RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 MGPP08493 103 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 HTN3P15516 51 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 GATA1P15976 413 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-212ENST00000554486 RAB4AP20338 218 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 MRPL51Q4U2R6 128 aaKnown RBP4.38□□□□□ -1.71
SCFD1-212ENST00000554486 FAM104BQ5XKR9 115 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 SMIM15Q7Z3B0 74 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 Q9UF83 564 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 STARD9Q9P2P6 4700 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 DEFB131BA0A096LNP1 70 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 TRAV26-2A0A0B4J265 109 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 TRGV4A0A0C4DH28 118 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 LOC100131303A0A0U1RQF7 123 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 M0QY20 66 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 TSHBP01222 138 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 P0DMU3 169 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 FAM231AP0DMU4 169 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 FAM231CP0DMU5 169 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 CRYBA4P53673 196 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 RAB4BP61018 213 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 SLAQ13239 276 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 ZNF56Q15929 161 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 PHLDA1Q8WV24 401 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-212ENST00000554486 VSIG2Q96IQ7 327 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 GNB1LQ9BYB4 327 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 HHLA3Q9XRX5 114 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 TENM2Q9NT68 2774 aa4.37□□□□□ -1.71
SCFD1-212ENST00000554486 TRAV10A0A0B4J240 114 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 K7EQD1 137 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 NCR2O95944 276 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 HLA-DQA1P01909 254 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 APCSP02743 223 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 RAB5AP20339 215 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 KIAA1644Q3SXP7 199 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 COX19Q49B96 90 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 SLC25A29Q8N8R3 303 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 MRAP2Q96G30 205 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 PRO0255Q9UI72 69 aa4.36□□□□□ -1.71
SCFD1-212ENST00000554486 TRAV26-1A0A087WT03 109 aa4.35□□□□□ -1.71
SCFD1-212ENST00000554486 A0A0J9YY99 117 aa4.35□□□□□ -1.71
SCFD1-212ENST00000554486 TRBV6-4A0A1B0GX49 114 aa4.35□□□□□ -1.71
SCFD1-212ENST00000554486 PHOX2AO14813 284 aa4.35□□□□□ -1.71
SCFD1-212ENST00000554486 MT-ND6P03923 174 aa4.35□□□□□ -1.71
SCFD1-212ENST00000554486 LINC00694P0DN24 101 aa4.35□□□□□ -1.71
SCFD1-212ENST00000554486 RPS10P46783 165 aaKnown RBP4.35□□□□□ -1.71
SCFD1-212ENST00000554486 FABP9Q0Z7S8 132 aa4.35□□□□□ -1.71
SCFD1-212ENST00000554486 FRZBQ92765 325 aa4.35□□□□□ -1.71
SCFD1-212ENST00000554486 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
SCFD1-212ENST00000554486 TRAPPC1Q9Y5R8 145 aa4.35□□□□□ -1.71
SCFD1-212ENST00000554486 PLECQ15149 4684 aaKnown RBP4.35□□□□□ -1.71
SCFD1-212ENST00000554486 LYSTQ99698 3801 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 DNAH6Q9C0G6 4158 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 TRBV10-1A0A0K0K1A3 114 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 D6R8Y8 96 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 NPYP01303 97 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 PPBPP02775 128 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 CKS2P33552 79 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 RHOHQ15669 191 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 CEMP1Q6PRD7 247 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-212ENST00000554486 ORMDL3Q8N138 153 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 PRELID3AQ96N28 172 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 PRADC1Q9BSG0 188 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 ALKBH7Q9BT30 221 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-212ENST00000554486 NIT2Q9NQR4 276 aa4.34□□□□□ -1.71
SCFD1-212ENST00000554486 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 TRBV7-3A0A075B6L6 115 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 A0A096LPF7 62 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 TRBV6-5A0A0K0K1A5 114 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 IGLL5B9A064 214 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 H3BNG1 76 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 H7C1H1 209 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 TRGC2P03986 189 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-212ENST00000554486 UBE2D3P61077 147 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 UBE2D2P62837 147 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 OR10J3Q5JRS4 329 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 ZFAND6Q6FIF0 208 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-212ENST00000554486 ZNRF2Q8NHG8 242 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 MUC7Q8TAX7 377 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 DNAJC30Q96LL9 226 aa4.33□□□□□ -1.72
SCFD1-212ENST00000554486 DNAH1Q9P2D7 4330 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 VPS13DQ5THJ4 4388 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 NUPR2A6NF83 97 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 PPP1R17O96001 155 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 SRIP30626 198 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 POLR2KP53803 58 aaKnown RBP4.32□□□□□ -1.72
SCFD1-212ENST00000554486 MRPL23Q16540 153 aaKnown RBP4.32□□□□□ -1.72
SCFD1-212ENST00000554486 NEGR1Q7Z3B1 354 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 TMEM70Q9BUB7 260 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 LAMTOR2Q9Y2Q5 125 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 ICOSQ9Y6W8 199 aa4.32□□□□□ -1.72
SCFD1-212ENST00000554486 IGLV2-18A0A075B6J9 118 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 IGHV3-38A0A0C4DH36 116 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 TRBV27A0A0K0K1C4 114 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 SDHAF1A6NFY7 115 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms