RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Eid3Q3V124 375 aa12.02□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 Tnnt3Q9QZ47 272 aa12.02□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 Fyco1Q8VDC1 1437 aa12.02□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 PtprkP35822 1457 aa12□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 Dhx29Q6PGC1 1365 aaKnown RBP11.99□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 Mroh2bQ7M6Y6 1581 aa11.99□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 AqrQ8CFQ3 1481 aaKnown RBP11.99□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 Aebp1Q640N1 1128 aa11.98□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 PogzQ8BZH4 1409 aaKnown RBP11.97□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 Neurod1Q60867 357 aa11.96□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 Arhgef5E9Q7D5 1581 aa11.96□□□□□ -0.49
Sf3b1-201ENSMUST00000027127 Arap1Q4LDD4 1452 aa11.95□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 Aebp2Q9Z248 504 aaKnown RBP11.95□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 Anks4bQ8K3X6 423 aa11.95□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 Ppargc1bQ8VHJ7 1014 aa11.95□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 Duox2A2AQ99 1517 aa11.94□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 Polr1aO35134 1717 aaKnown RBP11.94□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 CenpbP27790 599 aa11.94□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 Kif27Q7M6Z4 1394 aa11.92□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 Ncapd3Q6ZQK0 1506 aa11.92□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 Naip1Q9QWK5 1403 aa11.91□□□□□ -0.5
Sf3b1-201ENSMUST00000027127 Tiam1Q60610 1591 aa11.89□□□□□ -0.51
Sf3b1-201ENSMUST00000027127 Cux1P53564 1515 aa11.89□□□□□ -0.51
Sf3b1-201ENSMUST00000027127 Chic2Q9D9G3 165 aa11.88□□□□□ -0.51
Sf3b1-201ENSMUST00000027127 Mrc2Q64449 1479 aa11.84□□□□□ -0.51
Sf3b1-201ENSMUST00000027127 Fam135aQ6NS59 1506 aa11.84□□□□□ -0.51
Sf3b1-201ENSMUST00000027127 Eif4g1Q6NZJ6 1600 aaKnown RBP11.83□□□□□ -0.51
Sf3b1-201ENSMUST00000027127 Arhgap27A2AB59 869 aa11.83□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 NrdcQ8BHG1 1161 aa11.83□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Hdac5Q9Z2V6 1113 aa11.82□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Fhad1A6PWD2 1420 aa11.82□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 UacaQ8CGB3 1411 aa11.81□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 SynmQ70IV5 1561 aa11.81□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Anp32bQ9EST5 272 aaKnown RBP11.8□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Mtus2Q3UHD3 1353 aa11.8□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Amer1Q7TS75 1132 aa11.8□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Thoc2B1AZI6 1594 aaKnown RBP11.79□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Ankrd36D3Z4K0 1415 aa11.79□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Dhx57Q6P5D3 1388 aaKnown RBP11.79□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Gm13697A2AK42 830 aa11.79□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Rad54l2Q99NG0 1466 aa11.79□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Ccnb3Q810T2 1396 aa11.79□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Clstn2Q9ER65 966 aa11.78□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Ankrd26Q811D2 1581 aa11.78□□□□□ -0.52
Sf3b1-201ENSMUST00000027127 Vps8Q0P5W1 1427 aa11.77□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 Pcf11G3X9Z4 1553 aa11.77□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 Slc24a1Q91WD8 1130 aa11.77□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 Crocc2F6XLV1 1638 aa11.76□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 EprsQ8CGC7 1512 aaKnown RBP11.74□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 Gm7298A0A0N4SVU1 1476 aa11.72□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 Hspa5P20029 655 aaKnown RBP11.72□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 Fkbp15Q6P9Q6 1216 aaKnown RBP11.72□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 Plekhh2Q8C115 1491 aa11.72□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 Erich3F6QRE9 1637 aa11.71□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 Ift140E9PY46 1464 aa11.71□□□□□ -0.53
Sf3b1-201ENSMUST00000027127 CadpsQ80TJ1 1355 aa11.7□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Urb2E9Q7L1 1524 aaKnown RBP11.7□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 WrnO09053 1401 aa11.69□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Ncoa2Q61026 1462 aa11.68□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Mphosph9A6H5Y1 991 aa11.68□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Plb1Q3TTY0 1478 aa11.68□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Aplp2Q06335 707 aa11.67□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Mapk8ip2Q9ERE9 830 aa11.67□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Cabp1Q9JLK7 227 aa11.67□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Slx4Q6P1D7 1565 aa11.66□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Cc2d2bA0A286YDU8 1405 aa11.65□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Cwc22Q8C5N3 908 aaKnown RBP11.65□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Peg3Q3URU2 1571 aa11.65□□□□□ -0.54
Sf3b1-201ENSMUST00000027127 Grin2aP35436 1464 aa11.64□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Pkd2O35245 966 aa11.64□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 TchhA0A0B4J1F9 1599 aa11.64□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Hnrnpul2Q00PI9 745 aaKnown RBP11.64□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Naip2Q9QUK4 1447 aa11.63□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Soga1E1U8D0 1418 aa11.63□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Csrnp3P59055 597 aa11.62□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Unc13aQ4KUS2 1712 aa11.62□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Samd9lQ69Z37 1561 aa11.62□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Myt1Q8CFC2 1127 aa11.62□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Zbtb7cQ8VCZ7 619 aa11.61□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Os9Q8K2C7 672 aa11.6□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Gm1043A0A140LJC2 1431 aa11.59□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 Rgl3Q3UYI5 709 aa11.59□□□□□ -0.55
Sf3b1-201ENSMUST00000027127 4930567H17RikQ3V0K5 233 aa11.58□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Pla2r1Q62028 1487 aa11.58□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 AknaQ80VW7 1404 aa11.57□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Gpatch8A2A6A1 1505 aa11.57□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Rfx7F8VPJ6 1459 aa11.57□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Eif5bQ05D44 1216 aaKnown RBP11.56□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Fam163aQ8CAA5 168 aa11.55□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Lmo7E9PYF4 1699 aaKnown RBP11.55□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 A2mQ6GQT1 1474 aa11.55□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 NexmifQ5DTT1 1515 aa11.55□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Map4P27546 1125 aaKnown RBP11.55□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Jph4Q80WT0 628 aa11.55□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Il16O54824 1322 aa11.55□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Mrs2Q5NCE8 434 aa11.54□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Mug1P28665 1476 aa11.54□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Disp1Q3TDN0 1521 aa11.54□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 3425401B19RikD3Z1D3 1412 aa11.54□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Anp32aO35381 247 aa11.54□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms