RNA–Protein interactions for RNA: ENSMUST00000027035.9

Sox17-201, Transcript of Transcription factor SOX-17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sox17, Length 3,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17-201ENSMUST00000027035 Nolc1E9Q5C9 702 aaKnown RBP21.09■□□□□ 0.97
Sox17-201ENSMUST00000027035 Znf710Q3U288 666 aa21.07■□□□□ 0.96
Sox17-201ENSMUST00000027035 NclP09405 707 aaKnown RBP21.06■□□□□ 0.96
Sox17-201ENSMUST00000027035 Tiam1Q60610 1591 aa21.06■□□□□ 0.96
Sox17-201ENSMUST00000027035 TchhA0A0B4J1F9 1599 aa21.05■□□□□ 0.96
Sox17-201ENSMUST00000027035 Fam50aQ9WV03 339 aaKnown RBP21.03■□□□□ 0.96
Sox17-201ENSMUST00000027035 BlmO88700 1416 aa21.02■□□□□ 0.95
Sox17-201ENSMUST00000027035 Calr4Q3TQS0 420 aa20.99■□□□□ 0.95
Sox17-201ENSMUST00000027035 AqrQ8CFQ3 1481 aaKnown RBP20.98■□□□□ 0.95
Sox17-201ENSMUST00000027035 Shroom4Q1W617 1475 aa20.98■□□□□ 0.95
Sox17-201ENSMUST00000027035 Atad2bE9Q166 1460 aaKnown RBP20.98■□□□□ 0.95
Sox17-201ENSMUST00000027035 Naip1Q9QWK5 1403 aa20.98■□□□□ 0.95
Sox17-201ENSMUST00000027035 Stra8P70278 393 aa20.96■□□□□ 0.95
Sox17-201ENSMUST00000027035 Map3k1P53349 1493 aa20.95■□□□□ 0.94
Sox17-201ENSMUST00000027035 Slx4Q6P1D7 1565 aa20.9■□□□□ 0.94
Sox17-201ENSMUST00000027035 Lmod2Q3UHZ5 550 aa20.89■□□□□ 0.94
Sox17-201ENSMUST00000027035 Ttbk1Q6PCN3 1308 aa20.89■□□□□ 0.93
Sox17-201ENSMUST00000027035 Hspa5P20029 655 aaKnown RBP20.88■□□□□ 0.93
Sox17-201ENSMUST00000027035 Ankrd26Q811D2 1581 aa20.88■□□□□ 0.93
Sox17-201ENSMUST00000027035 Erich3F6QRE9 1637 aa20.87■□□□□ 0.93
Sox17-201ENSMUST00000027035 Lamc3Q9R0B6 1581 aa20.87■□□□□ 0.93
Sox17-201ENSMUST00000027035 Camsap1A2AHC3 1581 aa20.86■□□□□ 0.93
Sox17-201ENSMUST00000027035 Pcf11G3X9Z4 1553 aa20.86■□□□□ 0.93
Sox17-201ENSMUST00000027035 Kif15Q6P9L6 1387 aa20.86■□□□□ 0.93
Sox17-201ENSMUST00000027035 Eif5bQ05D44 1216 aaKnown RBP20.86■□□□□ 0.93
Sox17-201ENSMUST00000027035 UacaQ8CGB3 1411 aa20.84■□□□□ 0.93
Sox17-201ENSMUST00000027035 Supt16hQ920B9 1047 aa20.84■□□□□ 0.93
Sox17-201ENSMUST00000027035 Ppp4r2Q0VGB7 417 aa20.83■□□□□ 0.92
Sox17-201ENSMUST00000027035 Gm13697A2AK42 830 aa20.81■□□□□ 0.92
Sox17-201ENSMUST00000027035 Mroh2bQ7M6Y6 1581 aa20.81■□□□□ 0.92
Sox17-201ENSMUST00000027035 Frmpd1A2AKB4 1549 aa20.8■□□□□ 0.92
Sox17-201ENSMUST00000027035 3425401B19RikD3Z1D3 1412 aa20.78■□□□□ 0.92
Sox17-201ENSMUST00000027035 Pds5bQ4VA53 1446 aaKnown RBP20.75■□□□□ 0.91
Sox17-201ENSMUST00000027035 Pelp1Q9DBD5 1123 aaKnown RBP20.75■□□□□ 0.91
Sox17-201ENSMUST00000027035 Grin2bQ01097 1482 aa20.74■□□□□ 0.91
Sox17-201ENSMUST00000027035 Wdr62Q3U3T8 1523 aa20.74■□□□□ 0.91
Sox17-201ENSMUST00000027035 Ankrd36D3Z4K0 1415 aa20.73■□□□□ 0.91
Sox17-201ENSMUST00000027035 Dhx29Q6PGC1 1365 aaKnown RBP20.72■□□□□ 0.91
Sox17-201ENSMUST00000027035 Sin3aQ60520 1274 aaKnown RBP20.72■□□□□ 0.91
Sox17-201ENSMUST00000027035 Fhad1A6PWD2 1420 aa20.72■□□□□ 0.91
Sox17-201ENSMUST00000027035 Rtl5Q5DTT4 599 aa20.71■□□□□ 0.91
Sox17-201ENSMUST00000027035 Lmo7E9PYF4 1699 aaKnown RBP20.7■□□□□ 0.9
Sox17-201ENSMUST00000027035 Ccer2J3QPU5 274 aa20.69■□□□□ 0.9
Sox17-201ENSMUST00000027035 P3h3Q8CG70 732 aa20.68■□□□□ 0.9
Sox17-201ENSMUST00000027035 CntlnA2AM05 1397 aa20.67■□□□□ 0.9
Sox17-201ENSMUST00000027035 Mia2Q91ZV0 1396 aa20.67■□□□□ 0.9
Sox17-201ENSMUST00000027035 Smg6P61406 1418 aaKnown RBP20.67■□□□□ 0.9
Sox17-201ENSMUST00000027035 Cux1P53564 1515 aa20.65■□□□□ 0.9
Sox17-201ENSMUST00000027035 Wdr43Q6ZQL4 677 aaKnown RBP20.65■□□□□ 0.9
Sox17-201ENSMUST00000027035 Fyco1Q8VDC1 1437 aa20.65■□□□□ 0.9
Sox17-201ENSMUST00000027035 Vps8Q0P5W1 1427 aa20.64■□□□□ 0.89
Sox17-201ENSMUST00000027035 Unc13aQ4KUS2 1712 aa20.64■□□□□ 0.89
Sox17-201ENSMUST00000027035 Pak3Q61036 559 aa20.63■□□□□ 0.89
Sox17-201ENSMUST00000027035 Ube2uB1AUC4 352 aa20.62■□□□□ 0.89
Sox17-201ENSMUST00000027035 Naip2Q9QUK4 1447 aa20.57■□□□□ 0.88
Sox17-201ENSMUST00000027035 Efcab5A0JP43 1406 aa20.57■□□□□ 0.88
Sox17-201ENSMUST00000027035 Crocc2F6XLV1 1638 aa20.56■□□□□ 0.88
Sox17-201ENSMUST00000027035 Carmil1Q6EDY6 1374 aa20.55■□□□□ 0.88
Sox17-201ENSMUST00000027035 Ncoa2Q61026 1462 aa20.55■□□□□ 0.88
Sox17-201ENSMUST00000027035 Camsap2Q8C1B1 1461 aa20.55■□□□□ 0.88
Sox17-201ENSMUST00000027035 Slc4a3P16283 1227 aa20.54■□□□□ 0.88
Sox17-201ENSMUST00000027035 Naip5Q9R016 1403 aa20.54■□□□□ 0.88
Sox17-201ENSMUST00000027035 Gm7298A0A0N4SVU1 1476 aa20.53■□□□□ 0.88
Sox17-201ENSMUST00000027035 Peg3Q3URU2 1571 aa20.53■□□□□ 0.88
Sox17-201ENSMUST00000027035 Chic2Q9D9G3 165 aa20.51■□□□□ 0.87
Sox17-201ENSMUST00000027035 Urb2E9Q7L1 1524 aaKnown RBP20.5■□□□□ 0.87
Sox17-201ENSMUST00000027035 Washc2Q6PGL7 1334 aa20.49■□□□□ 0.87
Sox17-201ENSMUST00000027035 Hdac5Q9Z2V6 1113 aa20.49■□□□□ 0.87
Sox17-201ENSMUST00000027035 Aebp1Q640N1 1128 aa20.48■□□□□ 0.87
Sox17-201ENSMUST00000027035 Ercc6F8VPZ5 1481 aa20.48■□□□□ 0.87
Sox17-201ENSMUST00000027035 A2mQ6GQT1 1474 aa20.48■□□□□ 0.87
Sox17-201ENSMUST00000027035 Gm1043A0A140LJC2 1431 aa20.48■□□□□ 0.87
Sox17-201ENSMUST00000027035 Mrs2Q5NCE8 434 aa20.46■□□□□ 0.87
Sox17-201ENSMUST00000027035 Cul7Q8VE73 1689 aa20.44■□□□□ 0.86
Sox17-201ENSMUST00000027035 Dennd4bQ3U1Y4 1499 aa20.44■□□□□ 0.86
Sox17-201ENSMUST00000027035 Liat1Q810M6 228 aa20.42■□□□□ 0.86
Sox17-201ENSMUST00000027035 Wwc2Q6NXJ0 1187 aa20.4■□□□□ 0.86
Sox17-201ENSMUST00000027035 Pprc1Q6NZN1 1644 aa20.39■□□□□ 0.85
Sox17-201ENSMUST00000027035 Npm1Q61937 292 aaKnown RBP20.37■□□□□ 0.85
Sox17-201ENSMUST00000027035 Ccnb3Q810T2 1396 aa20.37■□□□□ 0.85
Sox17-201ENSMUST00000027035 Cux2P70298 1426 aa20.36■□□□□ 0.85
Sox17-201ENSMUST00000027035 Slc4a2P13808 1237 aaKnown RBP20.36■□□□□ 0.85
Sox17-201ENSMUST00000027035 Thoc2B1AZI6 1594 aaKnown RBP20.34■□□□□ 0.85
Sox17-201ENSMUST00000027035 Upf2A2AT37 1269 aaKnown RBP20.33■□□□□ 0.85
Sox17-201ENSMUST00000027035 Egfem1Q8C088 590 aa20.33■□□□□ 0.85
Sox17-201ENSMUST00000027035 Mphosph9A6H5Y1 991 aa20.32■□□□□ 0.84
Sox17-201ENSMUST00000027035 Amer1Q7TS75 1132 aa20.32■□□□□ 0.84
Sox17-201ENSMUST00000027035 NrdcQ8BHG1 1161 aa20.32■□□□□ 0.84
Sox17-201ENSMUST00000027035 Duox2A2AQ99 1517 aa20.32■□□□□ 0.84
Sox17-201ENSMUST00000027035 Exoc6Q8R313 802 aa20.31■□□□□ 0.84
Sox17-201ENSMUST00000027035 LrpprcQ6PB66 1392 aaKnown RBP20.3■□□□□ 0.84
Sox17-201ENSMUST00000027035 Ccdc27Q3V036 639 aa20.29■□□□□ 0.84
Sox17-201ENSMUST00000027035 SynmQ70IV5 1561 aa20.28■□□□□ 0.84
Sox17-201ENSMUST00000027035 PogzQ8BZH4 1409 aaKnown RBP20.28■□□□□ 0.84
Sox17-201ENSMUST00000027035 Kcnh8P59111 1102 aa20.28■□□□□ 0.84
Sox17-201ENSMUST00000027035 Fhod3Q76LL6 1578 aa20.28■□□□□ 0.84
Sox17-201ENSMUST00000027035 Ncoa1P70365 1447 aa20.28■□□□□ 0.84
Sox17-201ENSMUST00000027035 Gm13695A2AK44 830 aa20.26■□□□□ 0.83
Sox17-201ENSMUST00000027035 Polr1aO35134 1717 aaKnown RBP20.25■□□□□ 0.83
Sox17-201ENSMUST00000027035 Samd9lQ69Z37 1561 aa20.23■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms