RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 NCOA2Q15596 1464 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CCDC141Q6ZP82 1450 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 PXDNQ92626 1479 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 FYCO1Q9BQS8 1478 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 SNRNP200O75643 2136 aaKnown RBP0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 LRP5O75197 1615 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CCDC180Q9P1Z9 1646 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CC2D2AQ9P2K1 1620 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 RBBP6Q7Z6E9 1792 aaKnown RBP0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 MYH8P13535 1937 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 MYH4Q9Y623 1939 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 TRBV7-3A0A075B6L6 115 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 TRBV7-1A0A0A6YYK4 115 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 TRAV12-3A0A0B4J271 114 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 NBDYA0A0U1RRE5 68 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 LOC101927531A0A1B0GV80 90 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 NUPR2A6NF83 97 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 H3BRM9 83 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 SYS1-DBNDD2H3BUS1 97 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CYB5AP00167 134 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CFDP00746 253 aaPredicted RBP0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 IGHV3-30P01768 117 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 IGHV3-30-5P0DP03 117 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 PIPP12273 146 aaPredicted RBP0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 KLKP1Q107X0 134 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 HEPN1Q6WQI6 88 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CASC2Q6XLA1 102 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 LINC00299Q6ZSB3 139 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 KRTAP19-3Q7Z4W3 81 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 VMO1Q7Z5L0 202 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 C18orf32Q8TCD1 76 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 PPDPFLQ8WWR9 84 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 S100A16Q96FQ6 103 aaKnown RBP0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 FAM167A-AS1Q96KT0 104 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 S100A13Q99584 98 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 TRGV9Q99603 122 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CYP4F30PQ9H0H9 118 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 ST20Q9HBF5 79 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 SMCO4Q9NRQ5 59 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 PLAC8Q9NZF1 115 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 MRPL36Q9P0J6 103 aaKnown RBP0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 RABAC1Q9UI14 185 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 AP4S1Q9Y587 144 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 SPCS1Q9Y6A9 102 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 PARP14Q460N5 1801 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 KIF13AQ9H1H9 1805 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 DAPK1P53355 1430 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CASP8AP2Q9UKL3 1982 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 DIP2BQ9P265 1576 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 COL24A1Q17RW2 1714 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 MON2Q7Z3U7 1717 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 KIAA1551Q9HCM1 1747 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 MARF1Q9Y4F3 1742 aaKnown RBP0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CDK5RAP2Q96SN8 1893 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 POLA1P09884 1462 aaPredicted RBP0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CDK12Q9NYV4 1490 aaPredicted RBP0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 SHANK2Q9UPX8 1470 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 CNTRLQ7Z7A1 2325 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 SHROOM2Q13796 1616 aa0.35□□□□□ -2.35
AC008539.1-201ENST00000507653 KIDINS220Q9ULH0 1771 aa0.34□□□□□ -2.35
AC008539.1-201ENST00000507653 ABCC3O15438 1527 aa0.34□□□□□ -2.35
AC008539.1-201ENST00000507653 EPRSP07814 1512 aaKnown RBP0.34□□□□□ -2.35
AC008539.1-201ENST00000507653 HMGXB3Q12766 1538 aa0.34□□□□□ -2.35
AC008539.1-201ENST00000507653 NEXMIFQ5QGS0 1516 aa0.34□□□□□ -2.35
AC008539.1-201ENST00000507653 TET3O43151 1660 aa0.34□□□□□ -2.35
AC008539.1-201ENST00000507653 USP54Q70EL1 1684 aa0.34□□□□□ -2.35
AC008539.1-201ENST00000507653 NUP98P52948 1817 aa0.34□□□□□ -2.35
AC008539.1-201ENST00000507653 FSIP2Q5CZC0 6907 aa0.34□□□□□ -2.35
AC008539.1-201ENST00000507653 PIGBOS1A0A0B4J2F0 54 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 TRBV10-1A0A0K0K1A3 114 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 TRBV10-3A0A0K0K1G6 114 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 TMEM30CPA0ZSE6 113 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 FAM223BA6NKX1 122 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 TMEM14DPA8MWL7 114 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 F2Z2F3 143 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 H3BUT2 72 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 ATOX1O00244 68 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 CITO14578 2027 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 BCE1O60756 84 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 CCL3L1P16619 93 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 PDE6GP18545 87 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 CLIP1P30622 1438 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 FAUP35544 74 aaKnown RBP0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 ADAMTS12P58397 1594 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 GNG11P61952 73 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 DEFA5Q01523 94 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 CHD3Q12873 2000 aaKnown RBP0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 DEFB121Q5J5C9 76 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 CFAP126Q5VTH2 177 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 EDC4Q6P2E9 1401 aaKnown RBP0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 ZNF818PQ6ZRF7 136 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 CYP2G1PQ6ZSU1 146 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 SUPT6HQ7KZ85 1726 aaKnown RBP0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 PPP1R1CQ8WVI7 109 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 DMAC1Q96GE9 116 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 Q96NJ1 140 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 PROK2Q9HC23 129 aa0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 NXT2Q9NPJ8 142 aaKnown RBP0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 BAZ1AQ9NRL2 1556 aaPredicted RBP0.34□□□□□ -2.36
AC008539.1-201ENST00000507653 NDUFA4L2Q9NRX3 87 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms