RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 UBE2D3P61077 147 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 UBE2D2P62837 147 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 SEC11AP67812 179 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 KRTAP21-3Q3LHN1 58 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 FAM213BQ8TBF2 198 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 DYNLRB1Q9NP97 96 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 NDUFA4L2Q9NRX3 87 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 R4GMQ9 66 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 MED14O60244 1454 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 MRC1P22897 1456 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 TET1Q8NFU7 2136 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 TANC1Q9C0D5 1861 aa0.65□□□□□ -2.31
TRAJ39-201ENST00000390498 TOP2BQ02880 1626 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 ARFGEF1Q9Y6D6 1849 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 DLG5Q8TDM6 1919 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 TRAV22A0A0B4J277 110 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 TRBV7-7A0A0K0K1E9 115 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 CHKB-CPT1BH3BT56 60 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 SFT2D2O95562 160 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 GYPAP02724 150 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 CCL18P55774 89 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 KRTAP12-4P60329 112 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 SPAG11BQ08648 103 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 SPINK13Q1W4C9 94 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 Q5VV11 94 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 SPAG11AQ6PDA7 123 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 AMELXQ99217 191 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 TRGV9Q99603 122 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 WFDC6Q9BQY6 131 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 MANBALQ9NQG1 85 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 CDC42SE2Q9NRR3 84 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 FAIMQ9NVQ4 179 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 PRO1854Q9UHT4 67 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 V9GYH0 126 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 CCDC18Q5T9S5 1454 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 PLEKHH2Q8IVE3 1493 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 MLH3Q9UHC1 1453 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 LOC285556D6RIA3 1793 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 TCHHQ07283 1943 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 EHBP1L1Q8N3D4 1523 aa0.64□□□□□ -2.31
TRAJ39-201ENST00000390498 FANCAO15360 1455 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 A0A096LNT2 108 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 HMGN4O00479 90 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 ANGP03950 147 aaKnown RBP0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 LYNX1P0DP58 116 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 KRTAP12-3P60328 96 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 LCE3AQ5TA76 89 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 BAGE3Q86Y29 109 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 Q8N6K4 173 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 SERP2Q8N6R1 65 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 Q96NJ1 140 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 CACFD1Q9UGQ2 172 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 MAP2P11137 1827 aaKnown RBP0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 EPRSP07814 1512 aaKnown RBP0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 CEP162Q5TB80 1403 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 CACNA1BQ00975 2339 aa0.63□□□□□ -2.31
TRAJ39-201ENST00000390498 SPAG17Q6Q759 2223 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 KDM5AP29375 1690 aaKnown RBP0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 CLTCQ00610 1675 aaKnown RBP0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 ARHGEF5Q12774 1597 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 PSME4Q14997 1843 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 SBF2Q86WG5 1849 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 MED12Q93074 2177 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 TRGV1A0A0A0MS02 117 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 TMEM14DPA8MWL7 114 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 SYS1-DBNDD2H3BUS1 97 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 K7EP34 96 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 APOC3P02656 99 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 PRB1P04280 392 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 TRAPPC2P0DI81 140 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 TRAPPC2BP0DI82 140 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 PYY3Q5JQD4 70 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 TMEM170BQ5T4T1 132 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 Q6ZSA8 131 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 VMO1Q7Z5L0 202 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 LCN9Q8WX39 176 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 PLAC4Q8WY50 150 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 NPVFQ9HCQ7 196 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 PRRC2BQ5JSZ5 2229 aaKnown RBP0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 HMGXB3Q12766 1538 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 COL4A6Q14031 1691 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 UNC13BO14795 1591 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 HIVEP2P31629 2446 aa0.62□□□□□ -2.31
TRAJ39-201ENST00000390498 ATP10BO94823 1461 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 ARHGAP35Q9NRY4 1499 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 MON2Q7Z3U7 1717 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 IFT172Q9UG01 1749 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 KIAA0100Q14667 2235 aaKnown RBP0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 SNRNP200O75643 2136 aaKnown RBP0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 CDK13Q14004 1512 aaKnown RBP0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 UQCRHLA0A096LP55 91 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 TRAV1-2A0A0B4J238 106 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 CTXND1A0A1B0GTU2 59 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 IGLC7A0M8Q6 106 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 F2Z2F3 143 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 F8VRH5 84 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 H7BZZ5 65 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 K7EIL1 84 aa0.61□□□□□ -2.31
TRAJ39-201ENST00000390498 M0R135 149 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms