RNA–Protein interactions for RNA: ENST00000374946.7

TMEM235-201, Transcript of transmembrane protein 235, humanhuman

TSL 5 BASIC

Gene TMEM235, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-201ENST00000374946 SORL1Q92673 2214 aa14.12□□□□□ -0.15
TMEM235-201ENST00000374946 COX6CP09669 75 aa14.12□□□□□ -0.15
TMEM235-201ENST00000374946 NDUFA12Q9UI09 145 aa14.12□□□□□ -0.15
TMEM235-201ENST00000374946 NPC2P61916 151 aa14.11□□□□□ -0.15
TMEM235-201ENST00000374946 IGHV1OR15-1A0A075B7D0 117 aa14.11□□□□□ -0.15
TMEM235-201ENST00000374946 IGHV1-58A0A0C4DH39 117 aa14.11□□□□□ -0.15
TMEM235-201ENST00000374946 CEMP1Q6PRD7 247 aaPredicted RBP14.11□□□□□ -0.15
TMEM235-201ENST00000374946 PYGO1Q9Y3Y4 419 aa14.1□□□□□ -0.15
TMEM235-201ENST00000374946 MIAQ16674 131 aa14.1□□□□□ -0.15
TMEM235-201ENST00000374946 RNASE13Q5GAN3 156 aaKnown RBP14.1□□□□□ -0.15
TMEM235-201ENST00000374946 CSMD2Q7Z408 3487 aa14.09□□□□□ -0.15
TMEM235-201ENST00000374946 USP9XQ93008 2570 aaPredicted RBP14.09□□□□□ -0.15
TMEM235-201ENST00000374946 DOPEY2Q9Y3R5 2298 aa14.09□□□□□ -0.15
TMEM235-201ENST00000374946 A8MZ25 164 aa14.09□□□□□ -0.15
TMEM235-201ENST00000374946 BLCAPP62952 87 aa14.09□□□□□ -0.15
TMEM235-201ENST00000374946 DUX3Q96PT4 197 aa14.09□□□□□ -0.15
TMEM235-201ENST00000374946 MRPL23Q16540 153 aaKnown RBP14.09□□□□□ -0.15
TMEM235-201ENST00000374946 SPINK13Q1W4C9 94 aa14.09□□□□□ -0.15
TMEM235-201ENST00000374946 K7EMT4 169 aa14.08□□□□□ -0.16
TMEM235-201ENST00000374946 LST1O00453 97 aa14.08□□□□□ -0.16
TMEM235-201ENST00000374946 IGLV1-40P01703 118 aa14.07□□□□□ -0.16
TMEM235-201ENST00000374946 VSIG2Q96IQ7 327 aa14.07□□□□□ -0.16
TMEM235-201ENST00000374946 ACACBO00763 2458 aa14.07□□□□□ -0.16
TMEM235-201ENST00000374946 FAM240AA0A1B0GVK7 77 aa14.06□□□□□ -0.16
TMEM235-201ENST00000374946 TMEM61Q8N0U2 210 aa14.06□□□□□ -0.16
TMEM235-201ENST00000374946 H3BUX3 64 aa14.06□□□□□ -0.16
TMEM235-201ENST00000374946 DEFB121Q5J5C9 76 aa14.06□□□□□ -0.16
TMEM235-201ENST00000374946 IGHV3-73A0A0B4J1V6 119 aa14.05□□□□□ -0.16
TMEM235-201ENST00000374946 SMIM20Q8N5G0 67 aa14.05□□□□□ -0.16
TMEM235-201ENST00000374946 TRGV11A0A075B6L2 103 aa14.04□□□□□ -0.16
TMEM235-201ENST00000374946 PROK1P58294 105 aa14.04□□□□□ -0.16
TMEM235-201ENST00000374946 MYO18BQ8IUG5 2567 aa14.04□□□□□ -0.16
TMEM235-201ENST00000374946 A6NDX4 124 aa14.03□□□□□ -0.16
TMEM235-201ENST00000374946 IGHV4-38-2P0DP08 117 aa14.03□□□□□ -0.16
TMEM235-201ENST00000374946 SNRPD3P62318 126 aaKnown RBP14.03□□□□□ -0.16
TMEM235-201ENST00000374946 MEIG1Q5JSS6 88 aa14.03□□□□□ -0.16
TMEM235-201ENST00000374946 FAM110AQ9BQ89 295 aa14.03□□□□□ -0.16
TMEM235-201ENST00000374946 TINCRA0A1B0GVN0 87 aa14.03□□□□□ -0.16
TMEM235-201ENST00000374946 ZFYVE26Q68DK2 2539 aa14.02□□□□□ -0.16
TMEM235-201ENST00000374946 CHCHD5Q9BSY4 110 aa14.02□□□□□ -0.16
TMEM235-201ENST00000374946 YAE1D1Q9NRH1 226 aa14.02□□□□□ -0.16
TMEM235-201ENST00000374946 SPANXA1Q9NS26 97 aa14.02□□□□□ -0.16
TMEM235-201ENST00000374946 DAND5Q8N907 189 aa14.02□□□□□ -0.17
TMEM235-201ENST00000374946 NACAE9PAV3 2078 aa14.01□□□□□ -0.17
TMEM235-201ENST00000374946 CENPEQ02224 2701 aa14.01□□□□□ -0.17
TMEM235-201ENST00000374946 TRBV7-7A0A0K0K1E9 115 aa14.01□□□□□ -0.17
TMEM235-201ENST00000374946 HERV-K104P63124 156 aa14.01□□□□□ -0.17
TMEM235-201ENST00000374946 K7EQG2 157 aa14□□□□□ -0.17
TMEM235-201ENST00000374946 CFHR3Q02985 330 aa14□□□□□ -0.17
TMEM235-201ENST00000374946 EDA2RQ9HAV5 297 aa14□□□□□ -0.17
TMEM235-201ENST00000374946 Q9UF83 564 aa14□□□□□ -0.17
TMEM235-201ENST00000374946 TNFRSF18Q9Y5U5 241 aa14□□□□□ -0.17
TMEM235-201ENST00000374946 DOPEY1Q5JWR5 2465 aa14□□□□□ -0.17
TMEM235-201ENST00000374946 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.99□□□□□ -0.17
TMEM235-201ENST00000374946 UBE2D4Q9Y2X8 147 aa13.99□□□□□ -0.17
TMEM235-201ENST00000374946 TIMM17BO60830 172 aa13.99□□□□□ -0.17
TMEM235-201ENST00000374946 HTN1P15515 57 aa13.99□□□□□ -0.17
TMEM235-201ENST00000374946 TMEM95Q3KNT9 176 aa13.99□□□□□ -0.17
TMEM235-201ENST00000374946 CHCHD7Q9BUK0 85 aa13.99□□□□□ -0.17
TMEM235-201ENST00000374946 SHISA2Q6UWI4 295 aa13.98□□□□□ -0.17
TMEM235-201ENST00000374946 CITED2Q99967 270 aaPredicted RBP13.98□□□□□ -0.17
TMEM235-201ENST00000374946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.97□□□□□ -0.17
TMEM235-201ENST00000374946 IGKV2-29A2NJV5 120 aaPredicted RBP13.97□□□□□ -0.17
TMEM235-201ENST00000374946 RBMY1A1P0DJD3 496 aaKnown RBP13.97□□□□□ -0.17
TMEM235-201ENST00000374946 RBMY1CP0DJD4 496 aa13.97□□□□□ -0.17
TMEM235-201ENST00000374946 RBMY1FQ15415 496 aaKnown RBP13.97□□□□□ -0.17
TMEM235-201ENST00000374946 KNCNA6PVL3 124 aa13.96□□□□□ -0.17
TMEM235-201ENST00000374946 TMEM101Q96IK0 257 aa13.95□□□□□ -0.18
TMEM235-201ENST00000374946 CDKN2A-AS1Q9UH64 79 aa13.95□□□□□ -0.18
TMEM235-201ENST00000374946 USP24Q9UPU5 2620 aa13.95□□□□□ -0.18
TMEM235-201ENST00000374946 Q6ZSN1 163 aa13.95□□□□□ -0.18
TMEM235-201ENST00000374946 IGHV4-61A0A0C4DH41 118 aa13.94□□□□□ -0.18
TMEM235-201ENST00000374946 DUX5Q96PT3 197 aa13.94□□□□□ -0.18
TMEM235-201ENST00000374946 NDUFA1O15239 70 aa13.94□□□□□ -0.18
TMEM235-201ENST00000374946 PSMB8P28062 276 aa13.94□□□□□ -0.18
TMEM235-201ENST00000374946 C3orf56Q8N813 242 aa13.94□□□□□ -0.18
TMEM235-201ENST00000374946 LINC00467Q9BRT7 94 aa13.94□□□□□ -0.18
TMEM235-201ENST00000374946 ZANQ9Y493 2812 aa13.94□□□□□ -0.18
TMEM235-201ENST00000374946 C10orf99Q6UWK7 81 aa13.93□□□□□ -0.18
TMEM235-201ENST00000374946 PRM2P04554 102 aa13.93□□□□□ -0.18
TMEM235-201ENST00000374946 RNF152Q8N8N0 203 aa13.93□□□□□ -0.18
TMEM235-201ENST00000374946 POLQO75417 2590 aa13.92□□□□□ -0.18
TMEM235-201ENST00000374946 FAM236AA0A1B0GUQ0 79 aa13.92□□□□□ -0.18
TMEM235-201ENST00000374946 FAM236BA0A1B0GV22 79 aa13.92□□□□□ -0.18
TMEM235-201ENST00000374946 LINC01587Q99440 93 aa13.92□□□□□ -0.18
TMEM235-201ENST00000374946 CREBBPQ92793 2442 aa13.92□□□□□ -0.18
TMEM235-201ENST00000374946 ACYP1P07311 99 aa13.92□□□□□ -0.18
TMEM235-201ENST00000374946 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.92□□□□□ -0.18
TMEM235-201ENST00000374946 LINC00308Q8TCZ7 52 aa13.92□□□□□ -0.18
TMEM235-201ENST00000374946 CSPG4Q6UVK1 2322 aa13.91□□□□□ -0.18
TMEM235-201ENST00000374946 CIRBPQ14011 172 aaKnown RBP13.91□□□□□ -0.18
TMEM235-201ENST00000374946 IGHV3-38A0A0C4DH36 116 aa13.91□□□□□ -0.18
TMEM235-201ENST00000374946 FBN2P35556 2912 aa13.9□□□□□ -0.18
TMEM235-201ENST00000374946 COX7A2LO14548 114 aa13.9□□□□□ -0.18
TMEM235-201ENST00000374946 SYNJ2BPP57105 145 aa13.9□□□□□ -0.18
TMEM235-201ENST00000374946 SMCR5Q8TEV8 140 aa13.9□□□□□ -0.18
TMEM235-201ENST00000374946 IMUPQ9GZP8 106 aa13.9□□□□□ -0.18
TMEM235-201ENST00000374946 USP9YO00507 2555 aaPredicted RBP13.9□□□□□ -0.18
TMEM235-201ENST00000374946 IGLV5-45A0A087WSX0 123 aa13.89□□□□□ -0.19
TMEM235-201ENST00000374946 TIRAPP58753 221 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms