RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Atad2bE9Q166 1460 aaKnown RBP27.53■■■□□ 2
Tram1-201ENSMUST00000027068 Lmod2Q3UHZ5 550 aa27.48■■□□□ 1.99
Tram1-201ENSMUST00000027068 Rpap1Q80TE0 1409 aa27.47■■□□□ 1.99
Tram1-201ENSMUST00000027068 AqrQ8CFQ3 1481 aaKnown RBP27.46■■□□□ 1.99
Tram1-201ENSMUST00000027068 Tiam1Q60610 1591 aa27.43■■□□□ 1.98
Tram1-201ENSMUST00000027068 Shroom4Q1W617 1475 aa27.42■■□□□ 1.98
Tram1-201ENSMUST00000027068 Kif15Q6P9L6 1387 aa27.42■■□□□ 1.98
Tram1-201ENSMUST00000027068 Naip1Q9QWK5 1403 aa27.41■■□□□ 1.98
Tram1-201ENSMUST00000027068 Znf710Q3U288 666 aa27.37■■□□□ 1.97
Tram1-201ENSMUST00000027068 Hspa5P20029 655 aaKnown RBP27.34■■□□□ 1.97
Tram1-201ENSMUST00000027068 TchhA0A0B4J1F9 1599 aa27.32■■□□□ 1.96
Tram1-201ENSMUST00000027068 Frmpd1A2AKB4 1549 aa27.31■■□□□ 1.96
Tram1-201ENSMUST00000027068 Map3k1P53349 1493 aa27.3■■□□□ 1.96
Tram1-201ENSMUST00000027068 Lamc3Q9R0B6 1581 aa27.27■■□□□ 1.96
Tram1-201ENSMUST00000027068 Slx4Q6P1D7 1565 aa27.26■■□□□ 1.95
Tram1-201ENSMUST00000027068 Pds5bQ4VA53 1446 aaKnown RBP27.25■■□□□ 1.95
Tram1-201ENSMUST00000027068 Camsap1A2AHC3 1581 aa27.25■■□□□ 1.95
Tram1-201ENSMUST00000027068 Ankrd26Q811D2 1581 aa27.24■■□□□ 1.95
Tram1-201ENSMUST00000027068 Stra8P70278 393 aa27.21■■□□□ 1.95
Tram1-201ENSMUST00000027068 Mroh2bQ7M6Y6 1581 aa27.21■■□□□ 1.95
Tram1-201ENSMUST00000027068 Slc24a1Q91WD8 1130 aa27.21■■□□□ 1.95
Tram1-201ENSMUST00000027068 Pcf11G3X9Z4 1553 aa27.2■■□□□ 1.95
Tram1-201ENSMUST00000027068 Amer1Q7TS75 1132 aa27.19■■□□□ 1.94
Tram1-201ENSMUST00000027068 Wdr62Q3U3T8 1523 aa27.16■■□□□ 1.94
Tram1-201ENSMUST00000027068 3425401B19RikD3Z1D3 1412 aa27.16■■□□□ 1.94
Tram1-201ENSMUST00000027068 Sin3aQ60520 1274 aaKnown RBP27.14■■□□□ 1.94
Tram1-201ENSMUST00000027068 Grin2bQ01097 1482 aa27.14■■□□□ 1.93
Tram1-201ENSMUST00000027068 Erich3F6QRE9 1637 aa27.14■■□□□ 1.93
Tram1-201ENSMUST00000027068 Anp32aO35381 247 aa27.13■■□□□ 1.93
Tram1-201ENSMUST00000027068 Gm13697A2AK42 830 aa27.12■■□□□ 1.93
Tram1-201ENSMUST00000027068 Ube2uB1AUC4 352 aa27.1■■□□□ 1.93
Tram1-201ENSMUST00000027068 UacaQ8CGB3 1411 aa27.09■■□□□ 1.93
Tram1-201ENSMUST00000027068 Calr4Q3TQS0 420 aa27.08■■□□□ 1.93
Tram1-201ENSMUST00000027068 Dhx29Q6PGC1 1365 aaKnown RBP27.06■■□□□ 1.92
Tram1-201ENSMUST00000027068 Nolc1E9Q5C9 702 aaKnown RBP27.05■■□□□ 1.92
Tram1-201ENSMUST00000027068 CntlnA2AM05 1397 aa27.02■■□□□ 1.92
Tram1-201ENSMUST00000027068 Cux1P53564 1515 aa27■■□□□ 1.91
Tram1-201ENSMUST00000027068 Fhad1A6PWD2 1420 aa26.99■■□□□ 1.91
Tram1-201ENSMUST00000027068 Ccer2J3QPU5 274 aa26.99■■□□□ 1.91
Tram1-201ENSMUST00000027068 Chic2Q9D9G3 165 aa26.96■■□□□ 1.91
Tram1-201ENSMUST00000027068 Mia2Q91ZV0 1396 aa26.96■■□□□ 1.91
Tram1-201ENSMUST00000027068 Ankrd36D3Z4K0 1415 aa26.96■■□□□ 1.91
Tram1-201ENSMUST00000027068 Lmo7E9PYF4 1699 aaKnown RBP26.96■■□□□ 1.91
Tram1-201ENSMUST00000027068 Fyco1Q8VDC1 1437 aa26.95■■□□□ 1.9
Tram1-201ENSMUST00000027068 Unc13aQ4KUS2 1712 aa26.94■■□□□ 1.9
Tram1-201ENSMUST00000027068 Smg6P61406 1418 aaKnown RBP26.9■■□□□ 1.9
Tram1-201ENSMUST00000027068 Carmil1Q6EDY6 1374 aa26.9■■□□□ 1.9
Tram1-201ENSMUST00000027068 Vps8Q0P5W1 1427 aa26.89■■□□□ 1.9
Tram1-201ENSMUST00000027068 Eif5bQ05D44 1216 aaKnown RBP26.88■■□□□ 1.89
Tram1-201ENSMUST00000027068 Aebp1Q640N1 1128 aa26.88■■□□□ 1.89
Tram1-201ENSMUST00000027068 Ercc6F8VPZ5 1481 aa26.88■■□□□ 1.89
Tram1-201ENSMUST00000027068 Naip2Q9QUK4 1447 aa26.86■■□□□ 1.89
Tram1-201ENSMUST00000027068 Npm1Q61937 292 aaKnown RBP26.85■■□□□ 1.89
Tram1-201ENSMUST00000027068 Gm7298A0A0N4SVU1 1476 aa26.82■■□□□ 1.88
Tram1-201ENSMUST00000027068 Efcab5A0JP43 1406 aa26.81■■□□□ 1.88
Tram1-201ENSMUST00000027068 Urb2E9Q7L1 1524 aaKnown RBP26.77■■□□□ 1.88
Tram1-201ENSMUST00000027068 Cux2P70298 1426 aa26.77■■□□□ 1.88
Tram1-201ENSMUST00000027068 Gm1043A0A140LJC2 1431 aa26.76■■□□□ 1.87
Tram1-201ENSMUST00000027068 Naip5Q9R016 1403 aa26.76■■□□□ 1.87
Tram1-201ENSMUST00000027068 A2mQ6GQT1 1474 aa26.76■■□□□ 1.87
Tram1-201ENSMUST00000027068 Ppp4r2Q0VGB7 417 aa26.76■■□□□ 1.87
Tram1-201ENSMUST00000027068 Supt16hQ920B9 1047 aa26.73■■□□□ 1.87
Tram1-201ENSMUST00000027068 Crocc2F6XLV1 1638 aa26.71■■□□□ 1.87
Tram1-201ENSMUST00000027068 Mrs2Q5NCE8 434 aa26.7■■□□□ 1.86
Tram1-201ENSMUST00000027068 P3h3Q8CG70 732 aa26.7■■□□□ 1.86
Tram1-201ENSMUST00000027068 Ncoa2Q61026 1462 aa26.7■■□□□ 1.86
Tram1-201ENSMUST00000027068 Dennd4bQ3U1Y4 1499 aa26.68■■□□□ 1.86
Tram1-201ENSMUST00000027068 Peg3Q3URU2 1571 aa26.67■■□□□ 1.86
Tram1-201ENSMUST00000027068 Ccnb3Q810T2 1396 aa26.67■■□□□ 1.86
Tram1-201ENSMUST00000027068 Ubl4bQ9CQ84 188 aa26.66■■□□□ 1.86
Tram1-201ENSMUST00000027068 LrpprcQ6PB66 1392 aaKnown RBP26.65■■□□□ 1.86
Tram1-201ENSMUST00000027068 Duox2A2AQ99 1517 aa26.65■■□□□ 1.86
Tram1-201ENSMUST00000027068 Camsap2Q8C1B1 1461 aa26.64■■□□□ 1.86
Tram1-201ENSMUST00000027068 Wwc2Q6NXJ0 1187 aa26.63■■□□□ 1.85
Tram1-201ENSMUST00000027068 Wdr43Q6ZQL4 677 aaKnown RBP26.62■■□□□ 1.85
Tram1-201ENSMUST00000027068 Mphosph9A6H5Y1 991 aa26.61■■□□□ 1.85
Tram1-201ENSMUST00000027068 Washc2Q6PGL7 1334 aa26.6■■□□□ 1.85
Tram1-201ENSMUST00000027068 Slc4a2P13808 1237 aaKnown RBP26.58■■□□□ 1.85
Tram1-201ENSMUST00000027068 Ttbk1Q6PCN3 1308 aa26.58■■□□□ 1.84
Tram1-201ENSMUST00000027068 PogzQ8BZH4 1409 aaKnown RBP26.58■■□□□ 1.84
Tram1-201ENSMUST00000027068 Rad54l2Q99NG0 1466 aa26.55■■□□□ 1.84
Tram1-201ENSMUST00000027068 Hdac5Q9Z2V6 1113 aa26.52■■□□□ 1.84
Tram1-201ENSMUST00000027068 Rtl5Q5DTT4 599 aa26.51■■□□□ 1.83
Tram1-201ENSMUST00000027068 Exoc6Q8R313 802 aa26.51■■□□□ 1.83
Tram1-201ENSMUST00000027068 NrdcQ8BHG1 1161 aa26.5■■□□□ 1.83
Tram1-201ENSMUST00000027068 SynmQ70IV5 1561 aa26.5■■□□□ 1.83
Tram1-201ENSMUST00000027068 Phldb1Q6PDH0 1371 aaKnown RBP26.5■■□□□ 1.83
Tram1-201ENSMUST00000027068 Cul7Q8VE73 1689 aa26.49■■□□□ 1.83
Tram1-201ENSMUST00000027068 Zfp644E9QA22 1323 aa26.49■■□□□ 1.83
Tram1-201ENSMUST00000027068 Samd9lQ69Z37 1561 aa26.46■■□□□ 1.83
Tram1-201ENSMUST00000027068 Pelp1Q9DBD5 1123 aaKnown RBP26.46■■□□□ 1.83
Tram1-201ENSMUST00000027068 Cabp1Q9JLK7 227 aa26.45■■□□□ 1.83
Tram1-201ENSMUST00000027068 Pak3Q61036 559 aa26.45■■□□□ 1.82
Tram1-201ENSMUST00000027068 Pkd2O35245 966 aa26.44■■□□□ 1.82
Tram1-201ENSMUST00000027068 Pprc1Q6NZN1 1644 aa26.44■■□□□ 1.82
Tram1-201ENSMUST00000027068 Usp47Q8BY87 1376 aa26.42■■□□□ 1.82
Tram1-201ENSMUST00000027068 Ncoa1P70365 1447 aa26.4■■□□□ 1.82
Tram1-201ENSMUST00000027068 Thoc2B1AZI6 1594 aaKnown RBP26.4■■□□□ 1.82
Tram1-201ENSMUST00000027068 Gm13695A2AK44 830 aa26.4■■□□□ 1.82
Tram1-201ENSMUST00000027068 Slc4a3P16283 1227 aa26.39■■□□□ 1.82
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms