RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 FASNP49327 2511 aaKnown RBP3.54□□□□□ -1.84
SGIP1-204ENST00000371039 HOXA3O43365 443 aaPredicted RBP3.54□□□□□ -1.84
SGIP1-204ENST00000371039 IGHV3-33P01772 117 aa3.54□□□□□ -1.84
SGIP1-204ENST00000371039 VMO1Q7Z5L0 202 aa3.54□□□□□ -1.84
SGIP1-204ENST00000371039 DPM3Q9P2X0 92 aa3.54□□□□□ -1.84
SGIP1-204ENST00000371039 CHD6Q8TD26 2715 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 CRYGAP11844 174 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 IGHV4OR15-8A0A075B7B6 117 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 A0A087WW49 117 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.53□□□□□ -1.84
SGIP1-204ENST00000371039 WFDC11Q8NEX6 87 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 LINC01560Q8TB33 94 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 DLX4Q92988 240 aaPredicted RBP3.53□□□□□ -1.84
SGIP1-204ENST00000371039 SPTAN1Q13813 2472 aaKnown RBP3.53□□□□□ -1.84
SGIP1-204ENST00000371039 ZNF815PA8K554 130 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 PSMB2P49721 201 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 DSCR8Q96T75 97 aa3.53□□□□□ -1.84
SGIP1-204ENST00000371039 TRAV13-1A0A0B4J241 112 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 TEX49A0A1B0GTD5 131 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 SLC50A1Q9BRV3 221 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 PTPRQQ9UMZ3 2332 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 NCBP2LA6PVI3 153 aaKnown RBP3.52□□□□□ -1.85
SGIP1-204ENST00000371039 CCL24O00175 119 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 TRACP01848 142 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 SCGB3A1Q96QR1 104 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 SPANXDQ9BXN6 97 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 BAHCC1Q9P281 2608 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 KLLNB2CW77 178 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 K7EMT4 169 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 RBMY1A1P0DJD3 496 aaKnown RBP3.52□□□□□ -1.85
SGIP1-204ENST00000371039 RBMY1CP0DJD4 496 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 APOC4P55056 127 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 PLGLAQ15195 96 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 RBMY1FQ15415 496 aaKnown RBP3.52□□□□□ -1.85
SGIP1-204ENST00000371039 SUMO4Q6EEV6 95 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 CLEC19AQ6UXS0 136 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 LINC00527Q9UJ94 153 aa3.52□□□□□ -1.85
SGIP1-204ENST00000371039 NBASA2RRP1 2371 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 HIVEP3Q5T1R4 2406 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 FAM240AA0A1B0GVK7 77 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 TMEM223A0PJW6 202 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 M0R381 172 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 MYOZ3Q8TDC0 251 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 SMCR5Q8TEV8 140 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 CENPEQ02224 2701 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 PSMG4Q5JS54 123 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 USP24Q9UPU5 2620 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 TRBV27A0A0K0K1C4 114 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 TRIAP1O43715 76 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 GNLYP22749 145 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 SDIM1Q6ZPB5 146 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 C5orf56Q8N8D9 126 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 CYSTM1Q9H1C7 97 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 COL6A6A6NMZ7 2263 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 SORL1Q92673 2214 aa3.51□□□□□ -1.85
SGIP1-204ENST00000371039 PRM2P04554 102 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 ZNF22P17026 224 aaPredicted RBP3.5□□□□□ -1.85
SGIP1-204ENST00000371039 PSMB8P28062 276 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 SRSF9Q13242 221 aaKnown RBP eCLIP3.5□□□□□ -1.85
SGIP1-204ENST00000371039 BEAN1Q3B7T3 259 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 C9orf139Q6ZV77 190 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 SPTA1P02549 2419 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 CSMD3Q7Z407 3707 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 AKAP6Q13023 2319 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 TEX15Q9BXT5 2789 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 M0QY20 66 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 M0R1W7 72 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 C16orf95Q9H693 158 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 H7C423 109 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 COX7CP15954 63 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 MUSTN1Q8IVN3 82 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 DCANP1Q8TF63 244 aa3.5□□□□□ -1.85
SGIP1-204ENST00000371039 PROK1P58294 105 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 DAZ2Q13117 558 aaKnown RBP3.49□□□□□ -1.85
SGIP1-204ENST00000371039 DEFB121Q5J5C9 76 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 CEMP1Q6PRD7 247 aaPredicted RBP3.49□□□□□ -1.85
SGIP1-204ENST00000371039 Q6ZSN1 163 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 DAZ4Q86SG3 579 aaKnown RBP3.49□□□□□ -1.85
SGIP1-204ENST00000371039 C15orf53Q8NAA6 179 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 DPH3P1Q9H4G8 78 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 DAZ1Q9NQZ3 744 aaKnown RBP3.49□□□□□ -1.85
SGIP1-204ENST00000371039 DAZ3Q9NR90 486 aaKnown RBP3.49□□□□□ -1.85
SGIP1-204ENST00000371039 LOC107984156A0A0G2JMH3 177 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 ADARB2-AS1A8MUL3 147 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 LGALS9O00182 355 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 ORMDL2Q53FV1 153 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 SPANXN1Q5VSR9 72 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 ARL17AQ8IVW1 177 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 C10orf105Q8TEF2 133 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 APCP25054 2843 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 SLC25A20O43772 301 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 ATP5G1P05496 136 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 ECSCRQ19T08 205 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 EEF1AKMT3Q96AZ1 226 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 DYNLRB1Q9NP97 96 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 PRO1854Q9UHT4 67 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 KMT2BQ9UMN6 2715 aaPredicted RBP3.49□□□□□ -1.85
SGIP1-204ENST00000371039 IGLV4-3A0A075B6K6 122 aa3.49□□□□□ -1.85
SGIP1-204ENST00000371039 A0A0J9YXY3 114 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms