RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 APELAP0DMC3 54 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 CXCL6P80162 114 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 Q1T7F1 81 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 ESRGQ1W209 222 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 PRR9Q5T870 116 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 IGFL2Q6UWQ7 119 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 FAM104AQ969W3 186 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 ZNF625Q96I27 306 aaPredicted RBP4.32□□□□□ -1.72
LINC01340-201ENST00000504012 ORMDL1Q9P0S3 153 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 LINC00474Q9P2X8 69 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 SPRR3Q9UBC9 169 aa4.32□□□□□ -1.72
LINC01340-201ENST00000504012 CD28P10747 220 aa4.31□□□□□ -1.72
LINC01340-201ENST00000504012 CCL5P13501 91 aa4.31□□□□□ -1.72
LINC01340-201ENST00000504012 MIFP14174 115 aa4.31□□□□□ -1.72
LINC01340-201ENST00000504012 SAA4P35542 130 aa4.31□□□□□ -1.72
LINC01340-201ENST00000504012 PIK3CD-AS1Q5SR53 167 aa4.31□□□□□ -1.72
LINC01340-201ENST00000504012 LINC01356Q8N9X3 169 aa4.31□□□□□ -1.72
LINC01340-201ENST00000504012 ZNF580Q9UK33 172 aa4.31□□□□□ -1.72
LINC01340-201ENST00000504012 COL27A1Q8IZC6 1860 aaPredicted RBP4.3□□□□□ -1.72
LINC01340-201ENST00000504012 SVILO95425 2214 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 ZGRF1Q86YA3 2104 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 KLLNB2CW77 178 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 F5H697 171 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 F6UB75 175 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 TMEM256-PLSCR3K7ERE1 68 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 GNRH2O43555 120 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 CRPP02741 224 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 PRB4P10163 310 aaPredicted RBP4.3□□□□□ -1.72
LINC01340-201ENST00000504012 PDE6GP18545 87 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 SNRPD3P62318 126 aaKnown RBP4.3□□□□□ -1.72
LINC01340-201ENST00000504012 C15orf32Q32M92 178 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 ENHOQ6UWT2 76 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 SOSTDC1Q6X4U4 206 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 DEFB132Q7Z7B7 95 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 DEFB119Q8N690 84 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 PRSS33Q8NF86 280 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 HES7Q9BYE0 225 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 MOB4Q9Y3A3 225 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 KNL1Q8NG31 2342 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 PCNTO95613 3336 aa4.3□□□□□ -1.72
LINC01340-201ENST00000504012 LOC110117498A0A087WWA1 95 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 CCL21O00585 134 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 PRYO14603 147 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 PAX4O43316 350 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 Q6ZS52 159 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 MRPL55Q7Z7F7 128 aaKnown RBP4.29□□□□□ -1.72
LINC01340-201ENST00000504012 LINC01560Q8TB33 94 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 TM2D3Q9BRN9 247 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 DEFB127Q9H1M4 99 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 Q9HAA7 133 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 DPM3Q9P2X0 92 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 MALRD1Q5VYJ5 2156 aa4.29□□□□□ -1.72
LINC01340-201ENST00000504012 CCL4P13236 92 aa4.28□□□□□ -1.72
LINC01340-201ENST00000504012 MIR7-3HGQ8N6C7 128 aa4.28□□□□□ -1.72
LINC01340-201ENST00000504012 Q8N6K4 173 aa4.28□□□□□ -1.72
LINC01340-201ENST00000504012 CNEP1R1Q8N9A8 125 aa4.28□□□□□ -1.72
LINC01340-201ENST00000504012 RMI2Q96E14 147 aa4.28□□□□□ -1.72
LINC01340-201ENST00000504012 A0A087WYN8 130 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 IGHV3-16A0A0C4DH30 117 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 PLA2G1BP04054 148 aaKnown RBP4.27□□□□□ -1.73
LINC01340-201ENST00000504012 SS18Q15532 418 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 C9orf129Q5T035 196 aaKnown RBP4.27□□□□□ -1.73
LINC01340-201ENST00000504012 LYPD2Q6UXB3 125 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 Q6ZTC4 211 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 C9orf106Q8NAJ2 232 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 SMIM11BQ8TCY0 68 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 UBE2E2Q96LR5 201 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 CDKN2A-AS1Q9UH64 79 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 PLXNB1O43157 2135 aa4.27□□□□□ -1.73
LINC01340-201ENST00000504012 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 IGKV2-29A2NJV5 120 aaPredicted RBP4.26□□□□□ -1.73
LINC01340-201ENST00000504012 E7EQL1 145 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 NCR3O14931 201 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 LINC01565O15544 149 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 NDUFS5O43920 106 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 LY6G6DO95868 133 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 DAD1P61803 113 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 CCL17Q92583 94 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 MDFIQ99750 246 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 CHCHD7Q9BUK0 85 aa4.26□□□□□ -1.73
LINC01340-201ENST00000504012 IGKV2-28A0A075B6P5 120 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 LECT2O14960 151 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 IGKV2D-28P01615 120 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 FUSP35637 526 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC01340-201ENST00000504012 LINC01547P58512 204 aaPredicted RBP4.25□□□□□ -1.73
LINC01340-201ENST00000504012 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
LINC01340-201ENST00000504012 C9orf66Q5T8R8 295 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 MINOS1Q5TGZ0 78 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 LINC00337Q8N6G1 96 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 TMEM254Q8TBM7 123 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 RPL36ALQ969Q0 106 aaKnown RBP4.25□□□□□ -1.73
LINC01340-201ENST00000504012 BPESC1Q9GZL8 116 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 ARRDC1-AS1Q9H2J1 176 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 C11orf68Q9H3H3 251 aaKnown RBP4.25□□□□□ -1.73
LINC01340-201ENST00000504012 SNURFQ9Y675 71 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 S4R3C0 116 aa4.25□□□□□ -1.73
LINC01340-201ENST00000504012 MUC4Q99102 2169 aa4.24□□□□□ -1.73
LINC01340-201ENST00000504012 IGHV7-81A0A0B4J1V7 117 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms