RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TRBV10-1A0A0K0K1A3 114 aa12.99□□□□□ -0.33
PTPRU-202ENST00000373779 MRGPRG-AS1Q2M3A8 158 aa12.99□□□□□ -0.33
PTPRU-202ENST00000373779 F8W735 103 aaPredicted RBP12.99□□□□□ -0.33
PTPRU-202ENST00000373779 CFAP126Q5VTH2 177 aa12.99□□□□□ -0.33
PTPRU-202ENST00000373779 MIR7-3HGQ8N6C7 128 aa12.99□□□□□ -0.33
PTPRU-202ENST00000373779 RNF183Q96D59 192 aa12.99□□□□□ -0.33
PTPRU-202ENST00000373779 NACAE9PAV3 2078 aa12.99□□□□□ -0.33
PTPRU-202ENST00000373779 KLLNB2CW77 178 aa12.99□□□□□ -0.33
PTPRU-202ENST00000373779 POLR2KP53803 58 aaKnown RBP12.98□□□□□ -0.33
PTPRU-202ENST00000373779 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
PTPRU-202ENST00000373779 SPG11Q96JI7 2443 aa12.98□□□□□ -0.33
PTPRU-202ENST00000373779 TET2Q6N021 2002 aaPredicted RBP12.98□□□□□ -0.33
PTPRU-202ENST00000373779 HIST2H2BCQ6DN03 193 aa12.98□□□□□ -0.33
PTPRU-202ENST00000373779 CDKN2A-AS1Q9UH64 79 aa12.98□□□□□ -0.33
PTPRU-202ENST00000373779 SPATA25Q9BR10 227 aa12.97□□□□□ -0.33
PTPRU-202ENST00000373779 TRIAP1O43715 76 aa12.97□□□□□ -0.33
PTPRU-202ENST00000373779 RAI1Q7Z5J4 1906 aaPredicted RBP12.97□□□□□ -0.33
PTPRU-202ENST00000373779 PSMG3-AS1Q96PY0 264 aa12.97□□□□□ -0.33
PTPRU-202ENST00000373779 TSHBP01222 138 aa12.97□□□□□ -0.33
PTPRU-202ENST00000373779 TRBV30A0A0K0K1B3 111 aa12.96□□□□□ -0.33
PTPRU-202ENST00000373779 SPANXCQ9NY87 97 aa12.96□□□□□ -0.33
PTPRU-202ENST00000373779 COX7A2LO14548 114 aa12.96□□□□□ -0.34
PTPRU-202ENST00000373779 SMIM20Q8N5G0 67 aa12.96□□□□□ -0.34
PTPRU-202ENST00000373779 LECT2O14960 151 aa12.95□□□□□ -0.34
PTPRU-202ENST00000373779 IGKV3D-7A0A0C4DH55 119 aa12.95□□□□□ -0.34
PTPRU-202ENST00000373779 PYGO1Q9Y3Y4 419 aa12.95□□□□□ -0.34
PTPRU-202ENST00000373779 ATOX1O00244 68 aa12.95□□□□□ -0.34
PTPRU-202ENST00000373779 Q6ZS46 218 aa12.95□□□□□ -0.34
PTPRU-202ENST00000373779 ARHGAP32A7KAX9 2087 aa12.95□□□□□ -0.34
PTPRU-202ENST00000373779 PTPRQQ9UMZ3 2332 aa12.94□□□□□ -0.34
PTPRU-202ENST00000373779 NDUFV3P56181 108 aaKnown RBP12.94□□□□□ -0.34
PTPRU-202ENST00000373779 C10orf99Q6UWK7 81 aa12.94□□□□□ -0.34
PTPRU-202ENST00000373779 PROK1P58294 105 aa12.94□□□□□ -0.34
PTPRU-202ENST00000373779 NKAPP1Q8N9T2 125 aa12.94□□□□□ -0.34
PTPRU-202ENST00000373779 F8WEM9 126 aa12.93□□□□□ -0.34
PTPRU-202ENST00000373779 RBMY1FQ15415 496 aaKnown RBP12.93□□□□□ -0.34
PTPRU-202ENST00000373779 C9orf85Q96MD7 179 aa12.93□□□□□ -0.34
PTPRU-202ENST00000373779 FAM208BQ5VWN6 2430 aa12.93□□□□□ -0.34
PTPRU-202ENST00000373779 IGLV10-54A0A075B6I4 117 aa12.93□□□□□ -0.34
PTPRU-202ENST00000373779 Q9HAA7 133 aa12.93□□□□□ -0.34
PTPRU-202ENST00000373779 PSMB8P28062 276 aa12.93□□□□□ -0.34
PTPRU-202ENST00000373779 INSL3P51460 131 aa12.93□□□□□ -0.34
PTPRU-202ENST00000373779 CDSNQ15517 529 aa12.92□□□□□ -0.34
PTPRU-202ENST00000373779 Q6ZTI0 123 aa12.92□□□□□ -0.34
PTPRU-202ENST00000373779 IGIPA6NJ69 53 aa12.92□□□□□ -0.34
PTPRU-202ENST00000373779 LINC00643Q86TS7 51 aa12.92□□□□□ -0.34
PTPRU-202ENST00000373779 CRYGDP07320 174 aa12.91□□□□□ -0.34
PTPRU-202ENST00000373779 NDUFA1O15239 70 aa12.91□□□□□ -0.34
PTPRU-202ENST00000373779 Q6YL49 198 aa12.91□□□□□ -0.34
PTPRU-202ENST00000373779 HIST2H2BDQ6DRA6 164 aa12.91□□□□□ -0.34
PTPRU-202ENST00000373779 LINC00308Q8TCZ7 52 aa12.91□□□□□ -0.34
PTPRU-202ENST00000373779 A0A1B0GX51 115 aa12.91□□□□□ -0.34
PTPRU-202ENST00000373779 DCANP1Q8TF63 244 aa12.91□□□□□ -0.34
PTPRU-202ENST00000373779 PCNTO95613 3336 aa12.91□□□□□ -0.34
PTPRU-202ENST00000373779 IGLV1-40P01703 118 aa12.9□□□□□ -0.34
PTPRU-202ENST00000373779 TIRAPP58753 221 aa12.9□□□□□ -0.34
PTPRU-202ENST00000373779 MRPL23Q16540 153 aaKnown RBP12.9□□□□□ -0.34
PTPRU-202ENST00000373779 IGLV2-18A0A075B6J9 118 aa12.9□□□□□ -0.34
PTPRU-202ENST00000373779 PRB1P04280 392 aa12.9□□□□□ -0.34
PTPRU-202ENST00000373779 DEFB114Q30KQ6 69 aa12.89□□□□□ -0.35
PTPRU-202ENST00000373779 CITED1Q99966 193 aa12.89□□□□□ -0.35
PTPRU-202ENST00000373779 CITED2Q99967 270 aaPredicted RBP12.88□□□□□ -0.35
PTPRU-202ENST00000373779 A8MZ25 164 aa12.88□□□□□ -0.35
PTPRU-202ENST00000373779 JMJD7-PLA2G4BH0Y9G9 81 aa12.88□□□□□ -0.35
PTPRU-202ENST00000373779 PRORYQ9H606 182 aa12.88□□□□□ -0.35
PTPRU-202ENST00000373779 PIEZO2Q9H5I5 2752 aa12.87□□□□□ -0.35
PTPRU-202ENST00000373779 C3orf56Q8N813 242 aa12.87□□□□□ -0.35
PTPRU-202ENST00000373779 IGLV4-69A0A075B6H9 119 aa12.86□□□□□ -0.35
PTPRU-202ENST00000373779 CXCL5P42830 114 aa12.86□□□□□ -0.35
PTPRU-202ENST00000373779 TIMM17BO60830 172 aa12.86□□□□□ -0.35
PTPRU-202ENST00000373779 C14orf132Q9NPU4 83 aa12.86□□□□□ -0.35
PTPRU-202ENST00000373779 NCR3O14931 201 aa12.86□□□□□ -0.35
PTPRU-202ENST00000373779 ATP5G1P05496 136 aa12.86□□□□□ -0.35
PTPRU-202ENST00000373779 XGP55808 180 aa12.86□□□□□ -0.35
PTPRU-202ENST00000373779 UBE2D1P51668 147 aa12.85□□□□□ -0.35
PTPRU-202ENST00000373779 UBE2D4Q9Y2X8 147 aa12.85□□□□□ -0.35
PTPRU-202ENST00000373779 C9orf66Q5T8R8 295 aa12.84□□□□□ -0.35
PTPRU-202ENST00000373779 ESM1Q9NQ30 184 aa12.84□□□□□ -0.35
PTPRU-202ENST00000373779 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
PTPRU-202ENST00000373779 DNAJC9-AS1A6NH13 148 aa12.83□□□□□ -0.35
PTPRU-202ENST00000373779 CRIP2P52943 208 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-202ENST00000373779 PIK3CD-AS1Q5SR53 167 aa12.83□□□□□ -0.36
PTPRU-202ENST00000373779 ACACBO00763 2458 aa12.83□□□□□ -0.36
PTPRU-202ENST00000373779 CSPG4Q6UVK1 2322 aa12.83□□□□□ -0.36
PTPRU-202ENST00000373779 H7C423 109 aa12.82□□□□□ -0.36
PTPRU-202ENST00000373779 UBE2DNLQ8IWF7 75 aa12.82□□□□□ -0.36
PTPRU-202ENST00000373779 MRPS36P82909 103 aaKnown RBP12.82□□□□□ -0.36
PTPRU-202ENST00000373779 LST1O00453 97 aa12.82□□□□□ -0.36
PTPRU-202ENST00000373779 TMEM256-PLSCR3K7ERE1 68 aa12.81□□□□□ -0.36
PTPRU-202ENST00000373779 PSCAO43653 123 aa12.81□□□□□ -0.36
PTPRU-202ENST00000373779 SPART-AS1P0CW21 52 aa12.81□□□□□ -0.36
PTPRU-202ENST00000373779 EDN2P20800 178 aa12.81□□□□□ -0.36
PTPRU-202ENST00000373779 CAMK2N2Q96S95 79 aa12.81□□□□□ -0.36
PTPRU-202ENST00000373779 PRO0255Q9UI72 69 aa12.81□□□□□ -0.36
PTPRU-202ENST00000373779 TSPEAR-AS2P59090 65 aa12.81□□□□□ -0.36
PTPRU-202ENST00000373779 ZNF702PQ9H963 129 aa12.81□□□□□ -0.36
PTPRU-202ENST00000373779 SPAG11BQ08648 103 aa12.8□□□□□ -0.36
PTPRU-202ENST00000373779 IGKV2D-24A0A075B6R9 120 aa12.79□□□□□ -0.36
PTPRU-202ENST00000373779 J3KT08 172 aa12.79□□□□□ -0.36
PTPRU-202ENST00000373779 UBE2D3P61077 147 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms