RNA–Protein interactions for RNA: ENSMUST00000029682.10

Thbs3-201, Transcript of Thrombospondin-3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Thbs3, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3-201ENSMUST00000029682 Ercc6F8VPZ5 1481 aa13.48□□□□□ -0.25
Thbs3-201ENSMUST00000029682 Grin2bQ01097 1482 aa13.47□□□□□ -0.25
Thbs3-201ENSMUST00000029682 Tiam1Q60610 1591 aa13.47□□□□□ -0.25
Thbs3-201ENSMUST00000029682 Mroh2bQ7M6Y6 1581 aa13.46□□□□□ -0.25
Thbs3-201ENSMUST00000029682 Mapk8ip2Q9ERE9 830 aa13.46□□□□□ -0.25
Thbs3-201ENSMUST00000029682 Eid3Q3V124 375 aa13.46□□□□□ -0.26
Thbs3-201ENSMUST00000029682 Unc13aQ4KUS2 1712 aa13.45□□□□□ -0.26
Thbs3-201ENSMUST00000029682 Naip1Q9QWK5 1403 aa13.44□□□□□ -0.26
Thbs3-201ENSMUST00000029682 Baz1bQ9Z277 1479 aa13.44□□□□□ -0.26
Thbs3-201ENSMUST00000029682 TchhA0A0B4J1F9 1599 aa13.43□□□□□ -0.26
Thbs3-201ENSMUST00000029682 Ankrd26Q811D2 1581 aa13.41□□□□□ -0.26
Thbs3-201ENSMUST00000029682 AqrQ8CFQ3 1481 aaKnown RBP13.41□□□□□ -0.26
Thbs3-201ENSMUST00000029682 BlmO88700 1416 aa13.41□□□□□ -0.26
Thbs3-201ENSMUST00000029682 Dnajc5bQ9CQ94 199 aa13.41□□□□□ -0.26
Thbs3-201ENSMUST00000029682 Erich3F6QRE9 1637 aa13.41□□□□□ -0.26
Thbs3-201ENSMUST00000029682 Fam71e1A1L3C1 212 aa13.41□□□□□ -0.26
Thbs3-201ENSMUST00000029682 Pcf11G3X9Z4 1553 aa13.36□□□□□ -0.27
Thbs3-201ENSMUST00000029682 Ube2uB1AUC4 352 aa13.36□□□□□ -0.27
Thbs3-201ENSMUST00000029682 Slx4Q6P1D7 1565 aa13.35□□□□□ -0.27
Thbs3-201ENSMUST00000029682 SafbD3YXK2 937 aaKnown RBP13.34□□□□□ -0.27
Thbs3-201ENSMUST00000029682 CntlnA2AM05 1397 aa13.31□□□□□ -0.28
Thbs3-201ENSMUST00000029682 Carmil1Q6EDY6 1374 aa13.31□□□□□ -0.28
Thbs3-201ENSMUST00000029682 Efcab5A0JP43 1406 aa13.31□□□□□ -0.28
Thbs3-201ENSMUST00000029682 Cux2P70298 1426 aa13.31□□□□□ -0.28
Thbs3-201ENSMUST00000029682 Lmo7E9PYF4 1699 aaKnown RBP13.31□□□□□ -0.28
Thbs3-201ENSMUST00000029682 Phldb1Q6PDH0 1371 aaKnown RBP13.3□□□□□ -0.28
Thbs3-201ENSMUST00000029682 Fam50aQ9WV03 339 aaKnown RBP13.3□□□□□ -0.28
Thbs3-201ENSMUST00000029682 Cux1P53564 1515 aa13.3□□□□□ -0.28
Thbs3-201ENSMUST00000029682 Lmod2Q3UHZ5 550 aa13.29□□□□□ -0.28
Thbs3-201ENSMUST00000029682 3425401B19RikD3Z1D3 1412 aa13.27□□□□□ -0.28
Thbs3-201ENSMUST00000029682 Npm1Q61937 292 aaKnown RBP13.27□□□□□ -0.28
Thbs3-201ENSMUST00000029682 LrpprcQ6PB66 1392 aaKnown RBP13.26□□□□□ -0.29
Thbs3-201ENSMUST00000029682 PogzQ8BZH4 1409 aaKnown RBP13.24□□□□□ -0.29
Thbs3-201ENSMUST00000029682 Fyco1Q8VDC1 1437 aa13.24□□□□□ -0.29
Thbs3-201ENSMUST00000029682 Ubl4bQ9CQ84 188 aa13.24□□□□□ -0.29
Thbs3-201ENSMUST00000029682 Duox2A2AQ99 1517 aa13.23□□□□□ -0.29
Thbs3-201ENSMUST00000029682 Urb2E9Q7L1 1524 aaKnown RBP13.23□□□□□ -0.29
Thbs3-201ENSMUST00000029682 Fhad1A6PWD2 1420 aa13.23□□□□□ -0.29
Thbs3-201ENSMUST00000029682 Peg3Q3URU2 1571 aa13.22□□□□□ -0.29
Thbs3-201ENSMUST00000029682 Mia2Q91ZV0 1396 aa13.21□□□□□ -0.29
Thbs3-201ENSMUST00000029682 UacaQ8CGB3 1411 aa13.21□□□□□ -0.3
Thbs3-201ENSMUST00000029682 NclP09405 707 aaKnown RBP13.21□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Ccer2J3QPU5 274 aa13.2□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Ankrd36D3Z4K0 1415 aa13.2□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Rpap1Q80TE0 1409 aa13.2□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Aebp1Q640N1 1128 aa13.19□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Vps8Q0P5W1 1427 aa13.18□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Fam135aQ6NS59 1506 aa13.17□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Dhx29Q6PGC1 1365 aaKnown RBP13.17□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Gm1043A0A140LJC2 1431 aa13.17□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Hspa5P20029 655 aaKnown RBP13.17□□□□□ -0.3
Thbs3-201ENSMUST00000029682 SynmQ70IV5 1561 aa13.17□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Tnnt3Q9QZ47 272 aa13.16□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Hnrnpul2Q00PI9 745 aaKnown RBP13.16□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Naip2Q9QUK4 1447 aa13.15□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Gm7298A0A0N4SVU1 1476 aa13.15□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Ttbk1Q6PCN3 1308 aa13.15□□□□□ -0.3
Thbs3-201ENSMUST00000029682 Samd9lQ69Z37 1561 aa13.13□□□□□ -0.31
Thbs3-201ENSMUST00000029682 Gm13697A2AK42 830 aa13.13□□□□□ -0.31
Thbs3-201ENSMUST00000029682 Polr1aO35134 1717 aaKnown RBP13.13□□□□□ -0.31
Thbs3-201ENSMUST00000029682 Crocc2F6XLV1 1638 aa13.11□□□□□ -0.31
Thbs3-201ENSMUST00000029682 Rad54l2Q99NG0 1466 aa13.1□□□□□ -0.31
Thbs3-201ENSMUST00000029682 Amer1Q7TS75 1132 aa13.1□□□□□ -0.31
Thbs3-201ENSMUST00000029682 A2mQ6GQT1 1474 aa13.09□□□□□ -0.31
Thbs3-201ENSMUST00000029682 Znf710Q3U288 666 aa13.07□□□□□ -0.32
Thbs3-201ENSMUST00000029682 Stra8P70278 393 aa13.07□□□□□ -0.32
Thbs3-201ENSMUST00000029682 Camsap2Q8C1B1 1461 aa13.06□□□□□ -0.32
Thbs3-201ENSMUST00000029682 Ccnb3Q810T2 1396 aa13.06□□□□□ -0.32
Thbs3-201ENSMUST00000029682 Dennd4bQ3U1Y4 1499 aa13.05□□□□□ -0.32
Thbs3-201ENSMUST00000029682 Lmtk2Q3TYD6 1471 aa13.04□□□□□ -0.32
Thbs3-201ENSMUST00000029682 EprsQ8CGC7 1512 aaKnown RBP13.03□□□□□ -0.32
Thbs3-201ENSMUST00000029682 Naip5Q9R016 1403 aa13.03□□□□□ -0.32
Thbs3-201ENSMUST00000029682 Chic2Q9D9G3 165 aa13.03□□□□□ -0.32
Thbs3-201ENSMUST00000029682 Dnajc5P60904 198 aa13.02□□□□□ -0.33
Thbs3-201ENSMUST00000029682 CadpsQ80TJ1 1355 aa13.01□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Gpatch8A2A6A1 1505 aa13.01□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Pla2r1Q62028 1487 aa13□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Sin3aQ60520 1274 aaKnown RBP12.99□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Cul7Q8VE73 1689 aa12.99□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Kif27Q7M6Z4 1394 aa12.98□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Ncoa2Q61026 1462 aa12.98□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Fhod3Q76LL6 1578 aa12.97□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Abca5Q8K448 1642 aa12.97□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Smg6P61406 1418 aaKnown RBP12.96□□□□□ -0.33
Thbs3-201ENSMUST00000029682 Magi3Q9EQJ9 1476 aa12.95□□□□□ -0.34
Thbs3-201ENSMUST00000029682 Mphosph9A6H5Y1 991 aa12.94□□□□□ -0.34
Thbs3-201ENSMUST00000029682 NexmifQ5DTT1 1515 aa12.94□□□□□ -0.34
Thbs3-201ENSMUST00000029682 Kif21aQ9QXL2 1672 aa12.93□□□□□ -0.34
Thbs3-201ENSMUST00000029682 Gcc2Q8CHG3 1679 aa12.92□□□□□ -0.34
Thbs3-201ENSMUST00000029682 BC005561E9Q5E2 1589 aa12.92□□□□□ -0.34
Thbs3-201ENSMUST00000029682 Grin2aP35436 1464 aa12.91□□□□□ -0.34
Thbs3-201ENSMUST00000029682 Rfx7F8VPJ6 1459 aa12.91□□□□□ -0.34
Thbs3-201ENSMUST00000029682 Setbp1Q9Z180 1582 aa12.9□□□□□ -0.34
Thbs3-201ENSMUST00000029682 Cabp1Q9JLK7 227 aa12.89□□□□□ -0.35
Thbs3-201ENSMUST00000029682 Soga1E1U8D0 1418 aa12.88□□□□□ -0.35
Thbs3-201ENSMUST00000029682 Adamts12Q811B3 1600 aa12.88□□□□□ -0.35
Thbs3-201ENSMUST00000029682 WizO88286 1684 aaKnown RBP12.88□□□□□ -0.35
Thbs3-201ENSMUST00000029682 Pprc1Q6NZN1 1644 aa12.87□□□□□ -0.35
Thbs3-201ENSMUST00000029682 Mug1P28665 1476 aa12.87□□□□□ -0.35
Thbs3-201ENSMUST00000029682 Disp1Q3TDN0 1521 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 122.2 ms