RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 NISCHQ9Y2I1 1504 aa9.73□□□□□ -0.85
SGIP1-204ENST00000371039 MYO15BQ96JP2 1530 aa8.48□□□□□ -1.05
SGIP1-204ENST00000371039 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
SGIP1-204ENST00000371039 ZCCHC6Q5VYS8 1495 aaKnown RBP8.31□□□□□ -1.08
SGIP1-204ENST00000371039 HRCP23327 699 aa8.28□□□□□ -1.08
SGIP1-204ENST00000371039 CHIC1Q5VXU3 224 aa8.21□□□□□ -1.1
SGIP1-204ENST00000371039 PPARGC1BQ86YN6 1023 aaKnown RBP8.21□□□□□ -1.1
SGIP1-204ENST00000371039 SUPT5HO00267 1087 aaKnown RBP8.2□□□□□ -1.1
SGIP1-204ENST00000371039 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
SGIP1-204ENST00000371039 CCDC180Q9P1Z9 1646 aa8.16□□□□□ -1.1
SGIP1-204ENST00000371039 MYT1Q01538 1121 aa8.1□□□□□ -1.11
SGIP1-204ENST00000371039 PELP1Q8IZL8 1130 aaKnown RBP8.1□□□□□ -1.11
SGIP1-204ENST00000371039 PCGF6Q9BYE7 350 aa8.08□□□□□ -1.12
SGIP1-204ENST00000371039 DCAF1Q9Y4B6 1507 aa8.06□□□□□ -1.12
SGIP1-204ENST00000371039 LOC105371045A0A1W2PR82 267 aa8.01□□□□□ -1.13
SGIP1-204ENST00000371039 TTBK1Q5TCY1 1321 aaPredicted RBP7.94□□□□□ -1.14
SGIP1-204ENST00000371039 ABCC9O60706 1549 aa7.9□□□□□ -1.14
SGIP1-204ENST00000371039 SCAF1Q9H7N4 1312 aaKnown RBP7.87□□□□□ -1.15
SGIP1-204ENST00000371039 PRKCSHP14314 528 aaPredicted RBP7.85□□□□□ -1.15
SGIP1-204ENST00000371039 RB1CC1Q8TDY2 1594 aa7.83□□□□□ -1.16
SGIP1-204ENST00000371039 TRIM26Q12899 539 aaPredicted RBP7.82□□□□□ -1.16
SGIP1-204ENST00000371039 RSF1Q96T23 1441 aaPredicted RBP7.8□□□□□ -1.16
SGIP1-204ENST00000371039 EIF4G1Q04637 1599 aaKnown RBP7.77□□□□□ -1.17
SGIP1-204ENST00000371039 APLP2Q06481 763 aa7.73□□□□□ -1.17
SGIP1-204ENST00000371039 SCRIBQ14160 1630 aa7.7□□□□□ -1.18
SGIP1-204ENST00000371039 DCAF8L2P0C7V8 631 aa7.7□□□□□ -1.18
SGIP1-204ENST00000371039 ERICH6Q7L0X2 663 aa7.68□□□□□ -1.18
SGIP1-204ENST00000371039 DAXXQ9UER7 740 aaPredicted RBP7.67□□□□□ -1.18
SGIP1-204ENST00000371039 CECR2Q9BXF3 1484 aa7.66□□□□□ -1.18
SGIP1-204ENST00000371039 MROH2BQ7Z745 1585 aa7.64□□□□□ -1.19
SGIP1-204ENST00000371039 WIZO95785 1651 aa7.64□□□□□ -1.19
SGIP1-204ENST00000371039 NEUROD1Q13562 356 aa7.63□□□□□ -1.19
SGIP1-204ENST00000371039 NACADO15069 1562 aa7.59□□□□□ -1.2
SGIP1-204ENST00000371039 FAM9AQ8IZU1 332 aaPredicted RBP7.57□□□□□ -1.2
SGIP1-204ENST00000371039 ZEB1P37275 1124 aaPredicted RBP7.56□□□□□ -1.2
SGIP1-204ENST00000371039 ACIN1Q9UKV3 1341 aaKnown RBP7.56□□□□□ -1.2
SGIP1-204ENST00000371039 TRIM41Q8WV44 630 aa7.56□□□□□ -1.2
SGIP1-204ENST00000371039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.55□□□□□ -1.2
SGIP1-204ENST00000371039 BAZ1AQ9NRL2 1556 aaPredicted RBP7.54□□□□□ -1.2
SGIP1-204ENST00000371039 ABCC8Q09428 1581 aa7.53□□□□□ -1.2
SGIP1-204ENST00000371039 EHMT2Q96KQ7 1210 aa7.52□□□□□ -1.21
SGIP1-204ENST00000371039 WRNQ14191 1432 aaPredicted RBP eCLIP7.51□□□□□ -1.21
SGIP1-204ENST00000371039 CCDC88BA6NC98 1476 aa7.51□□□□□ -1.21
SGIP1-204ENST00000371039 RUSC2Q8N2Y8 1516 aa7.49□□□□□ -1.21
SGIP1-204ENST00000371039 GTF3C3Q9Y5Q9 886 aa7.47□□□□□ -1.21
SGIP1-204ENST00000371039 SOGA1O94964 1423 aa7.46□□□□□ -1.22
SGIP1-204ENST00000371039 SMARCA2P51531 1590 aa7.46□□□□□ -1.22
SGIP1-204ENST00000371039 UNC13AQ9UPW8 1703 aa7.45□□□□□ -1.22
SGIP1-204ENST00000371039 CEP162Q5TB80 1403 aa7.43□□□□□ -1.22
SGIP1-204ENST00000371039 DIEXFQ68CQ4 756 aaKnown RBP7.42□□□□□ -1.22
SGIP1-204ENST00000371039 TOP2AP11388 1531 aaKnown RBP7.41□□□□□ -1.22
SGIP1-204ENST00000371039 SMARCA4P51532 1647 aa7.39□□□□□ -1.23
SGIP1-204ENST00000371039 CCER1Q8TC90 406 aaPredicted RBP7.36□□□□□ -1.23
SGIP1-204ENST00000371039 TNIKQ9UKE5 1360 aa7.36□□□□□ -1.23
SGIP1-204ENST00000371039 MIER1Q8N108 512 aa7.35□□□□□ -1.23
SGIP1-204ENST00000371039 SYNJ1O43426 1573 aa7.35□□□□□ -1.23
SGIP1-204ENST00000371039 BCL11AQ9H165 835 aa7.34□□□□□ -1.23
SGIP1-204ENST00000371039 ZNF316A6NFI3 1004 aaPredicted RBP7.31□□□□□ -1.24
SGIP1-204ENST00000371039 KIF21BO75037 1637 aa7.3□□□□□ -1.24
SGIP1-204ENST00000371039 BICRAQ9NZM4 1560 aa7.28□□□□□ -1.24
SGIP1-204ENST00000371039 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
SGIP1-204ENST00000371039 PEG3Q9GZU2 1588 aa7.27□□□□□ -1.25
SGIP1-204ENST00000371039 CLIP1P30622 1438 aa7.27□□□□□ -1.25
SGIP1-204ENST00000371039 GOLGA3Q08378 1498 aa7.25□□□□□ -1.25
SGIP1-204ENST00000371039 RAPGEF2Q9Y4G8 1499 aa7.25□□□□□ -1.25
SGIP1-204ENST00000371039 NCBP3Q53F19 620 aaKnown RBP7.24□□□□□ -1.25
SGIP1-204ENST00000371039 PABPN1Q86U42 306 aaKnown RBP eCLIP7.24□□□□□ -1.25
SGIP1-204ENST00000371039 YTHDC1Q96MU7 727 aaKnown RBP7.23□□□□□ -1.25
SGIP1-204ENST00000371039 CSRNP3Q8WYN3 585 aa7.23□□□□□ -1.25
SGIP1-204ENST00000371039 DHX57Q6P158 1386 aaKnown RBP7.22□□□□□ -1.25
SGIP1-204ENST00000371039 EEA1Q15075 1411 aa7.22□□□□□ -1.25
SGIP1-204ENST00000371039 VPS8Q8N3P4 1428 aa7.22□□□□□ -1.25
SGIP1-204ENST00000371039 CENPBP07199 599 aaPredicted RBP7.22□□□□□ -1.25
SGIP1-204ENST00000371039 ARAP1Q96P48 1450 aa7.21□□□□□ -1.25
SGIP1-204ENST00000371039 KCNH8Q96L42 1107 aa7.2□□□□□ -1.26
SGIP1-204ENST00000371039 SUPT16HQ9Y5B9 1047 aaKnown RBP7.2□□□□□ -1.26
SGIP1-204ENST00000371039 CUX2O14529 1486 aa7.19□□□□□ -1.26
SGIP1-204ENST00000371039 MAPKBP1O60336 1514 aa7.19□□□□□ -1.26
SGIP1-204ENST00000371039 DNAJC5BQ9UF47 199 aa7.19□□□□□ -1.26
SGIP1-204ENST00000371039 CEP164Q9UPV0 1460 aa7.18□□□□□ -1.26
SGIP1-204ENST00000371039 BIVM-ERCC5R4GMW8 1640 aa7.18□□□□□ -1.26
SGIP1-204ENST00000371039 BAZ1BQ9UIG0 1483 aaKnown RBP7.18□□□□□ -1.26
SGIP1-204ENST00000371039 TSHZ2Q9NRE2 1034 aa7.17□□□□□ -1.26
SGIP1-204ENST00000371039 HNRNPUL2Q1KMD3 747 aaKnown RBP7.17□□□□□ -1.26
SGIP1-204ENST00000371039 TOP2BQ02880 1626 aa7.17□□□□□ -1.26
SGIP1-204ENST00000371039 KANK4Q5T7N3 995 aaPredicted RBP7.15□□□□□ -1.26
SGIP1-204ENST00000371039 PRXQ9BXM0 1461 aa7.15□□□□□ -1.27
SGIP1-204ENST00000371039 PLPPR3Q6T4P5 718 aa7.15□□□□□ -1.27
SGIP1-204ENST00000371039 RRBP1Q9P2E9 1410 aaKnown RBP7.14□□□□□ -1.27
SGIP1-204ENST00000371039 PLEKHG5O94827 1062 aa7.11□□□□□ -1.27
SGIP1-204ENST00000371039 UBTFP17480 764 aaKnown RBP7.11□□□□□ -1.27
SGIP1-204ENST00000371039 RTN4Q9NQC3 1192 aaKnown RBP7.11□□□□□ -1.27
SGIP1-204ENST00000371039 ATAD2BQ9ULI0 1458 aa7.1□□□□□ -1.27
SGIP1-204ENST00000371039 ERICH3Q5RHP9 1530 aa7.1□□□□□ -1.27
SGIP1-204ENST00000371039 WDR97A6NE52 1622 aa7.1□□□□□ -1.27
SGIP1-204ENST00000371039 CUX1P39880 1505 aa7.09□□□□□ -1.27
SGIP1-204ENST00000371039 ARHGAP35Q9NRY4 1499 aa7.08□□□□□ -1.28
SGIP1-204ENST00000371039 KDM5BQ9UGL1 1544 aa7.08□□□□□ -1.28
SGIP1-204ENST00000371039 ARXQ96QS3 562 aa7.06□□□□□ -1.28
SGIP1-204ENST00000371039 CLSPNQ9HAW4 1339 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms