RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 APOBP04114 4563 aaKnown RBP0.36□□□□□ -2.35
CPSF3-205ENST00000489629 CEP152O94986 1710 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 CPDO75976 1380 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 PAPPAQ13219 1627 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 A0A1W2PPM0 123 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 IFITM5A6NNB3 132 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 LY6G6CO95867 125 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 IGF2P01344 180 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 GYPBP06028 91 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 HLA-DRB4P13762 266 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 ADCYAP1P18509 176 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 ETV6P41212 452 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 ASIPP42127 132 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 FXYD3Q14802 87 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 RHOHQ15669 191 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 ZNF56Q15929 161 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 CCDC153Q494R4 210 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 CCSMST1Q4G0I0 132 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 MORN2Q502X0 79 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 C3orf62Q6ZUJ4 267 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 GSKIPQ9P0R6 139 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 METTL1Q9UBP6 276 aaKnown RBP0.36□□□□□ -2.35
CPSF3-205ENST00000489629 LSM2Q9Y333 95 aaKnown RBP0.36□□□□□ -2.35
CPSF3-205ENST00000489629 HLA-DRB4X5D2U9 266 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.36□□□□□ -2.35
CPSF3-205ENST00000489629 C10orf71Q711Q0 1435 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 CUL7Q14999 1698 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 FAT1Q14517 4588 aa0.36□□□□□ -2.35
CPSF3-205ENST00000489629 FANCAO15360 1455 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 AHCTF1Q8WYP5 2266 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 ASXL1Q8IXJ9 1541 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 BORCS7-ASMTA0A0B4J1R7 106 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 A0A0G2JMM0 328 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 CXorf51AA0A1B0GTR3 108 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 TMEM30CPA0ZSE6 113 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 M0R129 80 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 SULT1C4O75897 302 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 KRTAP2-3P0C7H8 128 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 IGLC6P0CF74 106 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 HIST1H1BP16401 226 aaKnown RBP0.35□□□□□ -2.35
CPSF3-205ENST00000489629 ASB16-AS1Q495Z4 193 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 CLLU1Q5K131 121 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 GLYATL3Q5SZD4 288 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 IDO2Q6ZQW0 420 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 SLC25A26Q70HW3 274 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 C5orf56Q8N8D9 126 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 OR4S1Q8NGB4 309 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 OR8J3Q8NGG0 315 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 AP1S3Q96PC3 154 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 KRTAP2-4Q9BYR9 128 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 ABCC5O15440 1437 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 PTPRGP23470 1445 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 SPTBN1Q01082 2364 aaKnown RBP0.35□□□□□ -2.35
CPSF3-205ENST00000489629 ALMS1Q8TCU4 4167 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 MAST1Q9Y2H9 1570 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 FAT2Q9NYQ8 4349 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 TIAM2Q8IVF5 1701 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 ANK3Q12955 4377 aaKnown RBP0.35□□□□□ -2.35
CPSF3-205ENST00000489629 MYO3AQ8NEV4 1616 aa0.35□□□□□ -2.35
CPSF3-205ENST00000489629 MUC22E2RYF6 1773 aaPredicted RBP0.34□□□□□ -2.35
CPSF3-205ENST00000489629 AKAP11Q9UKA4 1901 aa0.34□□□□□ -2.35
CPSF3-205ENST00000489629 PKHD1P08F94 4074 aa0.34□□□□□ -2.35
CPSF3-205ENST00000489629 KNTC1P50748 2209 aa0.34□□□□□ -2.35
CPSF3-205ENST00000489629 ABCC2Q92887 1545 aa0.34□□□□□ -2.35
CPSF3-205ENST00000489629 CROCC2H7BZ55 1655 aa0.34□□□□□ -2.35
CPSF3-205ENST00000489629 ABCA1O95477 2261 aa0.34□□□□□ -2.35
CPSF3-205ENST00000489629 FAM236AA0A1B0GUQ0 79 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 FAM236BA0A1B0GV22 79 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 DISP2A7MBM2 1401 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 TPST1O60507 370 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 PITX3O75364 302 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 LINC00694P0DN24 101 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 KDELR1P24390 212 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 SPINT3P49223 89 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 LELP1Q5T871 98 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 XAF1Q6GPH4 301 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 UBR1Q8IWV7 1749 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 SLC35B3Q9H1N7 401 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 MRPL35Q9NZE8 188 aaKnown RBP0.34□□□□□ -2.36
CPSF3-205ENST00000489629 CADP27708 2225 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 RGPD8O14715 1765 aaPredicted RBP0.34□□□□□ -2.36
CPSF3-205ENST00000489629 RGPD5Q99666 1765 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 LRRC9Q6ZRR7 1453 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 PXDNQ92626 1479 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 NRXN1Q9ULB1 1477 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 TRRAPQ9Y4A5 3859 aa0.34□□□□□ -2.36
CPSF3-205ENST00000489629 IQGAP1P46940 1657 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 PLCH1Q4KWH8 1693 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 UGGT2Q9NYU1 1516 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 LYSTQ99698 3801 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 RICTORQ6R327 1708 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 ASXL3Q9C0F0 2248 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 ADGRB1O14514 1584 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 GLI2P10070 1586 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 DNAH5Q8TE73 4624 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 TRAV17A0A0B4J275 112 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 SMIM24O75264 130 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 CCKP06307 115 aa0.33□□□□□ -2.36
CPSF3-205ENST00000489629 DBIP07108 87 aaKnown RBP0.33□□□□□ -2.36
CPSF3-205ENST00000489629 CAV3P56539 151 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms