RNA–Protein interactions for RNA: ENST00000592737.5

NCLN-208, Transcript of nicalin, humanhuman

TSL 3

Gene NCLN, Length 2,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-208ENST00000592737 VSIG2Q96IQ7 327 aa12.52□□□□□ -0.41
NCLN-208ENST00000592737 ABCA2Q9BZC7 2435 aa12.52□□□□□ -0.41
NCLN-208ENST00000592737 TRGV11A0A075B6L2 103 aa12.52□□□□□ -0.41
NCLN-208ENST00000592737 A0A0U1RRA0 63 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 PRM2P04554 102 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 C10orf99Q6UWK7 81 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 SMIM20Q8N5G0 67 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 PYGO1Q9Y3Y4 419 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 IGHV4-61A0A0C4DH41 118 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 BRI3O95415 125 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 FAM104AQ969W3 186 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 YAE1D1Q9NRH1 226 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 Q9UF83 564 aa12.51□□□□□ -0.41
NCLN-208ENST00000592737 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.51□□□□□ -0.414e-7■■■■□ 21.9
NCLN-208ENST00000592737 LST1O00453 97 aa12.5□□□□□ -0.41
NCLN-208ENST00000592737 MEIG1Q5JSS6 88 aa12.5□□□□□ -0.41
NCLN-208ENST00000592737 TMEM61Q8N0U2 210 aa12.5□□□□□ -0.41
NCLN-208ENST00000592737 CHCHD5Q9BSY4 110 aa12.5□□□□□ -0.41
NCLN-208ENST00000592737 COL12A1Q99715 3063 aa12.5□□□□□ -0.41
NCLN-208ENST00000592737 IGHV3-38A0A0C4DH36 116 aa12.5□□□□□ -0.41
NCLN-208ENST00000592737 SYNJ2BPP57105 145 aa12.49□□□□□ -0.41
NCLN-208ENST00000592737 K7EQG2 157 aa12.49□□□□□ -0.41
NCLN-208ENST00000592737 IGF2RP11717 2491 aa12.49□□□□□ -0.41
NCLN-208ENST00000592737 C3orf56Q8N813 242 aa12.49□□□□□ -0.41
NCLN-208ENST00000592737 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
NCLN-208ENST00000592737 TINCRA0A1B0GVN0 87 aa12.48□□□□□ -0.41
NCLN-208ENST00000592737 ZNF625Q96I27 306 aaPredicted RBP12.48□□□□□ -0.41
NCLN-208ENST00000592737 LINC01600Q96MT4 127 aa12.48□□□□□ -0.41
NCLN-208ENST00000592737 VPS13CQ709C8 3753 aa12.48□□□□□ -0.41
NCLN-208ENST00000592737 HIVEP3Q5T1R4 2406 aa12.48□□□□□ -0.41
NCLN-208ENST00000592737 MUC6Q6W4X9 2439 aa12.47□□□□□ -0.41
NCLN-208ENST00000592737 PIMREGQ9BSJ6 248 aa12.46□□□□□ -0.41
NCLN-208ENST00000592737 RBMY1A1P0DJD3 496 aaKnown RBP12.46□□□□□ -0.41
NCLN-208ENST00000592737 RBMY1CP0DJD4 496 aa12.46□□□□□ -0.41
NCLN-208ENST00000592737 RBMY1FQ15415 496 aaKnown RBP12.46□□□□□ -0.41
NCLN-208ENST00000592737 CDKN2A-AS1Q9UH64 79 aa12.46□□□□□ -0.41
NCLN-208ENST00000592737 LINC00467Q9BRT7 94 aa12.46□□□□□ -0.42
NCLN-208ENST00000592737 UBE2D4Q9Y2X8 147 aa12.46□□□□□ -0.42
NCLN-208ENST00000592737 DGAT2L7PQ6IED9 249 aa12.45□□□□□ -0.42
NCLN-208ENST00000592737 CIRBPQ14011 172 aaKnown RBP12.45□□□□□ -0.42
NCLN-208ENST00000592737 Q6ZSN1 163 aa12.45□□□□□ -0.42
NCLN-208ENST00000592737 CHCHD7Q9BUK0 85 aa12.45□□□□□ -0.42
NCLN-208ENST00000592737 HERV-K104P63124 156 aa12.44□□□□□ -0.42
NCLN-208ENST00000592737 CFHR3Q02985 330 aa12.44□□□□□ -0.42
NCLN-208ENST00000592737 MRPL23Q16540 153 aaKnown RBP12.44□□□□□ -0.42
NCLN-208ENST00000592737 SPANXA1Q9NS26 97 aa12.44□□□□□ -0.42
NCLN-208ENST00000592737 MAP1AP78559 2803 aaPredicted RBP12.44□□□□□ -0.42
NCLN-208ENST00000592737 C19orf84I3L1E1 186 aa12.44□□□□□ -0.42
NCLN-208ENST00000592737 NACAE9PAV3 2078 aa12.43□□□□□ -0.42
NCLN-208ENST00000592737 PSMB8P28062 276 aa12.43□□□□□ -0.42
NCLN-208ENST00000592737 FAM240AA0A1B0GVK7 77 aa12.42□□□□□ -0.42
NCLN-208ENST00000592737 TMEM101Q96IK0 257 aa12.42□□□□□ -0.42
NCLN-208ENST00000592737 CITED2Q99967 270 aaPredicted RBP12.42□□□□□ -0.42
NCLN-208ENST00000592737 CSPG4Q6UVK1 2322 aa12.42□□□□□ -0.42
NCLN-208ENST00000592737 CREBBPQ92793 2442 aa12.42□□□□□ -0.42
NCLN-208ENST00000592737 Q9H8V8 135 aa12.41□□□□□ -0.42
NCLN-208ENST00000592737 DEFB131AP59861 70 aa12.41□□□□□ -0.42
NCLN-208ENST00000592737 FAM236AA0A1B0GUQ0 79 aa12.4□□□□□ -0.42
NCLN-208ENST00000592737 FAM236BA0A1B0GV22 79 aa12.4□□□□□ -0.42
NCLN-208ENST00000592737 NBL1P41271 181 aa12.4□□□□□ -0.42
NCLN-208ENST00000592737 NDUFA1O15239 70 aa12.39□□□□□ -0.43
NCLN-208ENST00000592737 IGHV4-59P01825 116 aa12.39□□□□□ -0.43
NCLN-208ENST00000592737 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
NCLN-208ENST00000592737 LINC00308Q8TCZ7 52 aa12.39□□□□□ -0.43
NCLN-208ENST00000592737 TIMM17BO60830 172 aa12.39□□□□□ -0.43
NCLN-208ENST00000592737 COX6A2Q02221 97 aa12.39□□□□□ -0.43
NCLN-208ENST00000592737 AVPP01185 164 aa12.38□□□□□ -0.43
NCLN-208ENST00000592737 LY6DQ14210 128 aa12.38□□□□□ -0.43
NCLN-208ENST00000592737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.38□□□□□ -0.43
NCLN-208ENST00000592737 IGHV4-30-2A0A087WSY4 118 aa12.38□□□□□ -0.43
NCLN-208ENST00000592737 MSMBP08118 114 aa12.38□□□□□ -0.43
NCLN-208ENST00000592737 ZNF415Q09FC8 603 aa12.38□□□□□ -0.43
NCLN-208ENST00000592737 SHISA2Q6UWI4 295 aa12.38□□□□□ -0.43
NCLN-208ENST00000592737 CCL19Q99731 98 aa12.38□□□□□ -0.43
NCLN-208ENST00000592737 FAM110AQ9BQ89 295 aa12.38□□□□□ -0.43
NCLN-208ENST00000592737 SPG11Q96JI7 2443 aa12.37□□□□□ -0.43
NCLN-208ENST00000592737 HOXD3P31249 432 aaPredicted RBP12.37□□□□□ -0.43
NCLN-208ENST00000592737 LINC01587Q99440 93 aa12.37□□□□□ -0.43
NCLN-208ENST00000592737 TRBV7-7A0A0K0K1E9 115 aa12.37□□□□□ -0.43
NCLN-208ENST00000592737 ATP5J2P56134 94 aa12.37□□□□□ -0.43
NCLN-208ENST00000592737 C10orf105Q8TEF2 133 aa12.37□□□□□ -0.43
NCLN-208ENST00000592737 EDA2RQ9HAV5 297 aa12.37□□□□□ -0.43
NCLN-208ENST00000592737 COX7A2LO14548 114 aa12.36□□□□□ -0.43
NCLN-208ENST00000592737 CRYBG3Q68DQ2 2970 aa12.36□□□□□ -0.43
NCLN-208ENST00000592737 UCNP55089 124 aa12.36□□□□□ -0.43
NCLN-208ENST00000592737 Q8N2B8 174 aa12.36□□□□□ -0.43
NCLN-208ENST00000592737 TRAV13-1A0A0B4J241 112 aa12.35□□□□□ -0.43
NCLN-208ENST00000592737 DAZ2Q13117 558 aaKnown RBP12.35□□□□□ -0.43
NCLN-208ENST00000592737 DAZ4Q86SG3 579 aaKnown RBP12.35□□□□□ -0.43
NCLN-208ENST00000592737 DAZ3Q9NR90 486 aaKnown RBP12.35□□□□□ -0.43
NCLN-208ENST00000592737 NDUFA7O95182 113 aa12.34□□□□□ -0.43
NCLN-208ENST00000592737 ACYP1P07311 99 aa12.34□□□□□ -0.43
NCLN-208ENST00000592737 DEFB112Q30KQ8 113 aa12.34□□□□□ -0.43
NCLN-208ENST00000592737 PRIMA1Q86XR5 153 aa12.34□□□□□ -0.43
NCLN-208ENST00000592737 TIRAPP58753 221 aa12.34□□□□□ -0.43
NCLN-208ENST00000592737 BAALC-AS2P0C853 105 aa12.33□□□□□ -0.44
NCLN-208ENST00000592737 RBMY1BA6NDE4 496 aaKnown RBP12.33□□□□□ -0.44
NCLN-208ENST00000592737 RBMY1EA6NEQ0 496 aaKnown RBP12.33□□□□□ -0.44
NCLN-208ENST00000592737 RBMY1DP0C7P1 496 aaKnown RBP12.33□□□□□ -0.44
NCLN-208ENST00000592737 DEFB136Q30KP8 78 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms