RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 FAM223AQ8IWN6 122 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 DMAC1Q96GE9 116 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 LINC01600Q96MT4 127 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 LIMD2Q9BT23 127 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 GPR179Q6PRD1 2367 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 TRIOBPQ9H2D6 2365 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 CDK13Q14004 1512 aaKnown RBP2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 ABCC2Q92887 1545 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 MADDQ8WXG6 1647 aa2.46□□□□□ -2.02
PRPF40A-206ENST00000471167 SETBP1Q9Y6X0 1596 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 NUPR2A6NF83 97 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 SDHAF1A6NFY7 115 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 TMEM170BQ5T4T1 132 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 LINC00643Q86TS7 51 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 KCPQ6ZWJ8 1503 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 CUL9Q8IWT3 2517 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 TOP2BQ02880 1626 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 NUMA1Q14980 2115 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 IQSEC2Q5JU85 1478 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 NRXN1Q9ULB1 1477 aa2.45□□□□□ -2.02
PRPF40A-206ENST00000471167 MICAL3Q7RTP6 2002 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 CUX1P39880 1505 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 EXPH5Q8NEV8 1989 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 TRBV6-8A0A0A6YYG3 113 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 C7orf77A4D0Y5 90 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 SMIM13P0DJ93 91 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 PATE1Q8WXA2 126 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 CACNA1DQ01668 2161 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 LTBP2Q14767 1821 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 ADAMTS7Q9UKP4 1686 aa2.44□□□□□ -2.02
PRPF40A-206ENST00000471167 UBR1Q8IWV7 1749 aa2.43□□□□□ -2.02
PRPF40A-206ENST00000471167 TRBV25-1A0A075B6N4 114 aa2.43□□□□□ -2.02
PRPF40A-206ENST00000471167 A0A087WWC5 75 aa2.43□□□□□ -2.02
PRPF40A-206ENST00000471167 A0A0G2JQZ4 141 aa2.43□□□□□ -2.02
PRPF40A-206ENST00000471167 UMAD1C9J7I0 102 aa2.43□□□□□ -2.02
PRPF40A-206ENST00000471167 ZNF56Q15929 161 aa2.43□□□□□ -2.02
PRPF40A-206ENST00000471167 KRTAP13-2Q52LG2 175 aa2.43□□□□□ -2.02
PRPF40A-206ENST00000471167 KIF21AQ7Z4S6 1674 aa2.43□□□□□ -2.02
PRPF40A-206ENST00000471167 EFCAB5A4FU69 1503 aa2.42□□□□□ -2.02
PRPF40A-206ENST00000471167 COL4A6Q14031 1691 aa2.42□□□□□ -2.02
PRPF40A-206ENST00000471167 IGKV3-7A0A075B6H7 116 aa2.42□□□□□ -2.02
PRPF40A-206ENST00000471167 A0A0J9YY99 117 aa2.42□□□□□ -2.02
PRPF40A-206ENST00000471167 TMEM14DPA8MWL7 114 aa2.42□□□□□ -2.02
PRPF40A-206ENST00000471167 DYNLRB1Q9NP97 96 aa2.42□□□□□ -2.02
PRPF40A-206ENST00000471167 CCDC180Q9P1Z9 1646 aa2.42□□□□□ -2.02
PRPF40A-206ENST00000471167 STRCP1A6NGW2 1772 aa2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 IGKV1-17P01599 117 aa2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 ELOF1P60002 83 aaKnown RBP2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 TPRXLQ17RH7 258 aa2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 CDC42SE2Q9NRR3 84 aa2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 NDUFA4L2Q9NRX3 87 aa2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 MPDZO75970 2070 aa2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 MYOFQ9NZM1 2061 aa2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 LMTK2Q8IWU2 1503 aa2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 HEATR1Q9H583 2144 aaKnown RBP2.41□□□□□ -2.02
PRPF40A-206ENST00000471167 RP1P56715 2156 aa2.4□□□□□ -2.02
PRPF40A-206ENST00000471167 MED13Q9UHV7 2174 aa2.4□□□□□ -2.02
PRPF40A-206ENST00000471167 LRRC9Q6ZRR7 1453 aa2.4□□□□□ -2.02
PRPF40A-206ENST00000471167 A0A087WXM4 84 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 TRBV6-7A0A0A0MS04 114 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 CLPSL1A2RUU4 121 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 ZNF815PA8K554 130 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 F8WEM9 126 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 PPYP01298 95 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 HMGN2P05204 90 aaKnown RBP2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 SSBP1Q04837 148 aaKnown RBP2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 KRTAP13-1Q8IUC0 172 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 C20orf197Q8N268 126 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 TVP23CQ96ET8 276 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 RGPD8O14715 1765 aaPredicted RBP2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 RGPD2P0DJD1 1756 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 RGPD5Q99666 1765 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 COL4A5P29400 1685 aa2.4□□□□□ -2.03
PRPF40A-206ENST00000471167 ZGRF1Q86YA3 2104 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 PREX2Q70Z35 1606 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 HMGXB3Q12766 1538 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 NEXMIFQ5QGS0 1516 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 DLG5Q8TDM6 1919 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 TRBV6-4A0A1B0GX49 114 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 HIGD1CA8MV81 97 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 HMGN4O00479 90 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 IGHV3-30P01768 117 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 IGHV3-30-5P0DP03 117 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 PSMG4Q5JS54 123 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 TMEM14BQ9NUH8 114 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 LENEPQ9Y5L5 61 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 MED12LQ86YW9 2145 aa2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 TARBP1Q13395 1621 aaKnown RBP2.39□□□□□ -2.03
PRPF40A-206ENST00000471167 KDM3BQ7LBC6 1761 aa2.38□□□□□ -2.03
PRPF40A-206ENST00000471167 ZNF142P52746 1687 aaPredicted RBP2.38□□□□□ -2.03
PRPF40A-206ENST00000471167 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
PRPF40A-206ENST00000471167 LOC285095A0A1B0GVY8 99 aa2.38□□□□□ -2.03
PRPF40A-206ENST00000471167 IQCF6A8MYZ5 107 aa2.38□□□□□ -2.03
PRPF40A-206ENST00000471167 PPP1R17O96001 155 aa2.38□□□□□ -2.03
PRPF40A-206ENST00000471167 XAF1Q6GPH4 301 aa2.38□□□□□ -2.03
PRPF40A-206ENST00000471167 V9GYH0 126 aa2.38□□□□□ -2.03
PRPF40A-206ENST00000471167 DIP2CQ9Y2E4 1556 aa2.37□□□□□ -2.03
PRPF40A-206ENST00000471167 MYMXA0A1B0GTQ4 84 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms