RNA–Protein interactions for RNA: ENSMUST00000005630.10

Msh4-201, Transcript of MutS protein homolog 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh4, Length 3,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-201ENSMUST00000005630 Ppargc1bQ8VHJ7 1014 aa18.92■□□□□ 0.62
Msh4-201ENSMUST00000005630 Phldb1Q6PDH0 1371 aaKnown RBP18.91■□□□□ 0.62
Msh4-201ENSMUST00000005630 Cux1P53564 1515 aa18.91■□□□□ 0.62
Msh4-201ENSMUST00000005630 Cux2P70298 1426 aa18.9■□□□□ 0.62
Msh4-201ENSMUST00000005630 Anks4bQ8K3X6 423 aa18.85■□□□□ 0.61
Msh4-201ENSMUST00000005630 Efcab5A0JP43 1406 aa18.83■□□□□ 0.6
Msh4-201ENSMUST00000005630 Fam135aQ6NS59 1506 aa18.82■□□□□ 0.6
Msh4-201ENSMUST00000005630 PogzQ8BZH4 1409 aaKnown RBP18.81■□□□□ 0.6
Msh4-201ENSMUST00000005630 Duox2A2AQ99 1517 aa18.8■□□□□ 0.6
Msh4-201ENSMUST00000005630 Urb2E9Q7L1 1524 aaKnown RBP18.8■□□□□ 0.6
Msh4-201ENSMUST00000005630 BlmO88700 1416 aa18.8■□□□□ 0.6
Msh4-201ENSMUST00000005630 Samd9lQ69Z37 1561 aa18.8■□□□□ 0.6
Msh4-201ENSMUST00000005630 Peg3Q3URU2 1571 aa18.79■□□□□ 0.6
Msh4-201ENSMUST00000005630 Eid3Q3V124 375 aa18.79■□□□□ 0.6
Msh4-201ENSMUST00000005630 LrpprcQ6PB66 1392 aaKnown RBP18.78■□□□□ 0.6
Msh4-201ENSMUST00000005630 3425401B19RikD3Z1D3 1412 aa18.78■□□□□ 0.6
Msh4-201ENSMUST00000005630 Carmil1Q6EDY6 1374 aa18.78■□□□□ 0.6
Msh4-201ENSMUST00000005630 Nop58Q6DFW4 536 aaKnown RBP18.74■□□□□ 0.59
Msh4-201ENSMUST00000005630 SynmQ70IV5 1561 aa18.74■□□□□ 0.59
Msh4-201ENSMUST00000005630 Ubl4bQ9CQ84 188 aa18.72■□□□□ 0.59
Msh4-201ENSMUST00000005630 CntlnA2AM05 1397 aa18.71■□□□□ 0.59
Msh4-201ENSMUST00000005630 Cdk11bP24788 784 aaKnown RBP18.71■□□□□ 0.58
Msh4-201ENSMUST00000005630 Npm1Q61937 292 aaKnown RBP18.68■□□□□ 0.58
Msh4-201ENSMUST00000005630 Gm1043A0A140LJC2 1431 aa18.67■□□□□ 0.58
Msh4-201ENSMUST00000005630 Csrnp3P59055 597 aa18.67■□□□□ 0.58
Msh4-201ENSMUST00000005630 Fyco1Q8VDC1 1437 aa18.64■□□□□ 0.57
Msh4-201ENSMUST00000005630 Rad54l2Q99NG0 1466 aa18.63■□□□□ 0.57
Msh4-201ENSMUST00000005630 Lmod2Q3UHZ5 550 aa18.62■□□□□ 0.57
Msh4-201ENSMUST00000005630 Dhx29Q6PGC1 1365 aaKnown RBP18.6■□□□□ 0.57
Msh4-201ENSMUST00000005630 Polr1aO35134 1717 aaKnown RBP18.59■□□□□ 0.57
Msh4-201ENSMUST00000005630 Gm7298A0A0N4SVU1 1476 aa18.59■□□□□ 0.57
Msh4-201ENSMUST00000005630 Kif21aQ9QXL2 1672 aa18.58■□□□□ 0.57
Msh4-201ENSMUST00000005630 1700123L14RikQ3V2K7 440 aa18.57■□□□□ 0.56
Msh4-201ENSMUST00000005630 Fhad1A6PWD2 1420 aa18.56■□□□□ 0.56
Msh4-201ENSMUST00000005630 Crocc2F6XLV1 1638 aa18.56■□□□□ 0.56
Msh4-201ENSMUST00000005630 Aebp1Q640N1 1128 aa18.56■□□□□ 0.56
Msh4-201ENSMUST00000005630 Naip2Q9QUK4 1447 aa18.55■□□□□ 0.56
Msh4-201ENSMUST00000005630 Pla2r1Q62028 1487 aa18.54■□□□□ 0.56
Msh4-201ENSMUST00000005630 Fam50aQ9WV03 339 aaKnown RBP18.54■□□□□ 0.56
Msh4-201ENSMUST00000005630 Dennd4bQ3U1Y4 1499 aa18.54■□□□□ 0.56
Msh4-201ENSMUST00000005630 Abca5Q8K448 1642 aa18.53■□□□□ 0.56
Msh4-201ENSMUST00000005630 Vps8Q0P5W1 1427 aa18.52■□□□□ 0.56
Msh4-201ENSMUST00000005630 A2mQ6GQT1 1474 aa18.51■□□□□ 0.55
Msh4-201ENSMUST00000005630 UacaQ8CGB3 1411 aa18.5■□□□□ 0.55
Msh4-201ENSMUST00000005630 Magi3Q9EQJ9 1476 aa18.5■□□□□ 0.55
Msh4-201ENSMUST00000005630 EprsQ8CGC7 1512 aaKnown RBP18.5■□□□□ 0.55
Msh4-201ENSMUST00000005630 Ankrd36D3Z4K0 1415 aa18.49■□□□□ 0.55
Msh4-201ENSMUST00000005630 Rpap1Q80TE0 1409 aa18.49■□□□□ 0.55
Msh4-201ENSMUST00000005630 Lmtk2Q3TYD6 1471 aa18.48■□□□□ 0.55
Msh4-201ENSMUST00000005630 Gpatch8A2A6A1 1505 aa18.47■□□□□ 0.55
Msh4-201ENSMUST00000005630 Mia2Q91ZV0 1396 aa18.46■□□□□ 0.55
Msh4-201ENSMUST00000005630 Cul7Q8VE73 1689 aa18.46■□□□□ 0.55
Msh4-201ENSMUST00000005630 Setd1bQ8CFT2 1985 aa18.45■□□□□ 0.54
Msh4-201ENSMUST00000005630 Hspa5P20029 655 aaKnown RBP18.43■□□□□ 0.54
Msh4-201ENSMUST00000005630 CadpsQ80TJ1 1355 aa18.42■□□□□ 0.54
Msh4-201ENSMUST00000005630 Gcc2Q8CHG3 1679 aa18.42■□□□□ 0.54
Msh4-201ENSMUST00000005630 WizO88286 1684 aaKnown RBP18.41■□□□□ 0.54
Msh4-201ENSMUST00000005630 Adamts12Q811B3 1600 aa18.4■□□□□ 0.54
Msh4-201ENSMUST00000005630 Fhod3Q76LL6 1578 aa18.39■□□□□ 0.53
Msh4-201ENSMUST00000005630 Ccnb3Q810T2 1396 aa18.39■□□□□ 0.53
Msh4-201ENSMUST00000005630 Grin2aP35436 1464 aa18.38■□□□□ 0.53
Msh4-201ENSMUST00000005630 BC005561E9Q5E2 1589 aa18.37■□□□□ 0.53
Msh4-201ENSMUST00000005630 Mrc2Q64449 1479 aa18.36■□□□□ 0.53
Msh4-201ENSMUST00000005630 Mapk8ip2Q9ERE9 830 aa18.36■□□□□ 0.53
Msh4-201ENSMUST00000005630 NexmifQ5DTT1 1515 aa18.35■□□□□ 0.53
Msh4-201ENSMUST00000005630 Disp1Q3TDN0 1521 aa18.33■□□□□ 0.53
Msh4-201ENSMUST00000005630 Camsap2Q8C1B1 1461 aa18.33■□□□□ 0.52
Msh4-201ENSMUST00000005630 Ccer2J3QPU5 274 aa18.33■□□□□ 0.52
Msh4-201ENSMUST00000005630 Plb1Q3TTY0 1478 aa18.32■□□□□ 0.52
Msh4-201ENSMUST00000005630 Naip5Q9R016 1403 aa18.32■□□□□ 0.52
Msh4-201ENSMUST00000005630 Abca16E9PWJ7 1678 aa18.31■□□□□ 0.52
Msh4-201ENSMUST00000005630 NclP09405 707 aaKnown RBP18.31■□□□□ 0.52
Msh4-201ENSMUST00000005630 Aplp2Q06335 707 aa18.3■□□□□ 0.52
Msh4-201ENSMUST00000005630 PxdnQ3UQ28 1475 aa18.3■□□□□ 0.52
Msh4-201ENSMUST00000005630 Setbp1Q9Z180 1582 aa18.29■□□□□ 0.52
Msh4-201ENSMUST00000005630 Ncoa2Q61026 1462 aa18.29■□□□□ 0.52
Msh4-201ENSMUST00000005630 Soga1E1U8D0 1418 aa18.28■□□□□ 0.52
Msh4-201ENSMUST00000005630 Kif27Q7M6Z4 1394 aa18.27■□□□□ 0.52
Msh4-201ENSMUST00000005630 Chic2Q9D9G3 165 aa18.26■□□□□ 0.51
Msh4-201ENSMUST00000005630 Gm13697A2AK42 830 aa18.26■□□□□ 0.51
Msh4-201ENSMUST00000005630 Gm38655A0A286YDK6 273 aa18.22■□□□□ 0.51
Msh4-201ENSMUST00000005630 Hnrnpul2Q00PI9 745 aaKnown RBP18.22■□□□□ 0.51
Msh4-201ENSMUST00000005630 Kdm6bQ5NCY0 1641 aa18.22■□□□□ 0.51
Msh4-201ENSMUST00000005630 Dnajc5bQ9CQ94 199 aa18.21■□□□□ 0.51
Msh4-201ENSMUST00000005630 Pprc1Q6NZN1 1644 aa18.21■□□□□ 0.5
Msh4-201ENSMUST00000005630 Arhgef40Q3UPH7 1517 aa18.19■□□□□ 0.5
Msh4-201ENSMUST00000005630 Ncoa3O09000 1398 aa18.19■□□□□ 0.5
Msh4-201ENSMUST00000005630 Rfx7F8VPJ6 1459 aa18.18■□□□□ 0.5
Msh4-201ENSMUST00000005630 Cdc42bpaQ3UU96 1719 aa18.18■□□□□ 0.5
Msh4-201ENSMUST00000005630 SphkapQ6NSW3 1687 aa18.17■□□□□ 0.5
Msh4-201ENSMUST00000005630 Rapgef6Q5NCJ1 1609 aa18.17■□□□□ 0.5
Msh4-201ENSMUST00000005630 Znf710Q3U288 666 aa18.16■□□□□ 0.5
Msh4-201ENSMUST00000005630 Mug1P28665 1476 aa18.16■□□□□ 0.5
Msh4-201ENSMUST00000005630 Sin3aQ60520 1274 aaKnown RBP18.16■□□□□ 0.5
Msh4-201ENSMUST00000005630 Nup160Q9Z0W3 1402 aaKnown RBP18.16■□□□□ 0.5
Msh4-201ENSMUST00000005630 Abcc2Q8VI47 1543 aa18.15■□□□□ 0.5
Msh4-201ENSMUST00000005630 Abcc5Q9R1X5 1436 aa18.15■□□□□ 0.5
Msh4-201ENSMUST00000005630 Pbrm1Q8BSQ9 1634 aaKnown RBP18.15■□□□□ 0.5
Msh4-201ENSMUST00000005630 Arhgef11Q68FM7 1552 aa18.14■□□□□ 0.49
Msh4-201ENSMUST00000005630 WrnO09053 1401 aa18.13■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms