
Vps53-201ENSMUST00000056601 Naip1Q9QWK5 1403 aa20.47■□□□□ 0.87
Vps53-201ENSMUST00000056601 Map3k1P53349 1493 aa20.46■□□□□ 0.87
Vps53-201ENSMUST00000056601 Lmod2Q3UHZ5 550 aa20.45■□□□□ 0.86
Vps53-201ENSMUST00000056601 AqrQ8CFQ3 1481 aaKnown RBP20.44■□□□□ 0.86
Vps53-201ENSMUST00000056601 Kif15Q6P9L6 1387 aa20.43■□□□□ 0.86
Vps53-201ENSMUST00000056601 Anp32aO35381 247 aa20.42■□□□□ 0.86
Vps53-201ENSMUST00000056601 Hspa5P20029 655 aaKnown RBP20.38■□□□□ 0.85
Vps53-201ENSMUST00000056601 Lamc3Q9R0B6 1581 aa20.38■□□□□ 0.85
Vps53-201ENSMUST00000056601 Camsap1A2AHC3 1581 aa20.36■□□□□ 0.85
Vps53-201ENSMUST00000056601 Slx4Q6P1D7 1565 aa20.36■□□□□ 0.85
Vps53-201ENSMUST00000056601 Ankrd26Q811D2 1581 aa20.35■□□□□ 0.85
Vps53-201ENSMUST00000056601 Pds5bQ4VA53 1446 aaKnown RBP20.34■□□□□ 0.85
Vps53-201ENSMUST00000056601 Erich3F6QRE9 1637 aa20.34■□□□□ 0.85
Vps53-201ENSMUST00000056601 Gm13697A2AK42 830 aa20.34■□□□□ 0.85
Vps53-201ENSMUST00000056601 Pcf11G3X9Z4 1553 aa20.34■□□□□ 0.85
Vps53-201ENSMUST00000056601 Frmpd1A2AKB4 1549 aa20.33■□□□□ 0.85
Vps53-201ENSMUST00000056601 UacaQ8CGB3 1411 aa20.33■□□□□ 0.85
Vps53-201ENSMUST00000056601 Mroh2bQ7M6Y6 1581 aa20.33■□□□□ 0.84
Vps53-201ENSMUST00000056601 Calr4Q3TQS0 420 aa20.31■□□□□ 0.84
Vps53-201ENSMUST00000056601 Slc24a1Q91WD8 1130 aa20.31■□□□□ 0.84
Vps53-201ENSMUST00000056601 Ccer2J3QPU5 274 aa20.27■□□□□ 0.84
Vps53-201ENSMUST00000056601 DiexfQ8BTT6 772 aaKnown RBP20.27■□□□□ 0.84
Vps53-201ENSMUST00000056601 Wdr62Q3U3T8 1523 aa20.27■□□□□ 0.83
Vps53-201ENSMUST00000056601 Grin2bQ01097 1482 aa20.26■□□□□ 0.83
Vps53-201ENSMUST00000056601 3425401B19RikD3Z1D3 1412 aa20.25■□□□□ 0.83
Vps53-201ENSMUST00000056601 Ankrd36D3Z4K0 1415 aa20.24■□□□□ 0.83
Vps53-201ENSMUST00000056601 Ube2uB1AUC4 352 aa20.24■□□□□ 0.83
Vps53-201ENSMUST00000056601 Fhad1A6PWD2 1420 aa20.23■□□□□ 0.83
Vps53-201ENSMUST00000056601 CntlnA2AM05 1397 aa20.23■□□□□ 0.83
Vps53-201ENSMUST00000056601 Mia2Q91ZV0 1396 aa20.23■□□□□ 0.83
Vps53-201ENSMUST00000056601 Nolc1E9Q5C9 702 aaKnown RBP20.22■□□□□ 0.83
Vps53-201ENSMUST00000056601 Dhx29Q6PGC1 1365 aaKnown RBP20.21■□□□□ 0.83
Vps53-201ENSMUST00000056601 Sin3aQ60520 1274 aaKnown RBP20.21■□□□□ 0.83
Vps53-201ENSMUST00000056601 Bcl11aQ9QYE3 773 aa20.2■□□□□ 0.82
Vps53-201ENSMUST00000056601 Fyco1Q8VDC1 1437 aa20.19■□□□□ 0.82
Vps53-201ENSMUST00000056601 Lmo7E9PYF4 1699 aaKnown RBP20.17■□□□□ 0.82
Vps53-201ENSMUST00000056601 Smg6P61406 1418 aaKnown RBP20.15■□□□□ 0.82
Vps53-201ENSMUST00000056601 Vps8Q0P5W1 1427 aa20.15■□□□□ 0.82
Vps53-201ENSMUST00000056601 Cux1P53564 1515 aa20.14■□□□□ 0.81
Vps53-201ENSMUST00000056601 Carmil1Q6EDY6 1374 aa20.11■□□□□ 0.81
Vps53-201ENSMUST00000056601 Unc13aQ4KUS2 1712 aa20.1■□□□□ 0.81
Vps53-201ENSMUST00000056601 Eif5bQ05D44 1216 aaKnown RBP20.09■□□□□ 0.81
Vps53-201ENSMUST00000056601 Ercc6F8VPZ5 1481 aa20.08■□□□□ 0.81
Vps53-201ENSMUST00000056601 Rtl5Q5DTT4 599 aa20.08■□□□□ 0.8
Vps53-201ENSMUST00000056601 Naip2Q9QUK4 1447 aa20.07■□□□□ 0.8
Vps53-201ENSMUST00000056601 Efcab5A0JP43 1406 aa20.07■□□□□ 0.8
Vps53-201ENSMUST00000056601 Chic2Q9D9G3 165 aa20.06■□□□□ 0.8
Vps53-201ENSMUST00000056601 Pelp1Q9DBD5 1123 aaKnown RBP20.05■□□□□ 0.8
Vps53-201ENSMUST00000056601 Supt16hQ920B9 1047 aa20.05■□□□□ 0.8
Vps53-201ENSMUST00000056601 Aebp1Q640N1 1128 aa20.04■□□□□ 0.8
Vps53-201ENSMUST00000056601 Ppp4r2Q0VGB7 417 aa20.04■□□□□ 0.8
Vps53-201ENSMUST00000056601 Camsap2Q8C1B1 1461 aa20.03■□□□□ 0.8
Vps53-201ENSMUST00000056601 Gm7298A0A0N4SVU1 1476 aa20.03■□□□□ 0.8
Vps53-201ENSMUST00000056601 Crocc2F6XLV1 1638 aa20.03■□□□□ 0.8
Vps53-201ENSMUST00000056601 Naip5Q9R016 1403 aa20.02■□□□□ 0.8
Vps53-201ENSMUST00000056601 Peg3Q3URU2 1571 aa20.02■□□□□ 0.8
Vps53-201ENSMUST00000056601 Ncoa2Q61026 1462 aa20.02■□□□□ 0.8
Vps53-201ENSMUST00000056601 Npm1Q61937 292 aaKnown RBP20.01■□□□□ 0.79
Vps53-201ENSMUST00000056601 Urb2E9Q7L1 1524 aaKnown RBP20.01■□□□□ 0.79
Vps53-201ENSMUST00000056601 Wdr43Q6ZQL4 677 aaKnown RBP19.99■□□□□ 0.79
Vps53-201ENSMUST00000056601 A2mQ6GQT1 1474 aa19.98■□□□□ 0.79
Vps53-201ENSMUST00000056601 Gm1043A0A140LJC2 1431 aa19.97■□□□□ 0.79
Vps53-201ENSMUST00000056601 Mrs2Q5NCE8 434 aa19.97■□□□□ 0.79
Vps53-201ENSMUST00000056601 Washc2Q6PGL7 1334 aa19.96■□□□□ 0.79
Vps53-201ENSMUST00000056601 Cux2P70298 1426 aa19.94■□□□□ 0.78
Vps53-201ENSMUST00000056601 Ifnlr1Q8CGK5 535 aa19.92■□□□□ 0.78
Vps53-201ENSMUST00000056601 Ccnb3Q810T2 1396 aa19.91■□□□□ 0.78
Vps53-201ENSMUST00000056601 P3h3Q8CG70 732 aa19.9■□□□□ 0.78
Vps53-201ENSMUST00000056601 NrdcQ8BHG1 1161 aa19.89■□□□□ 0.77
Vps53-201ENSMUST00000056601 Dennd4bQ3U1Y4 1499 aa19.89■□□□□ 0.77
Vps53-201ENSMUST00000056601 Cul7Q8VE73 1689 aa19.88■□□□□ 0.77
Vps53-201ENSMUST00000056601 LrpprcQ6PB66 1392 aaKnown RBP19.88■□□□□ 0.77
Vps53-201ENSMUST00000056601 Duox2A2AQ99 1517 aa19.87■□□□□ 0.77
Vps53-201ENSMUST00000056601 Wwc2Q6NXJ0 1187 aa19.87■□□□□ 0.77
Vps53-201ENSMUST00000056601 Mphosph9A6H5Y1 991 aa19.87■□□□□ 0.77
Vps53-201ENSMUST00000056601 Slc4a2P13808 1237 aaKnown RBP19.84■□□□□ 0.77
Vps53-201ENSMUST00000056601 PogzQ8BZH4 1409 aaKnown RBP19.83■□□□□ 0.77
Vps53-201ENSMUST00000056601 Pprc1Q6NZN1 1644 aa19.83■□□□□ 0.77
Vps53-201ENSMUST00000056601 Ubl4bQ9CQ84 188 aa19.82■□□□□ 0.76
Vps53-201ENSMUST00000056601 Exoc6Q8R313 802 aa19.81■□□□□ 0.76
Vps53-201ENSMUST00000056601 Polr1aO35134 1717 aaKnown RBP19.81■□□□□ 0.76
Vps53-201ENSMUST00000056601 SynmQ70IV5 1561 aa19.81■□□□□ 0.76
Vps53-201ENSMUST00000056601 Gm13695A2AK44 830 aa19.8■□□□□ 0.76
Vps53-201ENSMUST00000056601 Thoc2B1AZI6 1594 aaKnown RBP19.8■□□□□ 0.76
Vps53-201ENSMUST00000056601 Ncoa1P70365 1447 aa19.77■□□□□ 0.76
Vps53-201ENSMUST00000056601 Pak3Q61036 559 aa19.77■□□□□ 0.76
Vps53-201ENSMUST00000056601 Phldb1Q6PDH0 1371 aaKnown RBP19.76■□□□□ 0.75
Vps53-201ENSMUST00000056601 Usp47Q8BY87 1376 aa19.75■□□□□ 0.75
Vps53-201ENSMUST00000056601 Rad54l2Q99NG0 1466 aa19.75■□□□□ 0.75
Vps53-201ENSMUST00000056601 Fhod3Q76LL6 1578 aa19.75■□□□□ 0.75
Vps53-201ENSMUST00000056601 Pkd2O35245 966 aa19.74■□□□□ 0.75
Vps53-201ENSMUST00000056601 Samd9lQ69Z37 1561 aa19.74■□□□□ 0.75
Vps53-201ENSMUST00000056601 Lmtk2Q3TYD6 1471 aa19.73■□□□□ 0.75
Vps53-201ENSMUST00000056601 Cabp1Q9JLK7 227 aa19.71■□□□□ 0.75
Vps53-201ENSMUST00000056601 Kif27Q7M6Z4 1394 aa19.71■□□□□ 0.75
Vps53-201ENSMUST00000056601 Liat1Q810M6 228 aa19.71■□□□□ 0.74
Vps53-201ENSMUST00000056601 Zfp644E9QA22 1323 aa19.7■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms