RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 DUX3Q96PT4 197 aa16.03■□□□□ 0.16
PSMA4-215ENST00000559934 C10orf99Q6UWK7 81 aa16.02■□□□□ 0.16
PSMA4-215ENST00000559934 SPANXDQ9BXN6 97 aa16.02■□□□□ 0.16
PSMA4-215ENST00000559934 SPANXCQ9NY87 97 aa16.02■□□□□ 0.16
PSMA4-215ENST00000559934 KLRB1Q12918 225 aa16.02■□□□□ 0.15
PSMA4-215ENST00000559934 MIAQ16674 131 aa16.02■□□□□ 0.15
PSMA4-215ENST00000559934 DAND5Q8N907 189 aa16.02■□□□□ 0.15
PSMA4-215ENST00000559934 IGHV4-61A0A0C4DH41 118 aa16.01■□□□□ 0.15
PSMA4-215ENST00000559934 VSIG2Q96IQ7 327 aa16■□□□□ 0.15
PSMA4-215ENST00000559934 PYGO1Q9Y3Y4 419 aa16■□□□□ 0.15
PSMA4-215ENST00000559934 PRM2P04554 102 aa16■□□□□ 0.15
PSMA4-215ENST00000559934 SNRPD3P62318 126 aaKnown RBP16■□□□□ 0.15
PSMA4-215ENST00000559934 KNCNA6PVL3 124 aa15.99■□□□□ 0.15
PSMA4-215ENST00000559934 CFHR3Q02985 330 aa15.99■□□□□ 0.15
PSMA4-215ENST00000559934 RBMY1A1P0DJD3 496 aaKnown RBP15.99■□□□□ 0.15
PSMA4-215ENST00000559934 RBMY1CP0DJD4 496 aa15.99■□□□□ 0.15
PSMA4-215ENST00000559934 RBMY1FQ15415 496 aaKnown RBP15.99■□□□□ 0.15
PSMA4-215ENST00000559934 K7EQG2 157 aa15.98■□□□□ 0.15
PSMA4-215ENST00000559934 COX6CP09669 75 aa15.98■□□□□ 0.15
PSMA4-215ENST00000559934 H3BT86 120 aa15.98■□□□□ 0.15
PSMA4-215ENST00000559934 TMEM61Q8N0U2 210 aa15.98■□□□□ 0.15
PSMA4-215ENST00000559934 NACAE9PAV3 2078 aa15.97■□□□□ 0.15
PSMA4-215ENST00000559934 LST1O00453 97 aa15.97■□□□□ 0.15
PSMA4-215ENST00000559934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.96■□□□□ 0.15
PSMA4-215ENST00000559934 IGKV2-29A2NJV5 120 aaPredicted RBP15.96■□□□□ 0.15
PSMA4-215ENST00000559934 CSPG4Q6UVK1 2322 aa15.96■□□□□ 0.15
PSMA4-215ENST00000559934 C19orf84I3L1E1 186 aa15.95■□□□□ 0.14
PSMA4-215ENST00000559934 Q6ZSN1 163 aa15.95■□□□□ 0.14
PSMA4-215ENST00000559934 DUX5Q96PT3 197 aa15.95■□□□□ 0.14
PSMA4-215ENST00000559934 TNFRSF18Q9Y5U5 241 aa15.95■□□□□ 0.14
PSMA4-215ENST00000559934 TRGV11A0A075B6L2 103 aa15.94■□□□□ 0.14
PSMA4-215ENST00000559934 TINCRA0A1B0GVN0 87 aa15.94■□□□□ 0.14
PSMA4-215ENST00000559934 CHCHD7Q9BUK0 85 aa15.94■□□□□ 0.14
PSMA4-215ENST00000559934 UBE2D4Q9Y2X8 147 aa15.93■□□□□ 0.14
PSMA4-215ENST00000559934 CREBBPQ92793 2442 aa15.92■□□□□ 0.14
PSMA4-215ENST00000559934 CELSR2Q9HCU4 2923 aa15.92■□□□□ 0.14
PSMA4-215ENST00000559934 PSMB8P28062 276 aa15.92■□□□□ 0.14
PSMA4-215ENST00000559934 SYNJ2BPP57105 145 aa15.92■□□□□ 0.14
PSMA4-215ENST00000559934 IGHV3-38A0A0C4DH36 116 aa15.92■□□□□ 0.14
PSMA4-215ENST00000559934 NBL1P41271 181 aa15.92■□□□□ 0.14
PSMA4-215ENST00000559934 LINC00467Q9BRT7 94 aa15.91■□□□□ 0.14
PSMA4-215ENST00000559934 CHCHD5Q9BSY4 110 aa15.91■□□□□ 0.14
PSMA4-215ENST00000559934 CDKN2A-AS1Q9UH64 79 aa15.91■□□□□ 0.14
PSMA4-215ENST00000559934 SPG11Q96JI7 2443 aa15.9■□□□□ 0.14
PSMA4-215ENST00000559934 CITED2Q99967 270 aaPredicted RBP15.9■□□□□ 0.14
PSMA4-215ENST00000559934 DEFB121Q5J5C9 76 aa15.89■□□□□ 0.13
PSMA4-215ENST00000559934 SMIM20Q8N5G0 67 aa15.89■□□□□ 0.13
PSMA4-215ENST00000559934 YAE1D1Q9NRH1 226 aa15.89■□□□□ 0.13
PSMA4-215ENST00000559934 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.89■□□□□ 0.13
PSMA4-215ENST00000559934 A0A0U1RRA0 63 aa15.88■□□□□ 0.13
PSMA4-215ENST00000559934 FAM240AA0A1B0GVK7 77 aa15.88■□□□□ 0.13
PSMA4-215ENST00000559934 MEIG1Q5JSS6 88 aa15.88■□□□□ 0.13
PSMA4-215ENST00000559934 C3orf56Q8N813 242 aa15.88■□□□□ 0.13
PSMA4-215ENST00000559934 EDA2RQ9HAV5 297 aa15.88■□□□□ 0.13
PSMA4-215ENST00000559934 AVPP01185 164 aa15.88■□□□□ 0.13
PSMA4-215ENST00000559934 MRPL23Q16540 153 aaKnown RBP15.88■□□□□ 0.13
PSMA4-215ENST00000559934 PIMREGQ9BSJ6 248 aa15.88■□□□□ 0.13
PSMA4-215ENST00000559934 SPANXA1Q9NS26 97 aa15.88■□□□□ 0.13
PSMA4-215ENST00000559934 ZNF625Q96I27 306 aaPredicted RBP15.87■□□□□ 0.13
PSMA4-215ENST00000559934 TMEM101Q96IK0 257 aa15.86■□□□□ 0.13
PSMA4-215ENST00000559934 TIMM17BO60830 172 aa15.84■□□□□ 0.13
PSMA4-215ENST00000559934 COX6A2Q02221 97 aa15.84■□□□□ 0.13
PSMA4-215ENST00000559934 IGHV4-59P01825 116 aa15.84■□□□□ 0.13
PSMA4-215ENST00000559934 NDUFA1O15239 70 aa15.83■□□□□ 0.13
PSMA4-215ENST00000559934 C10orf105Q8TEF2 133 aa15.83■□□□□ 0.13
PSMA4-215ENST00000559934 IGHV4-30-2A0A087WSY4 118 aa15.83■□□□□ 0.12
PSMA4-215ENST00000559934 TRBV7-7A0A0K0K1E9 115 aa15.82■□□□□ 0.12
PSMA4-215ENST00000559934 LINC00308Q8TCZ7 52 aa15.82■□□□□ 0.12
PSMA4-215ENST00000559934 RBMY1BA6NDE4 496 aaKnown RBP15.82■□□□□ 0.12
PSMA4-215ENST00000559934 RBMY1EA6NEQ0 496 aaKnown RBP15.82■□□□□ 0.12
PSMA4-215ENST00000559934 RBMY1DP0C7P1 496 aaKnown RBP15.82■□□□□ 0.12
PSMA4-215ENST00000559934 HERV-K104P63124 156 aa15.82■□□□□ 0.12
PSMA4-215ENST00000559934 Q9H8V8 135 aa15.82■□□□□ 0.12
PSMA4-215ENST00000559934 Q8N2B8 174 aa15.81■□□□□ 0.12
PSMA4-215ENST00000559934 DEFB131AP59861 70 aa15.81■□□□□ 0.12
PSMA4-215ENST00000559934 RNF152Q8N8N0 203 aa15.81■□□□□ 0.12
PSMA4-215ENST00000559934 MSMBP08118 114 aa15.8■□□□□ 0.12
PSMA4-215ENST00000559934 SMCR5Q8TEV8 140 aa15.8■□□□□ 0.12
PSMA4-215ENST00000559934 LY6DQ14210 128 aa15.8■□□□□ 0.12
PSMA4-215ENST00000559934 SOSTDC1Q6X4U4 206 aa15.8■□□□□ 0.12
PSMA4-215ENST00000559934 FAM110AQ9BQ89 295 aa15.8■□□□□ 0.12
PSMA4-215ENST00000559934 HOXD3P31249 432 aaPredicted RBP15.79■□□□□ 0.12
PSMA4-215ENST00000559934 FAM236AA0A1B0GUQ0 79 aa15.79■□□□□ 0.12
PSMA4-215ENST00000559934 FAM236BA0A1B0GV22 79 aa15.79■□□□□ 0.12
PSMA4-215ENST00000559934 SHISA2Q6UWI4 295 aa15.79■□□□□ 0.12
PSMA4-215ENST00000559934 NCOR2Q9Y618 2525 aa15.78■□□□□ 0.12
PSMA4-215ENST00000559934 IGHV3OR16-12A0A075B7B8 117 aa15.78■□□□□ 0.12
PSMA4-215ENST00000559934 IGLV5-45A0A087WSX0 123 aa15.78■□□□□ 0.12
PSMA4-215ENST00000559934 NDUFA7O95182 113 aa15.78■□□□□ 0.12
PSMA4-215ENST00000559934 CIRBPQ14011 172 aaKnown RBP15.78■□□□□ 0.12
PSMA4-215ENST00000559934 CSMD2Q7Z408 3487 aa15.77■□□□□ 0.12
PSMA4-215ENST00000559934 COX7A2LO14548 114 aa15.77■□□□□ 0.12
PSMA4-215ENST00000559934 TIRAPP58753 221 aa15.77■□□□□ 0.11
PSMA4-215ENST00000559934 DEFB112Q30KQ8 113 aa15.77■□□□□ 0.11
PSMA4-215ENST00000559934 DGAT2L7PQ6IED9 249 aa15.76■□□□□ 0.11
PSMA4-215ENST00000559934 CCL19Q99731 98 aa15.76■□□□□ 0.11
PSMA4-215ENST00000559934 ZNF415Q09FC8 603 aa15.76■□□□□ 0.11
PSMA4-215ENST00000559934 UCNP55089 124 aa15.75■□□□□ 0.11
PSMA4-215ENST00000559934 LINC01587Q99440 93 aa15.75■□□□□ 0.11
PSMA4-215ENST00000559934 CHD8Q9HCK8 2581 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms