RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 NDUFA2O43678 99 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 SPINK1P00995 79 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 APODP05090 189 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 GCHFRP30047 84 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 COX6A2Q02221 97 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 SMCO1Q147U7 214 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 Q5BKY6 102 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 MMGT1Q8N4V1 131 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 SPTSSAQ969W0 71 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 MAGOHBQ96A72 148 aaKnown RBP-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 DPH3Q96FX2 82 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 PFDN5Q99471 154 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 WFDC6Q9BQY6 131 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 VPS25Q9BRG1 176 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 NPVFQ9HCQ7 196 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 ERG28Q9UKR5 140 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 LINC00312Q9Y6C7 94 aa-0.01□□□□□ -2.41
PTPN22-203ENST00000460620 WNK1Q9H4A3 2382 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 SCN7AQ01118 1682 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 KIF21AQ7Z4S6 1674 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 GOLGA4Q13439 2230 aaKnown RBP-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 UNC13BO14795 1591 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 STAB2Q8WWQ8 2551 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 CDK13Q14004 1512 aaKnown RBP-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 MYOM3Q5VTT5 1437 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 TRAV2A0A0B4J234 112 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 YPEL1O60688 119 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 NDUFB6O95139 128 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 PPP1R17O96001 155 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 PIPP12273 146 aaPredicted RBP-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 ARPC4P59998 168 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 CFAP126Q5VTH2 177 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 KCNRGQ8N5I3 272 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 Q8N8P6 123 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 FAM213BQ8TBF2 198 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 PDCD10Q9BUL8 212 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 AGPAT4-IT1Q9H0P7 198 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 SAR1AQ9NR31 198 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 SCN3BQ9NY72 215 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 PRO0255Q9UI72 69 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 PPRC1Q5VV67 1664 aaKnown RBP-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 CSMD3Q7Z407 3707 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 LRP6O75581 1613 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 VWFP04275 2813 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 PDCD11Q14690 1871 aaKnown RBP-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 MRC1P22897 1456 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 MBD5Q9P267 1494 aa-0.02□□□□□ -2.41
PTPN22-203ENST00000460620 TMEM2Q9UHN6 1383 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 QRICH2Q9H0J4 1663 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 SHROOM2Q13796 1616 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 BIVM-ERCC5R4GMW8 1640 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 TRAV13-2A0A0B4J235 113 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 TRBV10-3A0A0K0K1G6 114 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 CTXND1A0A1B0GTU2 59 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 MIF4GDA9UHW6 222 aaKnown RBP-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 FAM25AB3EWG3 89 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 FAM25CB3EWG5 89 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 FAM25GB3EWG6 89 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 APOC4-APOC2K7ER74 178 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 BCE1O60756 84 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 IFITM1P13164 125 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 CBLN1P23435 193 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 MEIG1Q5JSS6 88 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 C10orf128Q5T292 105 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 BAGE3Q86Y29 109 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 NDUFA11Q86Y39 141 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 UBE2DNLQ8IWF7 75 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 CNFNQ9BYD5 112 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 LINC00470Q9BZP3 86 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 LINC00474Q9P2X8 69 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 U3KQA8 63 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 SPTA1P02549 2419 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 HIVEP1P15822 2718 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 FLNCQ14315 2725 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 ZNF518AQ6AHZ1 1483 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 COL6A5A8TX70 2615 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 MYCBP2O75592 4640 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 DNAJC13O75165 2243 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 LRRC37A3O60309 1634 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 CC2D2AQ9P2K1 1620 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 FAT2Q9NYQ8 4349 aa-0.03□□□□□ -2.41
PTPN22-203ENST00000460620 ARHGEF5Q12774 1597 aa-0.03□□□□□ -2.42
PTPN22-203ENST00000460620 ATRQ13535 2644 aa-0.03□□□□□ -2.42
PTPN22-203ENST00000460620 HSPG2P98160 4391 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 PKD1L1Q8TDX9 2849 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 FXYD6-FXYD2A0A087WZ82 144 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 TRAV22A0A0B4J277 110 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 A0A1B0GV90 55 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 MCRIP1C9JLW8 97 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 M0R135 149 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 NCR2O95944 276 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 CFDP00746 253 aaPredicted RBP-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 IFNA17P01571 189 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 PRM1P04553 51 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 GUCA1AP43080 201 aaPredicted RBP-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 CCL18P55774 89 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 CCL8P80075 99 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 SPAG11BQ08648 103 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 CATR1Q13166 79 aa-0.04□□□□□ -2.42
PTPN22-203ENST00000460620 CCDC58Q4VC31 144 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms